|
|
Properties
| Property Name | Value |
|---|
| Product | cellulase 2 |
| Orig transcript id | gnl|cribi|Naga_100043g22.7222.mrna |
| Orig protein id | gnl|cribi|Naga_100043g22.7222 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:182221..184086 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7534 ID=rna7534|Name=rna7534|organism=Nannochloropsis gaditana|type=mRNA|length=2973bp
AGGGGCCAGGAACTATGATAAAGAATGAAAATGTGACGGCGAGATGAGGT
GGACGCCAAAAGCAAAAAGGTCCATGCCCTTCGGATTGGCACGCGCACGC
CGTGTAATCAGTAACCGGGCAGGAGCGCGGCGCATCACCCTTCACCACAC
GCCACCCCATATTTTTTCATGCGGGCCAATACTTCATGGGATCGACAACA
TGGATCATTGGAGTGCTTGACAAAGTCCTCTTGTCGTCACAGTGCTGCTT
GAGATAAGTTTAGTCAGCCCAAAAGCATTGCCCAGGGAGGCAGAGGGCAA
CGCTTTCTCGCTTCGAGGACGTAACATCTTAAGAAATCACGAAGCAGACC
TTGAAGGCCGTCCAAGGAAAAAGTACGTTCTGGGGATACACCCGGGATAA
TGAAGCTATCCTACAACAGCCAACAACTGCGTTGTGCCGCGGATCGTGTG
ACGATTCGTGTCCTGGTCCCTCGCCCTCCGTCTTAAAAGTTTCTGAGTCG
GCCCCCTCGTAAAGAAAGCCAACCTCGCTGTGTTATTACCCCCATGCTGA
AAAAGTGTTCCGTCAGGCACCCTTACTCGTGCGCGCACGCATGCTTCGCC
GCGGTAGCATTATAACTAGCATAAGTCTGGAGCTGCTTACGTACCTGCAA
TTCTAGCGACCGGAATCGTGTGCAAAGGAGTGTGCGTGTTACTGCTGAAG
GACTCCGCTAGACTCATCACGGCAGTGAACCCAAGTCGTGTGAGCGACAT
TTTTCCCCACAAAAATTCGAGATTTCTGCGGACCTGCATTAAATCTGCAA
GCAAGTTATATTCTCTTCGCGAAAGCTTTGTGCTATAGGTGGATGCCTCT
TACATATGCCGCCTTCTTGTTAAATGAGGACTTCCGATCGAGAAGCCTTT
CGACTAGATGAAAACTTATGGCCCGTCTGCCTCAATCAGCTAACACATTC
TTCTTTGGCACTCAGGCTTAGCCATGGGCCTACTTAAAGTCTTCCACTTC
GCAAAAGAAGATGAGCCGGTAATTGTTAAAACCAAGCAAGGGAGAGTAGA
AGGGCGGAAGCGGAAGGACACAGGGGTCTGTGTCTTTCGCGGTATCCCAT
TTGCTGCCCCCCCCACAGGCTCTCGGCGGTTCAGAAAACCAGAGCCTTAT
CCGGCATGGGAGGGCGTGAAACTATGTGAAGACTTCGGTAAGACCGCTGT
GCAAGGCCTGAGCATCATAGTCCTGGCTTTTTTGCCAAAATTTCTCGCTG
CGCTTGCCTGGGGCTGCCTCTGGTTGACCAACTCCAATCCCATCTACAAC
CTGAATCCGAAGAGGCCTATGGCTCTACCGAGGTCGTGCTCGGAGGAGGA
GTGTTTAAACCTTACCGTGGAGACGCCATTCCTGCCGTTGGAAGGGGAAC
TCCGGGAGGATCATGAGGGCGACGGATCTGAAGGTCGAGAGACGAGGCTG
CTGCCTGTGATGGTTTGGATTCACGGTGGCGCATTTCAGCTCGGGGCAAA
TTCTCAATTCGTCTACCAGCCTCCAGAGTCATTCTTAGCGCGGAAAGGCG
TGGTGGTGGTCACGATCAACTACCGGCTTGGTATCCTGGGCTTTCTCAAG
GTCGAAGGAGGGGATTACAATTGTGGCATGTGGGACCAAGTAGCGGCGTT
