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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100043g6.7233.mrna |
| Orig protein id | gnl|cribi|Naga_100043g6.7233 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:152757..155314 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7521 ID=rna7521|Name=rna7521|organism=Nannochloropsis gaditana|type=mRNA|length=1239bp
ATGGGAAAACCCACGTCGCCCCCAACAGCGCCTGTCCCTCCGGATAAAAG
TTTGCCCATATCACCATGCAAAGGACTTGTGATTCCTTCCGTGCCTTCTG
CGCTCTTGCACTTGTCTTCTCCTACGTCACGGGACGCTAAGACGAGCAAC
AGTTACGAGGGGACCCAAGGAGTGAAAGGATTGGAACACCGTCAACATCC
AAAGCCGTCGGACGAATTTCCATCACTTTCTTCAGCAAACAGTGGAACCC
CTTTAAGCCATGCCAATTCCTCCTTTGATGATGACGTGCAACCACTTCCT
CACTTATCGGACGCGGAGGCCGACGCTCTTGTTGGGCGTATGCGCTCCGA
TTTGCGGGGAGACGAACGTTGTCTAGAAACAGATGCGTGCCATATCACCT
CTGCGCCACTTCCTGATGGGTTTCTTTTGCAATGCCTTCGGTCCCGTTCA
GGAGTGTACGACGAAGCTTTGATGGTGGCCCGGAACTTCCTCGCGTTCCG
ACGGGGGGCTGGATGGCCGCTTCGCCTCACAGCTCGCGACGTCAGTGGTG
GACCCTTGGAGTCAGGGGCGCATTGGATTTTGCCGGGTAAGGACAAGGAG
GGCCGCGGGCTTTTTGTCTTCAACGTTGGTCGCATTGACACTCGCTTGGG
AAGTCTGGAGCGGTACCAGCAGATGGGAGCGTACCTGGTGGAGCGCCTGA
CCCGAGAGGAGGAGGTGCAGCGGACGGGCCTGGTGATGGTAGTGAACATG
GCGCACGTGCCCTTGGGCCTATACCGGTCCTTAATCTCTCTTACTGACGC
CAAACGGGGGGTGCGCATGTGGCAAGACGCCTTCCCCAGTAAGCTCAAAC
GGATTTACGTGGTGGGGGGGTCAAGGTGGCTGCTGCAGGCGGTGCGCCTG
GTCGTGGCCATGCTCGGCAAGAAACTTCGAAAGCGCGTCCGTGTCCTGCC
TCACCAAGAGGCTTTGCAGGAAGATATCGACGCCGAGCAGCTCCCTCCAT
GCCTCGGCGGCCGCTTGGAGGGCTTCGACTGGGCGCAATGGTTGGTGGGG
TTGCCCAGCAAGTGGCGAATTGTACAGAAAGAAGGGCCTAGACGCTGGCA
AGTGAATGCATGCTCATGCGCATCTAAAATCCACGAGTGGGTCCCAGCAG
GCATAAATAGCTCGTTTGTGGAAATGTCGATACCAATGTCAGCCTGTTTG
AAAGTCCATGTTACCTCGAAGAAAGCTGAGCGCCAATGA back to topprotein sequence of rna7521 >rna7521-protein ID=rna7521-protein|Name=rna7521|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MHMAPMYCPPMNEPYFIEATSSISPLLQAPNFHSLLSRAMSPSSCASSRD
SGALYSEVTVPFQIRLHNNEVEIISVSLDDDVQEAAERFAARYDLPPALQ
DRLAQMLRIRQLDLARELIKGMDQDMRVALLEHVALVKDSAACVEGGVKT
ENLAEDLQALDAELSRRLKHIVFLESKMSIATTESQRNLAHLTHLLEESK
TSNRNLGARLEAKEMEIRELEALVASQDLTLKGLAQALTRARDLNGEVKR
LEALVGRQKKEGNKAEDGEQLGWKAQGLDEARQQTRRIRCEIKSTRCRQR
GCGYPERSTASECPSKHLSVITIPPPAGALNVPAAPGQKVNDLLPRDYPR
AVQTKDWSAYNIERAGPCHTSPDIRRIVLGSRSTTMQTKDDSDDIYPDTA
