rna7432, rna7432 (mRNA) Nannochloropsis gaditana

Overview
Namerna7432
Unique Namerna7432
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length840
Alignment locationCM002471.1:569624..570514 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102326g1.5804.mrna
Orig protein idgnl|cribi|Naga_102326g1.5804
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:569624..570514 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102326g1gene7191Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23259.1cds7414Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7432rna7432-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7432 ID=rna7432|Name=rna7432|organism=Nannochloropsis gaditana|type=mRNA|length=840bp
ATAGCCCGCCCTGGCATGATCGACCTCCACAACCGGACCCTGCCAGTGGC
GCGCACGGCAGTCCGGGACGTGTACGAGGTGGCATTGGGGGAATGGAGGG
AGGGCGGGAGGGAGGGCGGGAGGAAGGGGGGGAGGGAGGGCGCGAAGGAG
GGCGGGGGGTCTCCCTTGGTGGCGTTGTTGGGTGCGGAGAACGCGCAAAG
TGGGTTCTTGGAAATCATCACCGGACAAGGAGATGCTCGACTGGCCTTTC
CTCCGTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTTTTC
TCCCCTTCTTCTTCCTCCTCCCCTCCCCGTCTACTCACGCCCGCTATCCT
CACGCTCTTGAATGACGACTTCCATCCTGCTCAGGGCGCCTCTCTCAAAC
CAGGAAATCCGGGTAGGATTTTAGTCCCACTCGCCAATGTCAAACGGTGG
ATGGACTTCCATTCCCTCTCCTTGGAACAGCGTCGTAAACGCCTTCGGAG
GCACATTGAGAAGGAGGGAAGGGCAAAGGGAGGGAAGGAGAGTCGGGCAG
AGGGAGGGAAGGAGGGCGTGGGACAGGGCGGGCAGGATAGCTCTTCCTCG
TCACCCTCCCCGGCCCACCAAAAAAAGCAGGCGCGTTTGACAAGGAGACA
GAGTGCCTCCATCCAGGGATATATACAGCGACATCCCCAGGCGCGAAGCC
TCATTCTCTCCCTCCCTCCCTCCCTCCGCCGGGACTGGGGCGAGCTGGGC
GGAGGGAGGGAGGGAGGGCAGGAGGGAGGAAGGGAGGGAGGGCAGAAGGG
AGGGAGGGAGGGAGGGAGAGAGGGAGGGTCAGGAGGATGA
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protein sequence of rna7432

>rna7432-protein ID=rna7432-protein|Name=rna7432|organism=Nannochloropsis gaditana|type=polypeptide|length=80bp
MIKREGCLAERKVKRGDCLPHIRWSCVYGERREEGREEKGGEEEEEGEEG
EEEEEEEEEEEEVKENQGGRSSGREPARKN
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mRNA from alignment at CM002471.1:569624..570514-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7432 ID=rna7432|Name=rna7432|organism=Nannochloropsis gaditana|type=mRNA|length=891bp|location=Sequence derived from alignment at CM002471.1:569624..570514- (Nannochloropsis gaditana)
GAGGGGTTGCACGGTTTGGAGAGAGCACGCAGGCACGGAGGAGAGAAGCG
GCATAAGAAATTAGGCGCGCGCAAATAAGGAGAGGGTACGGGAGAAAGTC
GAGTAGAGAGAGAGGAAATGCCTGCGTGGAACGGGGTCGTGGAAGCTGGG
AGGACAATAGCAAGGACGCAGGGGAGGGAGGAAGGGAGGGAGGGAGGGAG
GGGGGAGGGAGGGAGGGAGGGAGGGAGGGTCAGGGAAAGCAGGCCCGGGG
AATTATATTGATAAGTGTAACGGATGACAGAGGGTGCGCACGCGTGACAA
ACTGTGAAACCTGAGGCTACTTTCGTAGAATGAAATCAAAGAAAAATGTG
GTAGGCGCGGAGGGCGGGGAAAGGGAGGAGGGAGGTGGGCTGTTGAAGGA
GGGAGAAAGCAAGACCAGTAATTGCCGAGTCGTTGCTTCTCCGATTTGAG
TGAGTGAAGAGAGAGTTCCCTGAGTGAGAGTAGAGAGTATGACATGGAAA
CGGGGGCATGATTAAGAGGGAAGGATGTCTGGCAGAAAGAAAGGTGAAGA
GGGGGGATTGTCTCCCACACATACGGTGGAGCTGCGTCTATGGAGAAAGG
AGGGAGGAAGGGAGAGAGGAAAAGGGAGGAGAAGAAGAAGAAGAAGGAGA
AGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAAAGG
AGAATCAGGGAGGACGCAGCAGTGGCAGAGAACCTGCGAGAAAGAATTGA
AATGAGAGTCAAAAAATTGTGACCCCTGTATCCGTAGAGCTTCCTACTGG
CATCTTCCAGGCAAAAGGAGGAGGCAGGGCAAGGGAGAGAGGGAAGACAA
GCCGGGCAAAGTCAACCATGAACCTATCCATCGCCGAACTC
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Coding sequence (CDS) from alignment at CM002471.1:569624..570514-

>rna7432 ID=rna7432|Name=rna7432|organism=Nannochloropsis gaditana|type=CDS|length=243bp|location=Sequence derived from alignment at CM002471.1:569624..570514- (Nannochloropsis gaditana)
ATGATTAAGAGGGAAGGATGTCTGGCAGAAAGAAAGGTGAAGAGGGGGGA
TTGTCTCCCACACATACGGTGGAGCTGCGTCTATGGAGAAAGGAGGGAGG
AAGGGAGAGAGGAAAAGGGAGGAGAAGAAGAAGAAGAAGGAGAAGAAGGA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAAAGGAGAATCA
GGGAGGACGCAGCAGTGGCAGAGAACCTGCGAGAAAGAATTGA
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Synonyms
Publications