rna7461, rna7461 (mRNA) Nannochloropsis gaditana

Overview
Namerna7461
Unique Namerna7461
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2082
Alignment locationCM002471.1:656329..656604 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100384g2.4057.mrna
Orig protein idgnl|cribi|Naga_100384g2.4057
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:656329..656604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100384g2gene7219Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23229.1cds7443Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7461rna7461-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7461 ID=rna7461|Name=rna7461|organism=Nannochloropsis gaditana|type=mRNA|length=2082bp
AGCCTAGTGTTCATTGACCAGTTGCTGTACGCAGCCGCAGCGAGCAGGCC
ACCCCGGGAAAGGAGCGGAACTGCGGAGGCAGCGATGGGAAAGGGAGGAG
GGTGGCAGCGGGAGGGGCGCCGAGGGTTTTTGTCGGCGGAACGCCAGGAC
GCGCTCCTCCTTCTCGGTCGGGTGGCGAGGGGCTACGGGTGCCTCCTCCT
CTCTCCTCCTTCTCGCCTCCATTGGTTTCAAGAACGAGTGCTTCTGGGAA
ATTTCGGGGGGGGCGACCAGAACATAAGACTCCATGCACTGAAGGTGGTG
GAGGAGCTGCTGCAGTGGCGGAAGCATAAAAAGACAGAGGACATCGCAGG
GCAGGGCAGGAGGGAAGGGACGGGAGGAAAAGGAAAAAGGCGCGAAGAAG
GGTCACTTGAAGGCTGGGTTTTCTTCTTGATGCGCCATGTCCGTCACGCG
TTCTACGACCCTTACCACGGAGTGCGAGCCGTAGCCTGCGCCTGCCTTTC
ACATTTCGAGGCGAAGGACTGGCGCGAAGGGTGGGGTGGGGGTTTGGGGA
GGGAGCGACTCATTTCTTCCCCTCTGGTTCCTGTAGAGCATGCCTTGTCT
CCTGCGAATGGAAGGAGAGGGAGGGAAGGGCGAGGGGGAACAGAGAAAGA
AGGTGTCGACGGGGTAAAAGCAAGCGGAGCATGTGGGGAGGGAGAGGGAG
TAGCAGGCACCGCAGGTGTCGCACTCTCGCTCGAAGGCTTCTTAGGGCAC
CTGGTGGTTGCCGCGCAGGAGGATCCGGTCTCCGGTATCAAGGCAAACGC
CTGCCGCGTCCTCGGCGTCCTTCTCCCCCACTGGAGCACCCTCTTCCTCC
CTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCGTGCCCTGTCAAGCCCTC
CTGGTCGCTACGCAAGACGTGCGTCTCGGCGTTCGCGCCCAGGCGATATG
GGCCCTCTCCAATTTCAGTCAGTCTTTGAGCAGGGAGGGGGCTGGGGATG
GCGTCCGGGTCGACGTGGGGGCCATCTGTGCGGCCGCTCTGGAGGTTCTG
AAGCAGCAACCAGGGCAGGAAAAGACGGCGAATAGTGCCCTGAGAGCCCT
GGGTCATCTTCTGGGTCGTCTGGGCTTTGAAGAGGGTGGGAACCACGAAA
AGGATCCCAGAGACGATGGACAGGGGGGTTACAGCGGCGGGAATGGTCGG
AGGAGGACGGAGGAAGAAATCCGCTTGCGCCGAGACTGTCTCGAAGTCAT
GCTCGAGTCCTTGAGGGATCCACAAAGGGAGGAAAGGAGGGAGGGAGGGG
GAGAGGGGGGCGAAAAAGACAAAGGGGAAAGGGAGGCAGGATCGCGTGTA
AAATTAAAGTGGAATGCGTGCTGTGCCCTGACGTCTTTCCTCGAAGCCAG
GGCATTGCAAAGCGCCGACCAGGTGGAGAAGGAGGAGGGTGAAAAGAGAG
CGGTAGAGGGAGGACGGGAGGGGTGGTTGGAAGACCGGAAGCGAGACCAT
GACGAGAGAGGGCCGGTTGTCGTGGCACTCCTGCATGCGCTGTTGACGGA
CAAGAATGCCAAGGTACGCGCTCATGCCGCTTTGGGCCTCCGTGCGGTCG
GAAATTTTCGGTCCTCTTACTCCTATCATTCTGAAGGGGGATTCTCCGCT
ATCCTGGATGCTGTCCTGGATGCCCGCGCCCACTTTGCCCTGTCCCCTCC
TCAGACCTCACACTCCCTCGATCGTCTTTTGCGGCACCTGGTGTGGGTAG
CTGTGGTCCGAGAGGGAGATGGCGGGCGGCGAGCAGAGGAGGAACTGAAT
GCCGACACGGCACGGCGGGTGCTAGCCTGGCTGCGGAGTTATGCAGCACA
TGGTGAAGGAGCGAAAAACCAGGAAAGGCCCGGGCAAGCGTGTCGAGAAT
TGGCGCAGGCGTGGTGGGAAGAGGGCAAGGCGAGAAGATGGGATGTAGAT
ATATTGGACGGGTTGCGCTGGTTTATCAGGGAAGAGAGTATGGGTGGGAG
ACAAACGAGGGTAGGAGCAAAAATGACAGAAGGAGGAAGGGAAGGACATC
GTATGGCAGAGGAGGACGAGGAAGAAATTTAG
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protein sequence of rna7461