CH back to topmRNA from alignment at CM002472.1:152757..155314+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7521 ID=rna7521|Name=rna7521|organism=Nannochloropsis gaditana|type=mRNA|length=2558bp|location=Sequence derived from alignment at CM002472.1:152757..155314+ (Nannochloropsis gaditana)
CCATCGGCCTTGTCACCTGATGTGGGCCCGAAATCACCTGTGGAGCAAGT
AGGATAAGTAAGTCCACGAAGATGATGATTGTGACATCCATGCCACCTGC
ATCCCACTCCATTGCTGAAGCACAGGCTCCTACCCTGCCTTTTGATCCTT
TTGATCGCGTCAGGGCTAATAAATAGGCCCTCGGGCTTCGCCGCAGCACC
TCCTcagggaacggagggagggggccggaagACGCTCGCTGATTGAAGCT
GCGACAAGCGGCCCGAAAAGCCCGTCCCGGCTTGTCTGCTCCCAGGCACA
CATGTCTTGCCCTAAGAAGGAgtaggagatggagaagttTTTCTTACACC
ATAGGAGAAATTGTTTCTCCGTGAAGTCTGTCGTGCAGGCTTGGGTGCAC
CGCCTACACATGCGTATTTTACTGTCAAACGCACGAACACAATTTCCCGC
TTGCTACTCGTGCTAGGTAGCGGTATCGCGCACAGAACGCCAGCCTTCGT
GATCATGAAAGATACAAGACCACAAAATGTAGATGTGCCTACACTACGCA
CCCTTACGCTTGACTGCTCTGttcaaaaagaggaaatTGGCCTGGTGCGT
CGTCTATCTTTCGGTGTGCTACGCCTGGTCATAGCCTCCTTCTGCGTACT
AACACTTTTGCAATTCTTCAGTTACAAATGCATATGGCACCAATGTATTG
TCCTCCTATGAATGAGCCTTATTTTATAGAAGCAACGTCGTCAATCTCCC
CTCTTTTACAGGCACCTAACTTCCATAGCCTCTTATCGCGAGCTatgtcg
ccgtcctcctgcgCGTCATCCCGCGACAGTGGCGCGCTTTACTCGGAAGT
CACAGTGCCATTTCAAATCCGATTGCACAATAACGAAGTAGAAATTATCT
CTGTTAGCCTCGATGATGATGTTCAAGAAGCTGCTGAGCGTTTTGCAGCC
AGATACGACCTGCCGCCGGCCTTACAGGATAGGCTGGCTCAGATGCTCCG
AATCCGGCAACTTGATTTGGCACGGGAGCTGATCAAGGGTATGGATCAGG
ACATGCGCGTGGCCCTACTGGAGCATGTGGCATTGGTGAAGGATAGTGCA
GCGTGCGTTGAAGGGGGAGTGAAGACGGAAAACCTTGCTGAAGACCTCCA
GGCTTTAGATGCAGAGCTGTCCCGGCGACTCAAACACATAGTTTTTTTGG
AGAGTAAAATGTCCATTGCTACGACAGAATCCCAAAGAAACCTTGCCCAC
TTGACGCACTTGCTAGAGGAGTCAAAGACATCGAACAGAAACCTTGGTGC
ACGGCTCGAAGCAAAGGAGATGGAAATCCGGGAACTGGAGGCACTTGTGG
CTTCTCAGGACCTTACTTTGAAGGGTTTGGCACAAGCATTGACGCGGGCT
AGGGACCTCAACGGAGAGGTCAAACGTTTGGAGGCTTTGGTGGGAAGaca
gaagaaagaagggaacaaggcggaggatggagaacAGCTTGGCTGGAAAG
CTCAAGGCTTAGATGAGGCGAGGCAGCAAACAAGGAGAATTCGCTGCGAA
ATAAAGAGCACACGGTGCAGACAAAGAGGATGCGGTTATCCCGAACGGTC
TACCGCAAGTGAATGCCCCTCTAAACATTTGTCAGTCATCACCATTCCCC
CACCCGCCGGCGCTCTGAACGTCCCAGCCGCACCCGGGCAAAAGGTCAAT
GATCTTCTACCAAGAGATTATCCGCGCGCTGTCCAAACGAAGGATTGGAG
CGCGTACAACATTGAAAGAGCCGGGCCTTGCCATACAAGTCCCGATATCC
GACGAATCGTCCTCGGGAGTCGGAGCACAACGATGCAAACGAAGGACGAC
AGCGATGATATCTACCCAGACACTGCCTGCCACTGACTGTTTGAATATCG
