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Properties
| Property Name | Value |
|---|
| Product | 3-oxo-5-alpha-steroid 4 |
| Orig transcript id | gnl|cribi|Naga_100485g3.10094.mrna |
| Orig protein id | gnl|cribi|Naga_100485g3.10094 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:98286..100580 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7498 ID=rna7498|Name=rna7498|organism=Nannochloropsis gaditana|type=mRNA|length=1172bp
TTTTGGCCTTGTCCATTGACCAAATTGTCTTTACTTCTTTCTCATCGTTT
CTGACCATTTTCCTTTTTTATAGCACGCGAAAGCATCAAGGGTAAATGAG
TGCAGGGCCCCGCACTGAGATTTTTGTTCTTGGTGTAGTTCGGGTCATTG
ACCGCAAACTTCTCTCCTCCTACTCGTCCTCCTCATTCCACCCTTCGCTC
CTGGTCAGTCTCGCTGCTGCTTATCCAGCTTTCGAAGCAAATTTGCGCCA
AAGCAAAGAGTGCTCTGATTCAAATTTCCATTCCCTCGTCGATGACGGAG
GTCTACTTTATGCTTGCCTGTCAGCCAAAAACTATCCATCTCGCCTTATC
TTCACTTTGCTTGAAGAGATCCAAGAAAACTTCGTAGCGCATCATACCCG
GGAGCAGATAGACAAAGCTGAAGAAGGTGGGAGCAAGGAAAATGGACAAT
TCTCGAAGCAAGACAAGAGCTGGCTGCAGGGCCTAGCCAAAAAGTATCGG
GAGGCCGCCTGCGTGGACAAGCTGCAGTCGATTCAAAAGAAGGTGGACGC
TACATGTGGGACCATGCAAGACTCGATCGCAACACTCCTCGAAAGTGACG
ACACACTAGAGTCCTTGACAAATGCTACCGAGTCTCTCTCTCACCAAGCC
AAGGCTTTCCATCGCCGGACCTCCGCCTTACGGTCCAGGGTCCAATGGGA
GGCAATCCGGTGCGGAGCAGGGAGGGAGGGAAGCAGGGAAGGAGGAAGGG
ACACAGGAAAAAAGAAAAAGAGACTCTCCGACGGTCCTCAAGGAGTCCAT
TTATCTCACATTCTACGACCTACCTACCTACCTACCTACCTCCCCCCCCC
CCCCCCCCCTTCGCAGCTGGCGGATCGCCGTCCTCCTCGTCTTTGCCCTC
TCCCTCTCCATTGTCCTCTTCCCCATCATTCTTGCCGCCCGGAATCCTCG
CGATCCAATCCTCCCACTTGACTCTGCCCCATCATCCGCGGCGCTGGCGC
CAAGAATGGGGGAGGGAGGGGAGCAGCCACTGCCTGCAGAGTAAGCGGGA
TGGAGGGATGGAGGGAGGGAGGGATGGAGGGATGGAGGGAGGGAGGGAGG
GGGCCATTGTGCGTCTACAACCGCATCAGGGTGGAAGCGCGTGCATGGTG
GGTGTGCCAGGGGAGGGGCAGA back to topprotein sequence of rna7498 >rna7498-protein ID=rna7498-protein|Name=rna7498|organism=Nannochloropsis gaditana|type=polypeptide|length=326bp
