|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101384g1.8954.mrna |
| Orig protein id | gnl|cribi|Naga_101384g1.8954 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:594552..595121 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7441 ID=rna7441|Name=rna7441|organism=Nannochloropsis gaditana|type=mRNA|length=1033bp
AGGGAGCAAGGGGTCAAGTCTGACGCCAGTCGACGCCCTACCTGGGAGCC
GGCACCGAATGCATGTAAAATAAAAATAATAAAAAGGAGAGGGACGGGGG
GGAAGGACCTTGAGAAGCTCCTCGTGCGTGTTTGAAATGGTGGCGATGAA
ATTGTGCGTGTGGTGGTCGATCCATGTGAATGAATGGCAAATTAAAGGCG
GCCTGCAGGTTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTT
CCTTCCTTCCTTCCTTACCCCCTCCCCGGTCCTTCCCCAGCGTGGAAAAG
GGGGAGGGAGAGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAAGGAGGGAGGGGGGCGTGCAGCTGCTGCTTATAAGAGAACTTTGATT
TCTCTCGAATCGTGTGTATGCATATATGTCTTGTGGAAACGGGTCCGGGT
GCCGCCAGGGCGAAGGGAGGGCATGACACACATTTTTTATTTTTTAAAAA
GGCGTTTCTGCCCTACGATCACCCATGCATTTAAAGTAAATGGTATTTTA
AATAAAGAAGATCATGATCGTGAATGATAATTTAAATAATATAGCAGCCG
GACCCCCCCCGGCCAAATTTTCCACAACGAAAAAAAGTAGCGAGAGAAAG
GGAATACTTGCCTCGCCACGCGAACCCGAAGGCCGAAGGCGCTTCGGATG
ACGATGGAAGGCACCGTCCGTGGAACTTGACGGCGCGGCCTGAAAGTGAT
GGCGATGTCCTTCCCGGCTCATCACCCTCGAGGCGACCATGGCAGAAGGG
AGAGGGGCAGGAGGGGAAGAGGGAGGGAGGGAGGGGGGGAGGGAGAGAGA
CCTCGACCGAGCCTATCCCCTGGCGTGGGCTATTTGCGTCCAAGGAAAGG
CATTGCACGAATGAGAATGGGTCATGCATGAGCCGAAGGGGGAAGAGGGG
GGTAGGCGGGAGCTCGCGCAGCAATGCAGAGAGGATGTCTGTATGAGCCT
GGAACAAAGACGTGCACATTGACAGTGAGATGG back to topprotein sequence of rna7441 >rna7441-protein ID=rna7441-protein|Name=rna7441|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
MAPAFISSPSSPPSLPEPRGRPPGSASGIRLRPPAIPPSRLPPLPPPRPS
FSFFILLLHFLGHRIDDTFFLSVPEPCPPPFPSVGFLLSEGRRTFRALPT
LFSSASPWGFRTFLISILVLLALGRFERREGEREG back to topmRNA from alignment at CM002471.1:594552..595121+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7441 ID=rna7441|Name=rna7441|organism=Nannochloropsis gaditana|type=mRNA|length=570bp|location=Sequence derived from alignment at CM002471.1:594552..595121+ (Nannochloropsis gaditana)
CGTGCAGTGACATTGATTGAGCGCGGTACAAAACAGGTGCACGCTCAACC
ACACGTTGTGGCGCGTTTCGGGCAGCAACGACCTGCGTCCGGCCTGATTC
TTAGGGGTCACGAACATCCATCCCCATCCAGGAGCCGACATCGCCGGGCG
GCCAAGGGCAGTGACCATGGCACCGGCTTttatctcctccccttcctccc
ctccgtctctgcCAGAACCCCGTGGTCGGCCACCAGGGTCCGCGTCAGGT
ATAAggctccgtcctcctgccattcctccctcccgcctcccccccttacc
ccccccgcgcccttctttttcttttttcattCTTCTGCTTCACTTTCTGG
GACACCGCATCGACGACACATTCTTTCTTTCCGTTCCTGAAccgtgccct
cctccctttccatcggTAGGCTTCCTGCTGTCCGAGGGCCGTCGGACTTT
TCGGGCCCTCCCCACGTTGTTTTCCAGCGCCAGCCCCTGGGGGTTCCGCA
CTTTTCTCATCTCCATCCTCGTCTTGCTTGCGCTCGGTAGAtttgaaagg
agggagggagaaagggaggg back to topCoding sequence (CDS) from alignment at CM002471.1:594552..595121+ >rna7441 ID=rna7441|Name=rna7441|organism=Nannochloropsis gaditana|type=CDS|length=404bp|location=Sequence derived from alignment at CM002471.1:594552..595121+ (Nannochloropsis gaditana)
ATGGCACCGGCTTttatctcctccccttcctcccctccgtctctgcCAGA
ACCCCGTGGTCGGCCACCAGGGTCCGCGTCAGGTATAAggctccgtcctc
ctgccattcctccctcccgcctcccccccttaccccccccgcgcccttct
ttttcttttttcattCTTCTGCTTCACTTTCTGGGACACCGCATCGACGA
CACATTCTTTCTTTCCGTTCCTGAAccgtgccctcctccctttccatcgg
TAGGCTTCCTGCTGTCCGAGGGCCGTCGGACTTTTCGGGCCCTCCCCACG
TTGTTTTCCAGCGCCAGCCCCTGGGGGTTCCGCACTTTTCTCATCTCCAT
CCTCGTCTTGCTTGCGCTCGGTAGAtttgaaaggagggagggagaaaggg
aggg back to top
|