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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101384g2.8955.mrna |
| Orig protein id | gnl|cribi|Naga_101384g2.8955 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:592416..593448 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7440 ID=rna7440|Name=rna7440|organism=Nannochloropsis gaditana|type=mRNA|length=482bp
AGGTAAATTTCCCTCCTAATTGAACAATTTTGACTTCACACCACCAGGCA
GGGATGGTTTTGGAGTTTGACTAAACGTTGGATGCTGTTGCGTGTCTCAG
TCGCGATGCCGTCCTGGAGTCATGGACCCTGAAACTCGATCGCCTTCGTT
CCACGACTCAAGCTCCTATTTTCTGGGACATCCTGGTCAGCCAAGGAGGA
AGAAGGGTGCAATCCATGTTAAAAGCACGGCCTGGACGTTGGGGCAGGGG
CCACCTTGGATGCGGGCCCAGACCCCGACCGTTGAATTCCGCCGGGTCAG
CCTCTTCCTTCTCTTCCTGTATATCTCCTTGATCCACGCTGTGACTCCTC
AGGCCTTCCATGCACCATGGCGCCCGTGTTTTACGTGGCGGTCTTGTCGA
CTACTTCCTGGCTGCTTCTCCTCCTCCTCCTCCCTCTTCTCCTCCTCCTC
CTCTTCCCCTTCCCACATTTTCTCTCCCGTCT back to topprotein sequence of rna7440 >rna7440-protein ID=rna7440-protein|Name=rna7440|organism=Nannochloropsis gaditana|type=polypeptide|length=146bp
MVAMKLCVWWSIHVNEWQIKGGLQVPPPSLPPSLPPSLPSFLPYPLPGPS
PAWKRGRERGRERGREGGREGGKEGGGRAAAAYKRTLISLESCVCIYVLW
KRVRVPPGRREGMTHIFYFLKRRFCPTITHAFKVNGILNKEDHDRE back to topmRNA from alignment at CM002471.1:592416..593448+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7440 ID=rna7440|Name=rna7440|organism=Nannochloropsis gaditana|type=mRNA|length=1033bp|location=Sequence derived from alignment at CM002471.1:592416..593448+ (Nannochloropsis gaditana)
AGGGAGCAAGGGGTCAAGTCTGACGCCAGTCGACGCCCTACCTGGGAGCC
GGCACCGAATGCATGTAAAATAAAAATAataaaaaggagagggacggggg
ggaaggaccttGAGAAGCTCCTCGTGCGTGTTTGAAATGGTGGCGATGAA
ATTGTGCGTGTGGTGGTCGATCCATGTGAATGAATGGCAAATTAAAGGCG
GCCTGCAggttccccctccctccctccctccctccctccctccctccctt
ccttccttccttccttaccCCCTCCCCGGTCCTTCCCCAgcgtggaaaag
ggggagggagagagggagggagagagggagggagggagggagggagggag
ggaaggagggaggggggcgtgcAGCTGCTGCTTATAAGAGAACTTTGATT
TCTCTCGAATCGTGTGTATGCATATATGTCTTGTGGAAACGGGTCCGGGT
GCCGccagggcgaagggagggcatgacacacattttttattttttaaaaa
ggcGTTTCTGCCCTACGATCACCCATGCATTTAAAGTAAATGGTATTTTA
AATAAAGAAGATCATGATCGTGAATGATAATTTAAATAATATAGCAGCCg
gaccccccccggccaAATTTTCCACAACGAAAAAAAGTagcgagagaaag
ggaatACTTGCCTCGCCACGCGAACCCGAAGGCCGAAGGCGCTTCGGATG
ACGATGGAAGGCACCGTCCGTGGAACTTGACGGCGCGGCCTGAAAGTGAT
GGCGATGTCCTTCCCGGCTCATCACCCTCGAGGCGACCATggcagaaggg
agaggggcaggaggggaagagggagggagggagggggggagggagagaga
ccTCGACCGAGCCTATCCCCTGGCGTGGGCTATTTGCGTCCAAGGAAAGG
CATTGCACGAATGAGAATGGGTCATGCATGAGccgaagggggaagagggg
ggtaGGCGGGAGCTCGCGCAGCAATGCAGAGAGGATGTCTGTATGAGCCT
GGAACAAAGACGTGCACATTGACAGTGAGATGG back to topCoding sequence (CDS) from alignment at CM002471.1:592416..593448+ >rna7440 ID=rna7440|Name=rna7440|organism=Nannochloropsis gaditana|type=CDS|length=441bp|location=Sequence derived from alignment at CM002471.1:592416..593448+ (Nannochloropsis gaditana)
ATGGTGGCGATGAAATTGTGCGTGTGGTGGTCGATCCATGTGAATGAATG
GCAAATTAAAGGCGGCCTGCAggttccccctccctccctccctccctccc
tccctccctcccttccttccttccttccttaccCCCTCCCCGGTCCTTCC
CCAgcgtggaaaagggggagggagagagggagggagagagggagggaggg
agggagggagggagggaaggagggaggggggcgtgcAGCTGCTGCTTATA
AGAGAACTTTGATTTCTCTCGAATCGTGTGTATGCATATATGTCTTGTGG
AAACGGGTCCGGGTGCCGccagggcgaagggagggcatgacacacatttt
ttattttttaaaaaggcGTTTCTGCCCTACGATCACCCATGCATTTAAAG
TAAATGGTATTTTAAATAAAGAAGATCATGATCGTGAATGA back to top
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