rna7429, rna7429 (mRNA) Nannochloropsis gaditana

Overview
Namerna7429
Unique Namerna7429
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length773
Alignment locationCM002471.1:566157..566686 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102812g1.1245.mrna
Orig protein idgnl|cribi|Naga_102812g1.1245
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:566157..566686 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102812g1gene7188Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23262.1cds7411Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7429rna7429-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7429 ID=rna7429|Name=rna7429|organism=Nannochloropsis gaditana|type=mRNA|length=773bp
GGACGTTACCCAGCTCCAACCTTACCGGGAAGGCAACATCTTGCTCCCCT
CCCTCCCTCCCTCCAGTCCTGGCGCTACACCCAAACCCGCGTCCCGGGCA
CCTCCTCTGCTCTCACCTGGTCTACGGCTATGCTCCCTGCGGGGGAATGG
CTCTACCTCGTTGGAGTAGCGGGCAAAGGCATCGACGCCACCCAGGTTCC
TTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTTCCTGCTCACCCCCT
TTTCCCCCCTCGGTTTCCATAGGTGCTGGCCCGCCTTCCGCTCTCCTCCC
TCCTCCCTTCCTCCTCCCTTTCCTCCTCCCCTTCCTCCTCCCCTTCCTCC
TCCCCGTCCTCCTCCCCGTCCTCCCCTTACGCCTTCAACGCCTCGTCCAT
GGAAGTCTGGGTACATTCCCCTCCTTCCTCCCCCCCTTCCTCCTCCCCTC
CCTCTCCCCCACCCTCCCGCTGGATCCCGCTCCAGACCTACCTGGCCGCA
AGCCCTCCCTCCTCTTCTCCCTCTCCTCCCCTCCCTCCCTACGTCCTCAC
CCCCCTCTTTCCACCGGGTACCCTGGGAGTCACCGAGGCTGGCTTGATCT
TCCACGAGCGCCTGAATCGCTACTTGATGGTCACCCTCCCGGCTTTCGCC
AACAAGCTCTACATGTGGACGAGCCCCTCTCTGACAGGGCCTTGGGTGGC
GACAGAGCTATTGGACGTGGAGGAGTTTGAGAAAGAATTTCAGACGTTGA
AGGTTCGGACGAGGGTCTGGCGG
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protein sequence of rna7429

>rna7429-protein ID=rna7429-protein|Name=rna7429|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
RAFARMSPLLRSIGRVFLDGNGAPRISPSLPPSYLPLLFPSLLGLACAIM
ISTYEGGKYWMLRKKVPDGELPLSPSRPPSHPPPAVKSSDGSGGVADGDK
GGRKGGREGGRASAVIGGRGEEKNLVR
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mRNA from alignment at CM002471.1:566157..566686-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7429 ID=rna7429|Name=rna7429|organism=Nannochloropsis gaditana|type=mRNA|length=530bp|location=Sequence derived from alignment at CM002471.1:566157..566686- (Nannochloropsis gaditana)
AGGGCGTTTGCACGGATGTCGCCGCTTCTTAGGAGCATTGGTCGTGTCTT
CCTCGACGGCAATGGCGCCCCCCGTATCTCTCCTTCCCTCCCTCCCTCTT
ACCTACCTCTTCTCTTTCCCTCCCTGTTAGGACTGGCGTGCGCGATAATG
ATTTCCACTTACGAAGGGGGAAAGTACTGGATGTTGAGGAAAAAGGTCCC
AGACGGCGAACTCCCCCTCTCTCCCTCCCGCCCTCCCTCCCACCCTCCAC
CCGCAGTCAAGTCGAGCGATGGAAGTGGGGGTGTGGCAGACGGGGACAAG
GGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGCATCGGCGGTCATAGG
GGGAAGGGGGGAGGAAAAGAATCTTGTAAGATAAGTCTGCGAGGAGGGAG
GAAGGGGAGAGAGTAAGGAGAAAGAGGAGAGGGAGGGAGCAATGCGAGGC
GCAAGGATGAGTAATCGAGTCGTGTGCGGCCGTGTAAATAGCAAATTGAT
GAGGAAAAGAAAGCAGCTCTTAGACTTGTG
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Coding sequence (CDS) from alignment at CM002471.1:566157..566686-

>rna7429 ID=rna7429|Name=rna7429|organism=Nannochloropsis gaditana|type=CDS|length=384bp|location=Sequence derived from alignment at CM002471.1:566157..566686- (Nannochloropsis gaditana)
AGGGCGTTTGCACGGATGTCGCCGCTTCTTAGGAGCATTGGTCGTGTCTT
CCTCGACGGCAATGGCGCCCCCCGTATCTCTCCTTCCCTCCCTCCCTCTT
ACCTACCTCTTCTCTTTCCCTCCCTGTTAGGACTGGCGTGCGCGATAATG
ATTTCCACTTACGAAGGGGGAAAGTACTGGATGTTGAGGAAAAAGGTCCC
AGACGGCGAACTCCCCCTCTCTCCCTCCCGCCCTCCCTCCCACCCTCCAC
CCGCAGTCAAGTCGAGCGATGGAAGTGGGGGTGTGGCAGACGGGGACAAG
GGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGCATCGGCGGTCATAGG
GGGAAGGGGGGAGGAAAAGAATCTTGTAAGATAA
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Synonyms
Publications