MPLRVTVALGKGKHVDLDLANKNATLQDLKEAFSKKIRRLSPHRQSFRIQ
VDSSSSSSTTVKLSQSSEPLVSSGYKEGMILLFKDLGPQIDYKTVFLLEY
LGPILIMLLYASRPSFIYGRPPSVPPSPTPSFPPYPMETRVILACWVGHF
VKRELETLFVHVFSKPTMALRQLFVNCAYYYAFALGIGYFICSPTYQPPS
LALPPSLPPSLPFCGLLLFLLAEVSNLYCHLLLSSLRPSTTIGAPPSRPI
PHGFLFRYLACPNYLCEVLAWVGFSLLTFLPLSFLFTLVGASQMLQWAQL
KHKAYLKEHGDAYKKLKRRAMIPGIL back to topmRNA from alignment at CM002472.1:98286..100580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7498 ID=rna7498|Name=rna7498|organism=Nannochloropsis gaditana|type=mRNA|length=2295bp|location=Sequence derived from alignment at CM002472.1:98286..100580- (Nannochloropsis gaditana)
AAATGCAATCGCTATTGCCATAAAGTAACACACAGAAAGGCCATGTGCTT
GGAATTGTGTATAACGTTGCTCAGATAGCGGCGGTACTTGCTGTAGCTCG
CTGCTTGTTAGTAAGTTGATCTCAGAGGGAAGCGAAGAAGGGTGAAGAGA
TGTGAGTACATACACACGCGTTCACAAAGGAAAAGGCCTTGGGCATCAGT
AAAATATACAATGTCACATGATCAATGATTTCGTAGAGGTTGAGACGCGT
GGCTTGATGGCTTGTGGTAGAAATTGGAATGCCGCGGGGCTTCTAGCATG
CACATTACCGTCGTGATAGCAGTCATTCTCCGGCTCAAGGTGCAATGGTC
ACGCAACCTTTCTGAGGCGACATACTTCTCAATTCCATCGCTTTGTATCC
TGTAGCAGACGACCGTATCGTCCGGTCCTTATTCTGGGCATACTTGGTGC
TTTTGCGCGTCGTTTATCATGCCGTTGCGGGTGACGGTGGCGTTGGGCAA
AGGGAAACATGTCGACTTGGACCTTGCCAACAAAAATGCGACGCTTCAGG
ATTTGAAAGAAGCGTTTTCAAAGAAGGTGAGCCTATCAAGAGTATGGATT
CTGCACGGGATGGCATTACAAGTAACGTGCCTTCGGTCTGACTTCCCCTT
TCCCTTCCTTCCTCCCTTGCTCCCTCCTTCCCTCCCTCCCTTCCTCCCTC
CTCACAGATCCGTCGCCTTTCTCCTCACCGGCAATCCTTCCGCATCCAAG
TAGATTCCTCTTCTTCCTCCTCCACCACCGTTAAGCTGTCACAGTCCTCA
GAGCCGCTGGTGTCGTCCGGCTACAAGGAGGGCATGATTCTTCTGTTCAA
AGACCTGGGACCTCAGGTGCTCCCTCCCTCCCTCCCTCCCTCCCTAACTC
TCCTAATCTGTATTCCTCTGTGATCATCTTCTCCCACTTCTTCATCCCAA
GCTTCTTGACTCCGATGCGGGTTCTACTCCTTCCTGTTCTGTTCCTCCCT
CCTGCCCCGCTCCCTCCCCACGCCTCCCTCCCTTCCTCCCTCCCTCCCTC
CCTCCCTTCTTTCGACCAGATCGACTACAAAACAGTTTTCCTTCTCGAGT
ACCTCGGCCCTATCCTCATCATGCTGCTCTACGCCAGCCGTCCTTCCTTC
ATATACGGTCGCCCACCCTCGGTCCCTCCCTCCCCCACGCCCTCCTTCCC
