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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100460g2.10048.mrna |
| Orig protein id | gnl|cribi|Naga_100460g2.10048 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:578132..580663 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7436 ID=rna7436|Name=rna7436|organism=Nannochloropsis gaditana|type=mRNA|length=704bp
CATCCTCCCTCTCATCTCCGGCCCCTCTTCCTTGCTTCTTTTCTTTCCAG
GTTGTCGAAAGCGGAGCCACGTTCAAGAAGAGGAATTTCACCCTGGGCGG
GTTCGCGCTCCAGACTAAGAAGGTGTTCGTGCGCGTCAAGCAGGAGGAAG
GGAATTGCACCCTTCTTTACAGGCAGGCTGATGACATGCGCACGGCGGGC
ACAGAAATCCAAGCTGGGGACATCAAATCCATCGACGCCAACGGCGCCAA
GAGTATGACGGTCCTGTCTAAGACAGGGGATGTGCTTCTTGAGATCGAGG
CGGCGGAGGAGGCGCAGCGAGATCTATGGCTGACGGCGCTGAACGAGGTT
TTGCTTCATAACTTCAAGGTGATGGGCGAGGACGGGGTCGTGCGGGGGCA
GCCCCGGAACATGAAGGAGAGGGCAGAGAAAGAGCTTTACTTTCAGAGGC
GCCAAAAAGACATCGAGCTCAAAAGGAAGAGTACCGAAGCCAAGAAAGCT
AAGTTCATGAAGGAAGCTGGGGGCTTGAAATATACAGCGCTACATATGGC
GGGAAGAGCGAACACGGCCGCGGGAGTCTCAGACGAAGAAGCGGGAGGAG
GTGGAGGTGGGGATGGCCCCAGCTAATGGTGAGGATGGAGGTTTGGACGT
TGCTAGGAACGTTGTAGCAATATGAAACAAAGAAAAAATAGACTCGACCT
AGAA back to topprotein sequence of rna7436 >rna7436-protein ID=rna7436-protein|Name=rna7436|organism=Nannochloropsis gaditana|type=polypeptide|length=648bp
MRPISCRIPGIGTFLFQDDSGTSAVMTRPPYTCLPSETQEQMKTEAYAAV
LAVCGMMAPGDKVALLTTVLRASKTYRNRYGLRKALFGLRPVDLEGMETT
VWQRTDDDEANTQSISHPSALRKRDRSDQNSVLSEERAAHDSKCPPPQQP
QEAIYQNIGAVMKHTSEGNKRRMHLHRSSPLHDTPNKGKPTPWEKLAVPL
TPVLPSASGSFWISIDKNQRRKRTSFRRASRSYRAKIFKVTYELIQAVVE
KFCPGVGRLDLLDRLSEVHQSKLSHMERNQLDGYAHHHSDSFSVKAPRRD
TPKSAGKKGRDVRGGIDEPMTEHPLSMEKKSSSSLAPLDGERIDRMRATQ
SSSMAGLTSFIDSEATKQAADYQNPSHAFATAKSLPLSVPYVHAPSLEVL
TSMAQYVSEQVMALRPKTAAVSALPACKAGVVSGGGGGVRATAAGSVAHK
VSEATALDGKEVKRGSVVSAITSSPVSGTATGRTAKLELDRTRLWSQAFP
TSNRCPDIQDLQPLLQPPLREEKRHRPQNSPSPSPLSEDNTEQPLKPWQQ
LLQALQKQISSSVPQSDAWNMVSCHPSHLGVPRGFPAQRPAPPSWQTRSL
PQPHVPPLSSDYTVKGVFRPPFVPVSEASSNEVSILGPSLHTSASFHH back to topmRNA from alignment at CM002471.1:578132..580663- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7436 ID=rna7436|Name=rna7436|organism=Nannochloropsis gaditana|type=mRNA|length=2532bp|location=Sequence derived from alignment at CM002471.1:578132..580663- (Nannochloropsis gaditana)
TTTACCAATGACTTAAGCGTGTGTGTGCGCCCTCGAATGCATGATACTTC
GATGCAATCGAGTCATTGACATTTCTCTCATGTCTCCTACCTTTTCACAC
GTACATTTCTAGCCATGAGACCCATCTCCTGCCGCATTCCGGGCATCGGT
