rna7459, rna7459 (mRNA) Nannochloropsis gaditana

Overview
Namerna7459
Unique Namerna7459
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1462
Alignment locationCM002471.1:649848..650913 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101036g1.2630.mrna
Orig protein idgnl|cribi|Naga_101036g1.2630
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:649848..650913 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101036g1gene7217Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7459rna7459-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23232.1cds7441Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7459 ID=rna7459|Name=rna7459|organism=Nannochloropsis gaditana|type=mRNA|length=1462bp
GCTCAGGTGGACAAGAAGAGCCTGGCCTACCGCGAGGTGATGGAGGCGGG
CGCCACGGCTCCCTTTGGCTTCTTTGACCCCATCGGGCTCAGCACCGGGA
AGACCTTTAAGGAACTGAAGAAGTGGCGCGAGTCCGAGGTCAAGCACGGT
CGGGTTGCCATGCTGGCCGTCGTCGGCGTCCTCCTCCAGGAGGTTTTCGC
GCCTTTCTACAACCCCGAGACCGGCAGCAGCGACCCTGGCCCCGCCATTT
TCCACTTCCAGGAGCTGGAGGCCCTCAACCCTTTCCTCTTCGTTTTCCTC
ATTCTGGGCATCGCCATCGTCGAGTCCTTCACCATCAGCAAAGGCTGGGA
GTCTCCGGAGGAAATGCGCGCCGGTGAGTCAACGCCCTGCCAGGCTTTTG
CGTTTTACCCTTTCTCTTTTTCTCCTGAGGTTTCCCGGTTTTTGGGGTGT
CAGGTTCCCGTCGATTCCCTGTGTATGCGTGTCGAATTCTCGGCGATAGG
GGTCGGAGGGTGTGGGGCCCCGGCCCTAAGTCGTCGGTTCCGCAGTCGAA
GGGTAGGTGAGCGAATGAGTCCTCACAAACTTCCTATGTTGTTTTCTTCT
CTGCAGGCGGCAACACGATCGCGGGTCTCCGAGACACGTACGTGGCCGGC
GACTTGGAGTTCGACCCCCTCGGCCTGGCTCCTACGGCGGACGTGGACGC
GTTCATCAACCAGCGTTCCAAGGAGCTCAACAACGGTCGCTTGGCCATGA
TTGCTTGGGCGGGCATGGTCGTCCAAGAGCTGATCTCCAACTCAAAAATC
TTCTCCTAAGCCTTCGTTTCATGGACTGGAAAAGAGAGGAAGACGGAAAA
GAAGAAAGACCAGGCGGAGCTTGAGTGGAGTGTCTGAGAGGTGGTGATGA
TGCTGGTGCAATCGTTTTGATGAGTAGTTTGTATTTGGGCGAAGGAGAGT
TGCCATTTTTTGCCATGCCGGTCCTCGATTTCGACCGAGCAAGTGCAAAC
TTTGTTTTTCATGTGGAGGTGGTTCCAGACGCTCTCTTGGCTGTGACGGA
GGCGTGAGTCGAGAGATCCGAGCGCGAGCATTTCAGTGCCTTCCTTTTTA
AAAAAAGGGTTGAGAGCGTTCGTCTCTCAACCAGGTTTTTCTGTAATTTT
TGAGCCCAAACACGAGCTGAGAAAGCTGTGGGATTGTCATCAGACCTGAG
TTTTGCAAGCGAACGAAAAGACCGGGTTGGGGGAAAAGCGGTATGTCTTT
TTAAGTAGGGTGCAGAAATATGAATGAGAGCTGACAAACCGGAAACCAAC
AAACAAATCAAATAGGAGAATCATGAAAAGTTGATTCCAGCCTTTTCCTT
CAAGAATTCGTACAAATTTAAGCTGCGGGTGTCCACACCGCTATTGCCTG
ACGTCGAGTGAACCATAGGTTCATGAGCTGGGAGGATTGTGCCGCACGGA
CTTGATCACTGA
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protein sequence of rna7459