TCCCTACCCCATGGAGACCCGCGTCATCCTCGCCTGCTGGGTCGGACACT
TCGTCAAGGTAACGCACCTTGGCCCTTCCCTCCCTCACTCACTCCCTCCC
TTCCTCCTTACCTCCCTAACACTTCCCGCCCCAAACCCCCTTGACCTCCC
TCCCACCCTCCCTCCCCCCCTCCCTCCCTCAGCGCGAACTCGAGACCCTT
TTCGTCCACGTCTTTTCCAAGCCTACCATGGCCCTCCGGCAGCTCTTTGT
CAATTGCGCCTACTACTATGCTTTCGCTCTGGGCATCGGCTACTTTATCT
GCAGCCCGACGTACCAGCCCCCCTCCCTCGCCCTCCCGCCCTCCCTCCCG
CCCTCCCTTCCCTTCTGCGGCCTCCTCCTCTTCCTCCTCGCCGAAGTCAG
CAACCTCTACTGCCACCTCCTCCTCTCCTCCCTCCGTCCCTCCACCACCA
TCGGCGCCCCTCCCTCCCGGCCCATCCCCCACGGCTTCCTCTTCCGCTAC
CTCGCCTGCCCCAACTACCTCTGCGAAGTCCTAGCCTGGGTGGGCTTCTC
CCTCCTCACTTTCCTCCCCCTCTCTTTCCTCTTCACCCTAGTGGGGGCGT
CGCAAATGCTGCAATGGGCGCAGCTCAAACACAAAGCGTACCTTAAGGAA
CACGGGGATGCCTACAAGAAGCTGAAAAGGAGGGCCATGATACCCGGAAT
CCTCTGAGACGGCCAAGGCCCTCGCCTTGTGGGGGGTGTTTGAATTTAAA
TTTGAAATGGATTTGAAATTACGGAAAGAAAGGGGGTGGCCCTGGAACAA
GAACCGCGACCCCAGCGCCGAGCCTTGTATCGCTGATTTCGTGTTTTTCC
TTCTTTCTCCCCTCCTAAAGCAGCACATGACCTTTATTTACAAACCTGTT
GTATCATTGCTTCCGCGTGATGGCTTTTTCTGCCCTTCCAAAGGGAGTTT
AATCATCCCAATCTTTCCTTTCCATGGTGACATCCACCGTCCCTCTTTCT
CCTCTCTTTCTCTCTCTCCCTCTCCCCCTTTCTCTCCATCTCCCTATCTC
CCTCTCCTTTCCCACCTCTCTCTCCGATTCCTCCTCTCTCTCTCC back to topCoding sequence (CDS) from alignment at CM002472.1:98286..100580- >rna7498 ID=rna7498|Name=rna7498|organism=Nannochloropsis gaditana|type=CDS|length=3924bp|location=Sequence derived from alignment at CM002472.1:98286..100580- (Nannochloropsis gaditana)
CGCGAACTCGAGACCCTTTTCGTCCACGTCTTTTCCAAGCCTACCATGGC
CCTCCGGCAGCTCTTTGTCAATTGCGCCTACTACTATGCTTTCGCTCTGG
GCATCGGCTACTTTATCTGCAGCCCGACGTACCAGCCCCCCTCCCTCGCC
CTCCCGCCCTCCCTCCCGCCCTCCCTTCCCTTCTGCGGCCTCCTCCTCTT
CCTCCTCGCCGAAGTCAGCAACCTCTACTGCCACCTCCTCCTCTCCTCCC
TCCGTCCCTCCACCACCATCGGCGCCCCTCCCTCCCGGCCCATCCCCCAC
GGCTTCCTCTTCCGCTACCTCGCCTGCCCCAACTACCTCTGCGAAGTCCT
AGCCTGGGTGGGCTTCTCCCTCCTCACTTTCCTCCCCCTCTCTTTCCTCT