GCAATGGGTACAGGAAAACATCGCGGCTTTCGGAGGCGACCCTGGAAACG
TGACAATATTCGGTGAGTCGGCAGGGGGCATGAGCTGCGGCTTCCTATCG
GCCACCGATTTCGCGGGCCGCCTCTTCCACCGCGTCATCTTGCAGTCGGG
CTCGATCCAGACGGGCCTTTCGCGAGAGGAGGCTGGCTGGCTGGCCGCGG
AGGGAGCGAGAGCCCTGGACATCTCCAAATGCTCTCTGGAGACCATGGGC
GACATACCCGCTCCTACTTTGCTGGCGGCACAGAACTTAGTCATACGAGG
AAAGAAATGTGGAATCATGCCCTTTCAACCCGTGGTAGATGGAGACCTCC
TGAAGGACCGCATCATCGACAAATGGAGAGCGGGTGTGGCAAGGAATCTA
GATTTTCTGATCTCCTATACGCGTCACGAAGAGCTACTATTTTTGAAACT
GTTCCCGGCGAATTACACATCAGAGACCGAGCAGAAGCTCCAGAAGCGCG
TCACGTTCTCTTTGAGCCCCCCCGTCATGGACGTACCGGACTTTGAGGCG
GCGGCCCAAAAAGTAGTCGCGGAGATCAAGGCCTGGGAGGGGGGTGGTAT
CCCGCCGTCACACGCCGACTACTGGACTTACAAGGCCGTAGACTTTAATT
CCGTGCTGAAATTTGCCATACCGAGTCATATAGCGGCTGAGACTTTAACC
GAAGCGCCTGGACGAGCCAAAAAAGTGTATCTCTGCCGCTTTGACATGCA
CTCTCCCACCATGAATGGAGCATGTCACGCCATCGATTTGGCATACGTAT
TCGGGTCTGTTAAGCCCATGTCGGGCGGTTTGTGTCCTGCTGATATCCCT
TCCAATGCAAGTTTAAGTGCGGCCGTCATCAGTGCATGGACCAACTTTGC
GAGGACGGGTGATCCAAATTTTCAGAGCGGGGAAGAAAAGAAGTACCTTG
ACATAGCTGACGCAGGTTCTGAGAGCACTGTGCTCCCAGACTGGCCTCAT
CTGACAGCCAGTGCTCCCCACCAGGTCATGATCTTAGACGTGCCATTGTC
CGCTTGTCGTATTCAAGAGGTCGATTTACATCTGACCTTTCCTGAGCTTT
GGAAGATTGTTCTGAAAAATGCTCGAGCCCTTTGGTTTCATCGACCTCCA
CCATCGGGTTCTAAGACTGAGAGAGCCATGCAATCCAATCTTTGAAAGCG
AAACTGTCCCTTTATAGCCTTGATATAAATTTCTCTAGAGCACGACTTAA
GAAGTACTCTGAAATAGAGGAGGGTTACGACGTGCAAAATGCAAAAATGA
AAGCGCGTATCAACTTCCGACGA back to topprotein sequence of rna7534 >rna7534-protein ID=rna7534-protein|Name=rna7534|organism=Nannochloropsis gaditana|type=polypeptide|length=578bp
MGWRVVKGDAPRSCPVTDYTACACQSEGHGPFCFWRPPHLAVTFSFFIIV
PGPSASNSSERSGGMLWAWGGALGTSFIFLVHLTQLVLSAEGFTLRSDLR
SDKSIHREFVYASEDIKLTLAKHNVYLLPQPPMPPLYAAKGTEFEDLTTE
KDFFHGPSRIPAFPADWCLGVGQEPKYTSENGSVMLNGNPLYLKGLNWYG
FEGELFVLDGLAVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLAN
IYVVQEDMRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGITDLWYD
ETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWN
AFATKSIQTLATRVPDFHGVFFVEGIERPRWNSPHAYWWGGNLEGVRKYP
ISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWI
EKSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPA
TEFNGGLLARDYQAVDKNVLQMLHYVQPKPTTFHGGIGAGDPLCVVDGAF
ANVRCAVKMGLPISTSMAALMAEKERQP back to topmRNA from alignment at CM002472.1:182221..184086+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7534 ID=rna7534|Name=rna7534|organism=Nannochloropsis gaditana|type=mRNA|length=1866bp|location=Sequence derived from alignment at CM002472.1:182221..184086+ (Nannochloropsis gaditana)
ATGGGGTGGCGTGTGGTGAAGGGTGATGCGCCGCGCTCCTGCCCGGTTAC
TGATTACACGGCGTGCGCGTGCCAATCCGAAGGGCATGGACCTTTTTGCT
TTTGGCGTCCACCTCATCTCGCCGTCACATTTTCATTCTTTATCATAGTT
CCTGGCCCCTCTGCTTCAAATTCGTCAGAGCGCTCTGGGGGAATGCTTTG
GGCATGGGGGGGTGCCCTGGGGACAAGCTTCATTTTCTTGGTGCATCTAA
CGCAGCTAGTGCTTTCAGCCGAGGGCTTCACATTGCGCAGTGACTTGAGA
AGCGACAAATCAATTCACCGAGAATTTGTGTACGCGTCGGAAGACATTAA
GCTGACCCTGGCCAAGCACAATGTATACTTACTACCCCAGCCGCCGATGC
CTCCTTTGTATGCTGCCAAGGGCACGGAGTTTGAAGATCTTACCACAGAG
AAGGATTTCTTTCATGGTCCATCCAGAATCCCTGCTTTTCCGGCAGATTG
GTGCCTTGGTGTTGGACAAGAACCTAAGTATACCTCTGAGAACGGTTCTG
TCATGCTGAATGGGAACCCACTCTACCTAAAGGGGCTAAATTGGTGAGCA
CGCATAAATTGCATCTACGAGGCCCGCAGCCGCATCGCTTCATGTCTTGC
TTGAAAGTGTAATGgtctcgtctccctcctaaAGGCGTCTGAGTCCCtgt
cccctcgctccctccctggcagGTATGGCTTCGAAGGAGAGCTCTTTGTG
CTCGACGGGCTGGCGGTGTGGTCACCAGAGCGGTTCATGAGCTTTCTAGC
AAGTCACCGCTTCAATGCTCTGCGCCTACCTTTTAGCCTGGAGTGGCTTG
CCAGAGGCCTCGACTCCCCGCTAGCCAACATCTACGTAGTGCAGGAGGAC
ATGCGCGGCCTTACGCAAGGCCAGGTTATGGATCGGATCTTTGACGCCGC
GGCCGCCCAAGGCATCCTCATTCTACTTGACTTGCACGTTATTTCGGTAG
AGAAGGGCATAACTGACCTGTGGTACGACGAGACCGCAGACGGAGCGCTT
GTTCTCGACCTCTGGACGCTTCTGCTTCGCCGATTTGCGGGGCGCTGGAA
TCTCCTGGGCATCGACCTGAAGAACGAGCCCCACGGCATTGCCAGCTGGG
GCCACGGGCACCCCAAGACGGACTGGAATGCGTTCGCCACCAAAAGCATC
CAGACCCTGGCAACCCGCGTGCCCGACTTTCACGGAGTCTTCTTTGTGGA
GGGCATAGAAAGACCCCGGTGGAATAGTCCCCACGCCTACTGGTGGGGTG
GGAACTTGGAAGGCGTGCGGAAGTACCCAATCTCCACGGGCAGCGAGGAT
CTGGACAGACGTGTGGTCTACTCGCCGCATATCTACGGGCCCGAAGTGTT
CCCTAGGCATCGCTACTTTCAGGACTCCCGCTTTCCCGACAACATGCCTG
GCATATGGGACCATCAGTTCGGTTGGATTGAGAAATCGACGGGCCGAGCC
GTCGTCCTCGGGGAATGGGGAGGCAGTATTGTAGGCGACAGGAAGGCGGC
CGCGAACCAGCAGAAGCTCGCGGAGTGGCTGGTGCATGCCTGCATCCCCG
