rna7486, rna7486 (mRNA) Nannochloropsis gaditana

Overview
Namerna7486
Unique Namerna7486
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length439
Alignment locationCM002472.1:75544..76058 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101075g2.10526.mrna
Orig protein idgnl|cribi|Naga_101075g2.10526
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:75544..76058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101075g2gene7247Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7486rna7486-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23206.1cds7468Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7486 ID=rna7486|Name=rna7486|organism=Nannochloropsis gaditana|type=mRNA|length=439bp
AGGCATGTGCACTTCGAAGCGGCGAAAGCTTAGGGGAATCACGGGTAACA
TCAGAAGAAGGAACTGAAAGACATGGATTTTCCTGGGGCGTTGCGGACTC
GAGCCTCGACGGGAGGAATCACCAAGGAGACGAGACGGTCGGTCGGGCCC
CCCCCGGAGGAAATGAAGAGGAAACGGGCACCGCGGCTTCTATGCACCTG
CGTGCGGTGTCGGACGGGGAAAATAAAATGTGATGGCAACTATCCTTGTG
CACGCTGTTGGCGCCTCTCCCTCCCTTGCCGTGTCCAACGGCTAGACAGT
TGGGCGTCCACGCCGTTGATGCAATTGGTTGTGGACCGAGGGGATCCGCT
GGCCTTGAAGTCTTTGTACATGCGGGCTTTCTGCCAGCTGGAGGAGGAAG
GAAAAATATTGCGGAAGAAAGCCTTGGATATGCTGTAAG
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protein sequence of rna7486

>rna7486-protein ID=rna7486-protein|Name=rna7486|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MLVAIRPCLLKRHRAHCGNRYDAGMASAAFSPETREFSLLWSSIAAGTRM
DIISLCCTRALVYDAIFCGHEMRLVRRDCSCLLCQSDLGSSATIEYFGPF
PLSETVVLPPVNVFMMCRRHALPLASWKATHILVLIDLMPTKEN
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mRNA from alignment at CM002472.1:75544..76058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7486 ID=rna7486|Name=rna7486|organism=Nannochloropsis gaditana|type=mRNA|length=515bp|location=Sequence derived from alignment at CM002472.1:75544..76058- (Nannochloropsis gaditana)
ATGCTCGTTGCAATCCGACCGTGTCTTTTGAAACGCCATCGTGCACACTG
CGGCAACCGGTACGACGCAGGTATGGCCTCGGCGGCTTTCTCCCCGGAAA
CGCGAGAATTTTCTTTGCTCTGGTCATCGATCGCCGCAGGCACTCGTCTA
TCACTAGCCTGCCGGGCTCGCACTTTTTTTTTAAATGTGCAGCAATCTCA
CTGGCTCCCGCCAGTCGTATCCTAGGAATGGACATAATCTCACTATGCTG
CACGAGGGCTTTAGTCTACGATGCCATCTTTTGTGGTCATGAAATGCGCC
TCGTCCGGAGAGACTGTTCTTGTTTACTATGCCAAAGTGACCTGGGGTCC
AGCGCGACGATAGAGTACTTCGGGCCCTTTCCACTGTCTGAAACGGTGGT
ATTGCCCCCCGTAAATGTCTTCATGATGTGTCGAAGGCATGCCCTGCCTT
TGGCTTCATGGAAGGCGACACACATTTTAGTCCTTATCGATTTAATGCCG
ACTAAGGAGAATTAA
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Coding sequence (CDS) from alignment at CM002472.1:75544..76058-

>rna7486 ID=rna7486|Name=rna7486|organism=Nannochloropsis gaditana|type=CDS|length=870bp|location=Sequence derived from alignment at CM002472.1:75544..76058- (Nannochloropsis gaditana)
GAATGGACATAATCTCACTATGCTGCACGAGGGCTTTAGTCTACGATGCC
ATCTTTTGTGGTCATGAAATGCGCCTCGTCCGGAGAGACTGTTCTTGTTT
ACTATGCCAAAGTGACCTGGGGTCCAGCGCGACGATAGAGTACTTCGGGC
CCTTTCCACTGTCTGAAACGGTGGTATTGCCCCCCGTAAATGTCTTCATG
ATGTGTCGAAGGCATGCCCTGCCTTTGGCTTCATGGAAGGCGACACACAT
TTTAGTCCTTATCGATTTAATGCCGACTAAGGAGAATTAAATGCTCGTTG
CAATCCGACCGTGTCTTTTGAAACGCCATCGTGCACACTGCGGCAACCGG
TACGACGCAGGTATGGCCTCGGCGGCTTTCTCCCCGGAAACGCGAGAATT
TTCTTTGCTCTGGTCATCGATCGCCGCAGGCACTCGAATGGACATAATCT
CACTATGCTGCACGAGGGCTTTAGTCTACGATGCCATCTTTTGTGGTCAT
GAAATGCGCCTCGTCCGGAGAGACTGTTCTTGTTTACTATGCCAAAGTGA
CCTGGGGTCCAGCGCGACGATAGAGTACTTCGGGCCCTTTCCACTGTCTG
AAACGGTGGTATTGCCCCCCGTAAATGTCTTCATGATGTGTCGAAGGCAT
GCCCTGCCTTTGGCTTCATGGAAGGCGACACACATTTTAGTCCTTATCGA
TTTAATGCCGACTAAGGAGAATTAAATGCTCGTTGCAATCCGACCGTGTC
TTTTGAAACGCCATCGTGCACACTGCGGCAACCGGTACGACGCAGGTATG
GCCTCGGCGGCTTTCTCCCCGGAAACGCGAGAATTTTCTTTGCTCTGGTC
ATCGATCGCCGCAGGCACTC
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Synonyms
Publications