TCACCCTAGTGGGGGCGTCGCAAATGCTGCAATGGGCGCAGCTCAAACAC
AAAGCGTACCTTAAGGAACACGGGGATGCCTACAAGAAGCTGAAAAGGAG
GGCCATGATACCCGGAATCCTCTGAATCGACTACAAAACAGTTTTCCTTC
TCGAGTACCTCGGCCCTATCCTCATCATGCTGCTCTACGCCAGCCGTCCT
TCCTTCATATACGGTCGCCCACCCTCGGTCCCTCCCTCCCCCACGCCCTC
CTTCCCTCCCTACCCCATGGAGACCCGCGTCATCCTCGCCTGCTGGGTCG
GACACTTCGTCAAGATCCGTCGCCTTTCTCCTCACCGGCAATCCTTCCGC
ATCCAAGTAGATTCCTCTTCTTCCTCCTCCACCACCGTTAAGCTGTCACA
GTCCTCAGAGCCGCTGGTGTCGTCCGGCTACAAGGAGGGCATGATTCTTC
TGTTCAAAGACCTGGGACCTCAGATGCCGTTGCGGGTGACGGTGGCGTTG
GGCAAAGGGAAACATGTCGACTTGGACCTTGCCAACAAAAATGCGACGCT
TCAGGATTTGAAAGAAGCGTTTTCAAAGAAGCGCGAACTCGAGACCCTTT
TCGTCCACGTCTTTTCCAAGCCTACCATGGCCCTCCGGCAGCTCTTTGTC
AATTGCGCCTACTACTATGCTTTCGCTCTGGGCATCGGCTACTTTATCTG
CAGCCCGACGTACCAGCCCCCCTCCCTCGCCCTCCCGCCCTCCCTCCCGC
CCTCCCTTCCCTTCTGCGGCCTCCTCCTCTTCCTCCTCGCCGAAGTCAGC
AACCTCTACTGCCACCTCCTCCTCTCCTCCCTCCGTCCCTCCACCACCAT
CGGCGCCCCTCCCTCCCGGCCCATCCCCCACGGCTTCCTCTTCCGCTACC
TCGCCTGCCCCAACTACCTCTGCGAAGTCCTAGCCTGGGTGGGCTTCTCC
CTCCTCACTTTCCTCCCCCTCTCTTTCCTCTTCACCCTAGTGGGGGCGTC
GCAAATGCTGCAATGGGCGCAGCTCAAACACAAAGCGTACCTTAAGGAAC
ACGGGGATGCCTACAAGAAGCTGAAAAGGAGGGCCATGATACCCGGAATC
CTCTGAATCGACTACAAAACAGTTTTCCTTCTCGAGTACCTCGGCCCTAT
CCTCATCATGCTGCTCTACGCCAGCCGTCCTTCCTTCATATACGGTCGCC
CACCCTCGGTCCCTCCCTCCCCCACGCCCTCCTTCCCTCCCTACCCCATG
GAGACCCGCGTCATCCTCGCCTGCTGGGTCGGACACTTCGTCAAGATCCG
TCGCCTTTCTCCTCACCGGCAATCCTTCCGCATCCAAGTAGATTCCTCTT
CTTCCTCCTCCACCACCGTTAAGCTGTCACAGTCCTCAGAGCCGCTGGTG
TCGTCCGGCTACAAGGAGGGCATGATTCTTCTGTTCAAAGACCTGGGACC
TCAGATGCCGTTGCGGGTGACGGTGGCGTTGGGCAAAGGGAAACATGTCG
ACTTGGACCTTGCCAACAAAAATGCGACGCTTCAGGATTTGAAAGAAGCG
TTTTCAAAGAAGCGCGAACTCGAGACCCTTTTCGTCCACGTCTTTTCCAA
GCCTACCATGGCCCTCCGGCAGCTCTTTGTCAATTGCGCCTACTACTATG
CTTTCGCTCTGGGCATCGGCTACTTTATCTGCAGCCCGACGTACCAGCCC
CCCTCCCTCGCCCTCCCGCCCTCCCTCCCGCCCTCCCTTCCCTTCTGCGG
CCTCCTCCTCTTCCTCCTCGCCGAAGTCAGCAACCTCTACTGCCACCTCC