ACTTTTCTCTTTCAGGATGACTCTGGCACCTCTGCCGTCATGACCCGCCC
TCCATACACATGCCTTCCGTCAGAAACCCAAGAGCAAATGAAAACAGAGG
CTTATGCAGCTGTCCTGGCAGTCTGTGGGATGATGGCGCCGGGGGACAAA
GTCGCGTTGCTCACGACAGTATTGCGGGCGTCAAAGACGTACCGGAATCG
GTATGGGCTGAGGAAAGCATTGTTTGGCCTCCGTCCAGTAGACCTGGAGG
GCATGGAAACGACAGTATGGCAGAGGACAGACGATGACGAGGCCAACACC
CAGTCCATCTCTCATCCATCTGCTCTTCGTAAGCGGGACAGAAGTGACCA
GAATTCCGTGCTAAGCGAGGAAAGAGCAGCACATGATTCGAAATGCCCAC
CGCCCCAGCAGCCCCAAGAAGCAATATATCAAAACATTGGCGCCGTCATG
AAGCATACCAGTGAAGGGAATAAGAGAAGAATGCATCTGCACAGGTCCTC
TCCCCTACATGACACACCTAACAAGGGAAAGCCTACTCCGTGGGAAAAGC
TCGCTGTCCCACTTACCCCCGTCTTGCCTTCTGCGAGCGGCTCTTTCTGG
ATCAGTATCGACAAGAATCAGCGTCGAAAACGCACAAGCTTCCGCCGCGC
TTCTCGGTCGTACCGGGCCAAAATCTTCAAGGTGACATACGAGCTTATCC
AGGCGGTCGTCGAGAAGTTCTGTCCAGGCGTAGGGCGGCTCGATCTGCTG
GATCGGCTCTCGGAAGTGCATCAATCAAAGCTATCGCACATGGAAAGAAA
TCAGCTAGATGGATACGCTCACCACCACTCGGATAGCTTCAGTGTCAAAG
CGCCTCGACGAGACACTCCAAAGAGTGCGGGGAAGAAAGGCAGGGACGTT
AGAGGAGGTATCGATGAGCCGATGACCGAGCACCCGCTGTCGATGGAAAA
GAAGTCATCGTCCTCACTTGCACCCTTGGATGGAGAGCGAATAGATCGAA
TGCGTGCCACTCAATCGAGCAGCATGGCGGGTTTGACGTCCTTTATCGAT
AGCGAGGCGACCAAACAGGCTGCAGACTACCAGAACCCTTCGCATGCATT
TGCCACGGCGAAGTCCTTGCCCTTGTCTGTCCCCTATGTGCACGCCCCGT
CTTTGGAGGTCCTGACAAGTATGGCTCAATATGTTTCGGAGCAAGTCATG
GCTCTAAGGCCAAAGACAGCAGCAGTGTCGGCGCTCCCGGCATGTAAAGC
CGGCGTTGTGAGTGGAGGAGGGGGAGGCGTACGAGCCACAGCGGCAGGAT
CTGTGGCACATAAGGTGTCGGAAGCCACAGCTTTGGACGGAAAGGAGGTG
AAAAGAGGGTCTGTGGTGTCTGCTATCACTTCTTCGCCTGTATCTGGCAC
TGCTACTGGCCGCACAGCCAAGCTGGAGTTGGATAGGACACGGCTATGGT
CACAGGCATTTCCCACCAGCAATCGTTGTCCTGATATCCAAGATCTGCAA
CCTCTTCTGCAGCCTCCGTTGCGCGAAGAAAAGCGGCATCGGCCACAAAA
CTCCCCGTCACCCTCCCCTCTGTCCGAGGACAACACCGAGCAACCTCTGA
AGCCATGGCAGCAGCTGCTCCAGGCACTGCAAAAGCAAATCTCATCGTCA
GTGCCCCAAAGCGACGCTTGGAATATGGTCTCTTGCCATCCCTCACACCT
TGGTGTGCCTCGCGGCTTTCCCGCCCAACGCCCTGCGCCTCCATCCTGGC
AGACAAGATCTCTACCTCAACCCCATGTTCCTCCTTTGTCGTCTGACTAC
ACTGTAAAGGGGGTCTTCCGTCCTCCTTTCGTCCCTGTCTCGGAAGCTTC
CTCCAACGAAGTCTCCATTCTTGGTCCGTCATTGCACACAAGCGCGTCTT
TCCATCACTAGGCATATCTCCATGACATGAATCACTCAAGCATTTTCTGA
CGAGTACTGTGAGGGCCTGAAGCGGCAGATCTCATGTAGTTGATATCCAA
GGGCATTGACACAAAGCAAGAGAGTTTTCTGTATATATGTGACGAACTAA
GTGATGCGGTAATTCGCTTCAAGGAAGTCCCCATTATTGGCCCGTGATCG
GACACAAAGGCGATATTCCATTACTAGGCATATTTCCATTGGTCCAATAG
ATCTTACATTTCCTGATAAATATTGCGAGGGATAGGAGCGGATGGTCTCA
TGTAGTTGATTTCCAAGAACAATGCAAAACAACGAAGCCCCCTTTTTAGA
AATAACGTCATGGACAAAAGACAGGAGCTGAAATCCCCAAAGCGCGTTGG
CCAAAGAACGGCTTTCCCGTGGATCGATATTTCAGTAGGGGTAACGGGTA