>rna7459-protein ID=rna7459-protein|Name=rna7459|organism=Nannochloropsis gaditana|type=polypeptide|length=236bp
MASLDGAHMYHSKAQRDGQATGWPDRNNDSGAIHGQETMQPRRKAVERRR
NGEAPALRPGLGGRGNETEEGGDDGRELREQPKKSTMRTLSSGHDRLPSQ
IQQARYEHQHHLKQQQRRNQRGANGREGPREGGRKTRGPKDAWGLEYRRS
DLKLWGEIMWATQALAKHFAEDGQDGMEGQRGNAKVAVEAEEEERGEEEG
GATTALDRVLTKLSAVRLNDTGLCPRLIPIACSSWL
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mRNA from alignment at CM002471.1:649848..650913+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7459 ID=rna7459|Name=rna7459|organism=Nannochloropsis gaditana|type=mRNA|length=1066bp|location=Sequence derived from alignment at CM002471.1:649848..650913+ (Nannochloropsis gaditana)
AACAAGTCGTGAAGTACTACCACTGGCAAGTAACCTCCTCTATTCTTAGC
GATGAAACTTATCGGGTTAATTGAGTACTGAAAATCCCGTCGCGGCAAAG
TTTAAAGATGTTGCAGGACTGCATTTTACTTGCCTTTAAGATTTTGCGTG
CCTACACGTCGCTCAGATCTTTGTATCTACTTCCTATTGCTCGCAGGGGA
CGACGCGTTGCAAACGAGCGAAGGGTCAGGACCGGGAAAAAATATAACTC
CGTACTCTGACAAATCGACGCATCGAGGCACCACGATATTATGTCATACT
TCCTGATGTTGTCGTCTTTGTTCCTAAAGGCGTGGGATCCCATGGAACTC
AGAATATGGCAAGCTTAGACGGTGCACACATGTACCACAGCAAAGCCCAG
CGGGACGGGCAGGCGACGGGATGGCCCGATAGGAACAATGATTCCGGCGC
CATTCATGGCCAAGAGACGATGCAGCCGAGAAGGAAGGCCGTCGAACGAC
GTCGCAATGGTGAAGCGCCGGCGCTGCGGCCGGGTTTGGGGGGCAGAGGC
AACGAGACAGAGGAAGGTGGCGACGATGGACGGGAACTTCGGGAGCAGCC
AAAGAAGTCAACCATGCGTACTTTATCCTCAGGACATGAtcgtctccctt
cccaaATACAGCAGGCTCGATATGAGCATCAGCATCACCTcaaacagcag
cagcgacggaATCAAAGGGGTGCGAACGGCCGGGAGGGtcccagggaggg
agggaggaagaccagaGGGCCGAAAGACGCCTGGGGTTTGGAGTATCGGC
GTTCCGATCTGAAATTATGGGGAGAAATAATGTGGGCGACGCAAGCACTG
GCCAAGCATTTTGCCGAGGATGGACAAGACGGAatggaggggcagcgagg
aAATGCcaaggtggcggtggaagcggaggaggaagaacggggagaggagg
aggggggggcgacgacgGCCCTGGATCGCGTCCTGACCAAGCTCTCCGCT
GTACGTTTAAACGACACTGGCCTTTGTCCACGCCTCATTCCCATcgcttg
ctcctcctggCTGTGA
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Coding sequence (CDS) from alignment at CM002471.1:649848..650913+

>rna7459 ID=rna7459|Name=rna7459|organism=Nannochloropsis gaditana|type=CDS|length=711bp|location=Sequence derived from alignment at CM002471.1:649848..650913+ (Nannochloropsis gaditana)
ATGGCAAGCTTAGACGGTGCACACATGTACCACAGCAAAGCCCAGCGGGA
CGGGCAGGCGACGGGATGGCCCGATAGGAACAATGATTCCGGCGCCATTC
ATGGCCAAGAGACGATGCAGCCGAGAAGGAAGGCCGTCGAACGACGTCGC
AATGGTGAAGCGCCGGCGCTGCGGCCGGGTTTGGGGGGCAGAGGCAACGA
GACAGAGGAAGGTGGCGACGATGGACGGGAACTTCGGGAGCAGCCAAAGA
AGTCAACCATGCGTACTTTATCCTCAGGACATGAtcgtctcccttcccaa
ATACAGCAGGCTCGATATGAGCATCAGCATCACCTcaaacagcagcagcg
acggaATCAAAGGGGTGCGAACGGCCGGGAGGGtcccagggagggaggga
ggaagaccagaGGGCCGAAAGACGCCTGGGGTTTGGAGTATCGGCGTTCC
GATCTGAAATTATGGGGAGAAATAATGTGGGCGACGCAAGCACTGGCCAA
GCATTTTGCCGAGGATGGACAAGACGGAatggaggggcagcgaggaAATG
Ccaaggtggcggtggaagcggaggaggaagaacggggagaggaggagggg
ggggcgacgacgGCCCTGGATCGCGTCCTGACCAAGCTCTCCGCTGTACG
TTTAAACGACACTGGCCTTTGTCCACGCCTCATTCCCATcgcttgctcct
cctggCTGTGA
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Synonyms
Publications