TCCTCTCCTCCCTCCGTCCCTCCACCACCATCGGCGCCCCTCCCTCCCGG
CCCATCCCCCACGGCTTCCTCTTCCGCTACCTCGCCTGCCCCAACTACCT
CTGCGAAGTCCTAGCCTGGGTGGGCTTCTCCCTCCTCACTTTCCTCCCCC
TCTCTTTCCTCTTCACCCTAGTGGGGGCGTCGCAAATGCTGCAATGGGCG
CAGCTCAAACACAAAGCGTACCTTAAGGAACACGGGGATGCCTACAAGAA
GCTGAAAAGGAGGGCCATGATACCCGGAATCCTCTGAATCGACTACAAAA
CAGTTTTCCTTCTCGAGTACCTCGGCCCTATCCTCATCATGCTGCTCTAC
GCCAGCCGTCCTTCCTTCATATACGGTCGCCCACCCTCGGTCCCTCCCTC
CCCCACGCCCTCCTTCCCTCCCTACCCCATGGAGACCCGCGTCATCCTCG
CCTGCTGGGTCGGACACTTCGTCAAGATCCGTCGCCTTTCTCCTCACCGG
CAATCCTTCCGCATCCAAGTAGATTCCTCTTCTTCCTCCTCCACCACCGT
TAAGCTGTCACAGTCCTCAGAGCCGCTGGTGTCGTCCGGCTACAAGGAGG
GCATGATTCTTCTGTTCAAAGACCTGGGACCTCAGATGCCGTTGCGGGTG
ACGGTGGCGTTGGGCAAAGGGAAACATGTCGACTTGGACCTTGCCAACAA
AAATGCGACGCTTCAGGATTTGAAAGAAGCGTTTTCAAAGAAGCGCGAAC
TCGAGACCCTTTTCGTCCACGTCTTTTCCAAGCCTACCATGGCCCTCCGG
CAGCTCTTTGTCAATTGCGCCTACTACTATGCTTTCGCTCTGGGCATCGG
CTACTTTATCTGCAGCCCGACGTACCAGCCCCCCTCCCTCGCCCTCCCGC
CCTCCCTCCCGCCCTCCCTTCCCTTCTGCGGCCTCCTCCTCTTCCTCCTC
GCCGAAGTCAGCAACCTCTACTGCCACCTCCTCCTCTCCTCCCTCCGTCC
CTCCACCACCATCGGCGCCCCTCCCTCCCGGCCCATCCCCCACGGCTTCC
TCTTCCGCTACCTCGCCTGCCCCAACTACCTCTGCGAAGTCCTAGCCTGG
GTGGGCTTCTCCCTCCTCACTTTCCTCCCCCTCTCTTTCCTCTTCACCCT
AGTGGGGGCGTCGCAAATGCTGCAATGGGCGCAGCTCAAACACAAAGCGT
ACCTTAAGGAACACGGGGATGCCTACAAGAAGCTGAAAAGGAGGGCCATG
ATACCCGGAATCCTCTGAATCGACTACAAAACAGTTTTCCTTCTCGAGTA
CCTCGGCCCTATCCTCATCATGCTGCTCTACGCCAGCCGTCCTTCCTTCA
TATACGGTCGCCCACCCTCGGTCCCTCCCTCCCCCACGCCCTCCTTCCCT
CCCTACCCCATGGAGACCCGCGTCATCCTCGCCTGCTGGGTCGGACACTT
CGTCAAGATCCGTCGCCTTTCTCCTCACCGGCAATCCTTCCGCATCCAAG
TAGATTCCTCTTCTTCCTCCTCCACCACCGTTAAGCTGTCACAGTCCTCA
GAGCCGCTGGTGTCGTCCGGCTACAAGGAGGGCATGATTCTTCTGTTCAA
AGACCTGGGACCTCAGATGCCGTTGCGGGTGACGGTGGCGTTGGGCAAAG
GGAAACATGTCGACTTGGACCTTGCCAACAAAAATGCGACGCTTCAGGAT
TTGAAAGAAGCGTTTTCAAAGAAG back to top
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