ACAACTTTTGGTGGTGCTTGAATCCTGCCACTGAGTTCAACGGGGGTCTG
CTGGCCAGGGATTACCAGGCGGTCGACAAAAATGTGCTGCAAATGCTTCA
CTACGTGCAGCCCAAGCCCACTACCTTCCACGGCGGCATCGGTGCGGGTG
ATCCCCTCTGCGTTGTGGATGGCGCCTTCGCGAATGTCAGGTGTGCTGTG
AAGATGGGCCTGCCTATTTCTACAAGTATGGCTGCCCTGATGGCCGAGAA
AGAGCGGCAACCCTAA back to topCoding sequence (CDS) from alignment at CM002472.1:182221..184086+ >rna7534 ID=rna7534|Name=rna7534|organism=Nannochloropsis gaditana|type=CDS|length=3474bp|location=Sequence derived from alignment at CM002472.1:182221..184086+ (Nannochloropsis gaditana)
ATGGGGTGGCGTGTGGTGAAGGGTGATGCGCCGCGCTCCTGCCCGGTTAC
TGATTACACGGCGTGCGCGTGCCAATCCGAAGGGCATGGACCTTTTTGCT
TTTGGCGTCCACCTCATCTCGCCGTCACATTTTCATTCTTTATCATAGTT
CCTGGCCCCTCTGCTTCAAATTCGTCAGAGCGCTCTGGGGGAATGCTTTG
GGCATGGGGGGGTGCCCTGGGGACAAGCTTCATTTTCTTGGTGCATCTAA
CGCAGCTAGTGCTTTCAGCCGAGGGCTTCACATTGCGCAGTGACTTGAGA
AGCGACAAATCAATTCACCGAGAATTTGTGTACGCGTCGGAAGACATTAA
GCTGACCCTGGCCAAGCACAATGTATACTTACTACCCCAGCCGCCGATGC
CTCCTTTGTATGCTGCCAAGGGCACGGAGTTTGAAGATCTTACCACAGAG
AAGGATTTCTTTCATGGTCCATCCAGAATCCCTGCTTTTCCGGCAGATTG
GTGCCTTGGTGTTGGACAAGAACCTAAGTATACCTCTGAGAACGGTTCTG
TCATGCTGAATGGGAACCCACTCTACCTAAAGGGGCTAAATTGGTATGGC
TTCGAAGGAGAGCTCTTTGTGCTCGACGGGCTGGCGGTGTGGTCACCAGA
GCGGTTCATGAGCTTTCTAGCAAGTCACCGCTTCAATGCTCTGCGCCTAC
CTTTTAGCCTGGAGTGGCTTGCCAGAGGCCTCGACTCCCCGCTAGCCAAC
ATCTACGTAGTGCAGGAGGACATGCGCGGCCTTACGCAAGGCCAGGTTAT
GGATCGGATCTTTGACGCCGCGGCCGCCCAAGGCATCCTCATTCTACTTG
ACTTGCACGTTATTTCGGTAGAGAAGGGCATAACTGACCTGTGGTACGAC
GAGACCGCAGACGGAGCGCTTGTTCTCGACCTCTGGACGCTTCTGCTTCG
CCGATTTGCGGGGCGCTGGAATCTCCTGGGCATCGACCTGAAGAACGAGC
CCCACGGCATTGCCAGCTGGGGCCACGGGCACCCCAAGACGGACTGGAAT
GCGTTCGCCACCAAAAGCATCCAGACCCTGGCAACCCGCGTGCCCGACTT
TCACGGAGTCTTCTTTGTGGAGGGCATAGAAAGACCCCGGTGGAATAGTC
CCCACGCCTACTGGTGGGGTGGGAACTTGGAAGGCGTGCGGAAGTACCCA
ATCTCCACGGGCAGCGAGGATCTGGACAGACGTGTGGTCTACTCGCCGCA
TATCTACGGGCCCGAAGTGTTCCCTAGGCATCGCTACTTTCAGGACTCCC
GCTTTCCCGACAACATGCCTGGCATATGGGACCATCAGTTCGGTTGGATT
GAGAAATCGACGGGCCGAGCCGTCGTCCTCGGGGAATGGGGAGGCAGTAT
TGTAGGCGACAGGAAGGCGGCCGCGAACCAGCAGAAGCTCGCGGAGTGGC
TGGTGCATGCCTGCATCCCCGACAACTTTTGGTGGTGCTTGAATCCTGCC
