rna7434, rna7434 (mRNA) Nannochloropsis gaditana

Overview
Namerna7434
Unique Namerna7434
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length264
Alignment locationCM002471.1:574360..575320 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101598g1.2632.mrna
Orig protein idgnl|cribi|Naga_101598g1.2632
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:574360..575320 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101598g1gene7193Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7434rna7434-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23257.1cds7416Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7434 ID=rna7434|Name=rna7434|organism=Nannochloropsis gaditana|type=mRNA|length=264bp
TCCCCAGTTGATGCGTCTGGTCTGCGATCTCTACCCTTTCAGCAAGTACG
GCCCCTACCTGGTCGCTGCCCTCGGCACCAAGAACCTCCGAAGCCGCGCG
GCCTGCCTCGACGAATGCCGTCGGCTCCTGGACTACGGCCCTGCGTCTGC
CCTGGGGAAACGAGGGTTGCGGGAGATTGGCAAGTATCTCGACGCGCGAG
AACCAGAGGTTCGATCCGCTGCCCTCGAGGTCATACTTGAGGTCTTCGAA
AGGTAACCCTTCCT
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protein sequence of rna7434

>rna7434-protein ID=rna7434-protein|Name=rna7434|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MDTVCKRSAACRCPDCAAASAAFSIDDLRALAPSRSVYDDDDNGDTSNPP
PPSRPVCASPSGAAPPPVPGRHPRRHQGADPVKTEGEAVAVPYPTRKGPM
RRSSSEPEDPIPVPPPASSPAPGSESRQGQPSPPSKLITHTTGPPASTTG
MPTAPNEYAELLPSS
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mRNA from alignment at CM002471.1:574360..575320-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7434 ID=rna7434|Name=rna7434|organism=Nannochloropsis gaditana|type=mRNA|length=961bp|location=Sequence derived from alignment at CM002471.1:574360..575320- (Nannochloropsis gaditana)
TTAGACACACCACAGGTCCGCTTTCCCCTATAGTAAAAAACTGAGAACAT
TTGAATAGATAGCCAGGACAGATTAAAGGCATTTCCTTGGCCTGATTGTG
GACATCTACATTTTTTGCGACTGTCAATCCCTCTCTCCCTCGGCGACCCG
CACAGAGAGAAAGAGGACGATCCAGCCTTACTTGCTTCAAAACCTTCCGA
CACCTGCCCATTCTGGCGCTGCACACCCGTCACAACAAGGAGAACATCCT
TTCGGGCTCCCTTTGTCCTTCCGCACCCACAGCCAAGACCATGGACACGG
TCTGTAAACGGAGTGCCGCCTGTCGATGCCCCGACTGTGCGGCGGCATCT
GCTGCATTTTCCATCGACGATTTGCGGGCCCTGGCCCCTTCCCGTAGCGT
CTACGACGACGATGACAATGGAGACACGTCGAATCCACCGCCTCCATCTC
GTCCTGTTTGTGCTTCTCCGTCAGGGGCAGCACCCCCTCCTGTGCCGGGC
CGGCACCCGCGCCGACACCAGGGAGCCGACCCTGTGAAGACAGAGGGGGA
AGCTGTGGCGGTGCCATATCCCACGCGCAAAGGTGAGACAAGGAAGGATG
TTAAAATGCACCCTGTTTTCCCACGAGACGCGCCAAATGGATGCCCCCAG
GCCGGTTGAACCCATCTCCCTTTCTCCCTCCCTCCCTCCTTCCTTCCCTC
CTCCCCTCCCTCCCTCCCTCCCTCCTCCCCTCCCTCCTCCCCTCTCTCCC
TGCGCCAGGCCCCATGCGCCGCTCCTCCAGCGAGCCCGAAGATCCCATTC
CCGTCCCCCCCCCTGCCTCGTCGCCCGCCCCGGGCAGCGAAAGCCGACAG
GGACAACCCTCCCCACCTTCCAAACTCATCACACACACGACCGGCCCCCC
GGCGTCGACGACGGGAATGCCCACAGCTCCGAATGAATACGCCGAGCTTC
TCCCTTCCTCC
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Coding sequence (CDS) from alignment at CM002471.1:574360..575320-

>rna7434 ID=rna7434|Name=rna7434|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002471.1:574360..575320- (Nannochloropsis gaditana)
GCCCCATGCGCCGCTCCTCCAGCGAGCCCGAAGATCCCATTCCCGTCCCC
CCCCCTGCCTCGTCGCCCGCCCCGGGCAGCGAAAGCCGACAGGGACAACC
CTCCCCACCTTCCAAACTCATCACACACACGACCGGCCCCCCGGCGTCGA
CGACGGGAATGCCCACAGCTCCGAATGAATACGCCGAGCTTCTCCCTTCC
TCCATGGACACGGTCTGTAAACGGAGTGCCGCCTGTCGATGCCCCGACTG
TGCGGCGGCATCTGCTGCATTTTCCATCGACGATTTGCGGGCCCTGGCCC
CTTCCCGTAGCGTCTACGACGACGATGACAATGGAGACACGTCGAATCCA
CCGCCTCCATCTCGTCCTGTTTGTGCTTCTCCGTCAGGGGCAGCACCCCC
TCCTGTGCCGGGCCGGCACCCGCGCCGACACCAGGGAGCCGACCCTGTGA
AGACAGAGGGGGAAGCTGTGGCGGTGCCATATCCCACGCGCAAAGGCCCC
ATGCGCCGCTCCTCCAGCGAGCCCGAAGATCCCATTCCCGTCCCCCCCCC
TGCCTCGTCGCCCGCCCCGGGCAGCGAAAGCCGACAGGGACAACCCTCCC
CACCTTCCAAACTCATCACACACACGACCGGCCCCCCGGCGTCGACGACG
GGAATGCCCACAGCTCCGAATGAATACGCCGAGCTTCTCCCTTCCTCCAT
GGACACGGTCTGTAAACGGAGTGCCGCCTGTCGATGCCCCGACTGTGCGG
CGGCATCTGCTGCATTTTCCATCGACGATTTGCGGGCCCTGGCCCCTTCC
CGTAGCGTCTACGACGACGATGACAATGGAGACACGTCGAATCCACCGCC
TCCATCTCGTCCTGTTTGTGCTTCTCCGTCAGGGGCAGCACCCCCTCCTG
TGCCGGGCCGGCACCCGCGCCGACACCAGGGAGCCGACCCTGTGAAGACA
GAGGGGGAAGCTGTGGCGGTGCCATATCCCACGCGCAAAG
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Synonyms
Publications