TTTGAAAAAATCCATTGAAAAACCGGTAGAGC back to topCoding sequence (CDS) from alignment at CM002471.1:578132..580663- >rna7436 ID=rna7436|Name=rna7436|organism=Nannochloropsis gaditana|type=CDS|length=1947bp|location=Sequence derived from alignment at CM002471.1:578132..580663- (Nannochloropsis gaditana)
ATGAGACCCATCTCCTGCCGCATTCCGGGCATCGGTACTTTTCTCTTTCA
GGATGACTCTGGCACCTCTGCCGTCATGACCCGCCCTCCATACACATGCC
TTCCGTCAGAAACCCAAGAGCAAATGAAAACAGAGGCTTATGCAGCTGTC
CTGGCAGTCTGTGGGATGATGGCGCCGGGGGACAAAGTCGCGTTGCTCAC
GACAGTATTGCGGGCGTCAAAGACGTACCGGAATCGGTATGGGCTGAGGA
AAGCATTGTTTGGCCTCCGTCCAGTAGACCTGGAGGGCATGGAAACGACA
GTATGGCAGAGGACAGACGATGACGAGGCCAACACCCAGTCCATCTCTCA
TCCATCTGCTCTTCGTAAGCGGGACAGAAGTGACCAGAATTCCGTGCTAA
GCGAGGAAAGAGCAGCACATGATTCGAAATGCCCACCGCCCCAGCAGCCC
CAAGAAGCAATATATCAAAACATTGGCGCCGTCATGAAGCATACCAGTGA
AGGGAATAAGAGAAGAATGCATCTGCACAGGTCCTCTCCCCTACATGACA
CACCTAACAAGGGAAAGCCTACTCCGTGGGAAAAGCTCGCTGTCCCACTT
ACCCCCGTCTTGCCTTCTGCGAGCGGCTCTTTCTGGATCAGTATCGACAA
GAATCAGCGTCGAAAACGCACAAGCTTCCGCCGCGCTTCTCGGTCGTACC
GGGCCAAAATCTTCAAGGTGACATACGAGCTTATCCAGGCGGTCGTCGAG
AAGTTCTGTCCAGGCGTAGGGCGGCTCGATCTGCTGGATCGGCTCTCGGA
AGTGCATCAATCAAAGCTATCGCACATGGAAAGAAATCAGCTAGATGGAT
ACGCTCACCACCACTCGGATAGCTTCAGTGTCAAAGCGCCTCGACGAGAC
ACTCCAAAGAGTGCGGGGAAGAAAGGCAGGGACGTTAGAGGAGGTATCGA
TGAGCCGATGACCGAGCACCCGCTGTCGATGGAAAAGAAGTCATCGTCCT
CACTTGCACCCTTGGATGGAGAGCGAATAGATCGAATGCGTGCCACTCAA
TCGAGCAGCATGGCGGGTTTGACGTCCTTTATCGATAGCGAGGCGACCAA
ACAGGCTGCAGACTACCAGAACCCTTCGCATGCATTTGCCACGGCGAAGT
CCTTGCCCTTGTCTGTCCCCTATGTGCACGCCCCGTCTTTGGAGGTCCTG
ACAAGTATGGCTCAATATGTTTCGGAGCAAGTCATGGCTCTAAGGCCAAA
GACAGCAGCAGTGTCGGCGCTCCCGGCATGTAAAGCCGGCGTTGTGAGTG
GAGGAGGGGGAGGCGTACGAGCCACAGCGGCAGGATCTGTGGCACATAAG
GTGTCGGAAGCCACAGCTTTGGACGGAAAGGAGGTGAAAAGAGGGTCTGT
GGTGTCTGCTATCACTTCTTCGCCTGTATCTGGCACTGCTACTGGCCGCA
CAGCCAAGCTGGAGTTGGATAGGACACGGCTATGGTCACAGGCATTTCCC
ACCAGCAATCGTTGTCCTGATATCCAAGATCTGCAACCTCTTCTGCAGCC
TCCGTTGCGCGAAGAAAAGCGGCATCGGCCACAAAACTCCCCGTCACCCT
CCCCTCTGTCCGAGGACAACACCGAGCAACCTCTGAAGCCATGGCAGCAG
CTGCTCCAGGCACTGCAAAAGCAAATCTCATCGTCAGTGCCCCAAAGCGA
CGCTTGGAATATGGTCTCTTGCCATCCCTCACACCTTGGTGTGCCTCGCG
GCTTTCCCGCCCAACGCCCTGCGCCTCCATCCTGGCAGACAAGATCTCTA
CCTCAACCCCATGTTCCTCCTTTGTCGTCTGACTACACTGTAAAGGGGGT
CTTCCGTCCTCCTTTCGTCCCTGTCTCGGAAGCTTCCTCCAACGAAGTCT
CCATTCTTGGTCCGTCATTGCACACAAGCGCGTCTTTCCATCACTAG back to top
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