>rna7461-protein ID=rna7461-protein|Name=rna7461|organism=Nannochloropsis gaditana|type=polypeptide|length=91bp
MVTERGRLCDRISFSRRRETCVEEQLEGQRADTTLGGYYKEYMYITIRSL
FRVERQEDTVCEVPRTQVSFILLVDFEYRRWADSSNFCCWG
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mRNA from alignment at CM002471.1:656329..656604-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7461 ID=rna7461|Name=rna7461|organism=Nannochloropsis gaditana|type=mRNA|length=276bp|location=Sequence derived from alignment at CM002471.1:656329..656604- (Nannochloropsis gaditana)
ATGGTCACGGAACGCGGTCGCCTATGTGATCGAATCTCCTTCTCCCGGAG
GCGCGAGACTTGTGTCGAGGAACAACTTGAAGGCCAGAGAGCCGATACCA
CTCTTGGAGGGTACTATAAAGAATATATGTATATAACTATACGTTCCCTT
TTTCGGGTCGAGCGTCAGGAGGACACTGTTTGTGAAGTCCCACGGACCCA
GGTCTCATTCATATTGTTGGTAGATTTCGAGTATCGGCGGTGGGCAGATT
CGTCGAATTTCTGTTGTTGGGGTTAA
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Coding sequence (CDS) from alignment at CM002471.1:656329..656604-

>rna7461 ID=rna7461|Name=rna7461|organism=Nannochloropsis gaditana|type=CDS|length=276bp|location=Sequence derived from alignment at CM002471.1:656329..656604- (Nannochloropsis gaditana)
ATGGTCACGGAACGCGGTCGCCTATGTGATCGAATCTCCTTCTCCCGGAG
GCGCGAGACTTGTGTCGAGGAACAACTTGAAGGCCAGAGAGCCGATACCA
CTCTTGGAGGGTACTATAAAGAATATATGTATATAACTATACGTTCCCTT
TTTCGGGTCGAGCGTCAGGAGGACACTGTTTGTGAAGTCCCACGGACCCA
GGTCTCATTCATATTGTTGGTAGATTTCGAGTATCGGCGGTGGGCAGATT
CGTCGAATTTCTGTTGTTGGGGTTAA
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Synonyms
Publications