ACTGAGTTCAACGGGGGTCTGCTGGCCAGGGATTACCAGGCGGTCGACAA
AAATGTGCTGCAAATGCTTCACTACGTGCAGCCCAAGCCCACTACCTTCC
ACGGCGGCATCGGTGCGGGTGATCCCCTCTGCGTTGTGGATGGCGCCTTC
GCGAATGTCAGGTGTGCTGTGAAGATGGGCCTGCCTATTTCTACAAGTAT
GGCTGCCCTGATGGCCGAGAAAGAGCGGCAACCCTAAATGGGGTGGCGTG
TGGTGAAGGGTGATGCGCCGCGCTCCTGCCCGGTTACTGATTACACGGCG
TGCGCGTGCCAATCCGAAGGGCATGGACCTTTTTGCTTTTGGCGTCCACC
TCATCTCGCCGTCACATTTTCATTCTTTATCATAGTTCCTGGCCCCTCTG
CTTCAAATTCGTCAGAGCGCTCTGGGGGAATGCTTTGGGCATGGGGGGGT
GCCCTGGGGACAAGCTTCATTTTCTTGGTGCATCTAACGCAGCTAGTGCT
TTCAGCCGAGGGCTTCACATTGCGCAGTGACTTGAGAAGCGACAAATCAA
TTCACCGAGAATTTGTGTACGCGTCGGAAGACATTAAGCTGACCCTGGCC
AAGCACAATGTATACTTACTACCCCAGCCGCCGATGCCTCCTTTGTATGC
TGCCAAGGGCACGGAGTTTGAAGATCTTACCACAGAGAAGGATTTCTTTC
ATGGTCCATCCAGAATCCCTGCTTTTCCGGCAGATTGGTGCCTTGGTGTT
GGACAAGAACCTAAGTATACCTCTGAGAACGGTTCTGTCATGCTGAATGG
GAACCCACTCTACCTAAAGGGGCTAAATTGGTATGGCTTCGAAGGAGAGC
TCTTTGTGCTCGACGGGCTGGCGGTGTGGTCACCAGAGCGGTTCATGAGC
TTTCTAGCAAGTCACCGCTTCAATGCTCTGCGCCTACCTTTTAGCCTGGA
GTGGCTTGCCAGAGGCCTCGACTCCCCGCTAGCCAACATCTACGTAGTGC
AGGAGGACATGCGCGGCCTTACGCAAGGCCAGGTTATGGATCGGATCTTT
GACGCCGCGGCCGCCCAAGGCATCCTCATTCTACTTGACTTGCACGTTAT
TTCGGTAGAGAAGGGCATAACTGACCTGTGGTACGACGAGACCGCAGACG
GAGCGCTTGTTCTCGACCTCTGGACGCTTCTGCTTCGCCGATTTGCGGGG
CGCTGGAATCTCCTGGGCATCGACCTGAAGAACGAGCCCCACGGCATTGC
CAGCTGGGGCCACGGGCACCCCAAGACGGACTGGAATGCGTTCGCCACCA
AAAGCATCCAGACCCTGGCAACCCGCGTGCCCGACTTTCACGGAGTCTTC
TTTGTGGAGGGCATAGAAAGACCCCGGTGGAATAGTCCCCACGCCTACTG
GTGGGGTGGGAACTTGGAAGGCGTGCGGAAGTACCCAATCTCCACGGGCA
GCGAGGATCTGGACAGACGTGTGGTCTACTCGCCGCATATCTACGGGCCC
GAAGTGTTCCCTAGGCATCGCTACTTTCAGGACTCCCGCTTTCCCGACAA
CATGCCTGGCATATGGGACCATCAGTTCGGTTGGATTGAGAAATCGACGG
GCCGAGCCGTCGTCCTCGGGGAATGGGGAGGCAGTATTGTAGGCGACAGG
AAGGCGGCCGCGAACCAGCAGAAGCTCGCGGAGTGGCTGGTGCATGCCTG
CATCCCCGACAACTTTTGGTGGTGCTTGAATCCTGCCACTGAGTTCAACG
GGGGTCTGCTGGCCAGGGATTACCAGGCGGTCGACAAAAATGTGCTGCAA
ATGCTTCACTACGTGCAGCCCAAGCCCACTACCTTCCACGGCGGCATCGG
TGCGGGTGATCCCCTCTGCGTTGTGGATGGCGCCTTCGCGAATGTCAGGT
GTGCTGTGAAGATGGGCCTGCCTATTTCTACAAGTATGGCTGCCCTGATG
GCCGAGAAAGAGCGGCAACCCTAA back to top
|