CCAGGTACTAATCGCTCCAGAATTTCcgatgggagaggaagaactTAATG
GGGATATATTTCTCATTGAGGTATCGATCCGGGCTGCAAGAAAATGCGTC
CTAAATATGTTTCTAATCACGAGGAACTCACAGCATCTTGAAAGATATCT
GGTGATCATCGGCGATATTTTTAGGTGATAgcaggggggagagacgCAGC
AAAACAGCATCAACCGATACGATAACCGTCAGAGAGTTTTAGATGGGATT
GTTAAGGGCGAGATGAACATTGGGTCTTCAGCACGAAGAGTGCCGCTTTT
GGGCCGCGAAAATGTAATATACCATTAATTGAGAGGGCTTCTCTGCTGCC
GTCCGATAGTAGCAGACAAGTTAAGTCTATTTCAATAAGCGTCCATCGTA
ATAAACCTACTCGTTTTCGGTCAATTTAATCATCTGACTCTTGCCCTGAC
TGGCACAGCGCATCAAATCTTTTCTTATAGCCGCGAGAAAGAGAACGGGC
GATAGtggcaaaagaaaaagccAGTTTCCTCATTTTTATATAAAATCACA
TCGCAATGAGGTTGATCCTTGATGACATGGTTTTGCGTTTCTACCGCGGC
AGCGTTGTGCACCGTTGTTGACAAGAGTGAAACAACCATGTGCACTTACT
TCCAAGGG back to topCoding sequence (CDS) from alignment at CM002472.1:152757..155314+ >rna7521 ID=rna7521|Name=rna7521|organism=Nannochloropsis gaditana|type=CDS|length=1209bp|location=Sequence derived from alignment at CM002472.1:152757..155314+ (Nannochloropsis gaditana)
ATGCATATGGCACCAATGTATTGTCCTCCTATGAATGAGCCTTATTTTAT
AGAAGCAACGTCGTCAATCTCCCCTCTTTTACAGGCACCTAACTTCCATA
GCCTCTTATCGCGAGCTatgtcgccgtcctcctgcgCGTCATCCCGCGAC
AGTGGCGCGCTTTACTCGGAAGTCACAGTGCCATTTCAAATCCGATTGCA
CAATAACGAAGTAGAAATTATCTCTGTTAGCCTCGATGATGATGTTCAAG
AAGCTGCTGAGCGTTTTGCAGCCAGATACGACCTGCCGCCGGCCTTACAG
GATAGGCTGGCTCAGATGCTCCGAATCCGGCAACTTGATTTGGCACGGGA
GCTGATCAAGGGTATGGATCAGGACATGCGCGTGGCCCTACTGGAGCATG
TGGCATTGGTGAAGGATAGTGCAGCGTGCGTTGAAGGGGGAGTGAAGACG
GAAAACCTTGCTGAAGACCTCCAGGCTTTAGATGCAGAGCTGTCCCGGCG
ACTCAAACACATAGTTTTTTTGGAGAGTAAAATGTCCATTGCTACGACAG
AATCCCAAAGAAACCTTGCCCACTTGACGCACTTGCTAGAGGAGTCAAAG
ACATCGAACAGAAACCTTGGTGCACGGCTCGAAGCAAAGGAGATGGAAAT
CCGGGAACTGGAGGCACTTGTGGCTTCTCAGGACCTTACTTTGAAGGGTT
TGGCACAAGCATTGACGCGGGCTAGGGACCTCAACGGAGAGGTCAAACGT
TTGGAGGCTTTGGTGGGAAGacagaagaaagaagggaacaaggcggagga
tggagaacAGCTTGGCTGGAAAGCTCAAGGCTTAGATGAGGCGAGGCAGC
AAACAAGGAGAATTCGCTGCGAAATAAAGAGCACACGGTGCAGACAAAGA
GGATGCGGTTATCCCGAACGGTCTACCGCAAGTGAATGCCCCTCTAAACA
TTTGTCAGTCATCACCATTCCCCCACCCGCCGGCGCTCTGAACGTCCCAG
CCGCACCCGGGCAAAAGGTCAATGATCTTCTACCAAGAGATTATCCGCGC
GCTGTCCAAACGAAGGATTGGAGCGCGTACAACATTGAAAGAGCCGGGCC
TTGCCATACAAGTCCCGATATCCGACGAATCGTCCTCGGGAGTCGGAGCA
CAACGATGCAAACGAAGGACGACAGCGATGATATCTACCCAGACACTGCC
TGCCACTGA back to top
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