rna7408, rna7408 (mRNA) Nannochloropsis gaditana

Overview
Namerna7408
Unique Namerna7408
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2545
Alignment locationCM002471.1:506228..507398 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100158g1.7790.mrna
Orig protein idgnl|cribi|Naga_100158g1.7790
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:506228..507398 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100158g1gene7167Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23294.1cds7391Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7408rna7408-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7408 ID=rna7408|Name=rna7408|organism=Nannochloropsis gaditana|type=mRNA|length=2545bp
CATGTGGCGTAGCCTCTACTCACTCATGCGAAGAGAGAGTGCGGTGCAAG
CAGCCCCGGGTGGTGCAAGGGAAGGAGACGCCTCGAGAGCAGCATCGACA
CGGCCCCCCTCTTCCAGGTCCCCCTCCCAGGCCGCCCCCACCCCCTCCAC
GGATTCCACCCCGGCGTCTCTGCTCACTTCCAGCACCGGCACAGGCAGTA
GTCAGAGCATTGCGAGCCTCTCCATGGCCGCCGCCGCTGCTGTAGCGTCT
CCTGCGGCCTGGGCTGGGGTGCGGCGAGAATCGTGGCAGCCAAAAAGCGA
GCCGGAGGAGTGGGCGCGTCGTGGGCGTCAGAAGCGGGAGCGAAGCCTCC
TGCTCTTACTCCTCCTTGCCTATCAGGGGCGCGAGGAGCAGCGGGTGTGG
AATCCCTACCGGGCACTTCTGGAGACCTTGCAAGATGAGCGGTATCAGTA
CGGAGAAGGGGAAGAGGAGGAAAGGCCCGAGGGAGGGAGGGAAGGAGGGC
GAGGTGGAGGGGCTCCGGCACTCCTACGGCTTCCCTTTGACCGGCTTTTC
ACGGCGTTCGGCCGCCTGCTCCCCCTGGGCGAGCCCGCCCCCCTCCTCTT
CTATACGCTCCTCTCCTCTCCCAATCCGCTCTTTCTCTCCACCAGCCTGG
CCCAAGGGGACGTGGAAAGCCTCCTCCTTCCCCTCCTCCATCAGCTCTAC
CGCCCCGACCGCCTCCCCTCCCTCCCTCCCTCCCCCCGGCCCCTCTACCT
CCTCCTCACCATCCTCCTCCTCTTCTCCCAGGACTCGGCCTTCAACACGG
CCCTCTTCCGCCGCCATTTCCTCCCCTCCGTCCCTTGGTATAAGGAGAGG
CTCCTGGGCCGCACTTCGCTCGGCTCCCTCGCCCTCCTCTGCCTCCTCCG
CGCTCTCCTATTCGCGCTCCACCCGGCCCCCGCGCCCTCGCTTAAACCCA
TCCCAGAGACGCCCAGCACAAGCCCCACGACCAGCAGCAGCAGCCAGGAA
AGCACCAGCTCCCTCTACCTGCTCCAGACCTCCGGGGCCATCCTCCTGAA
TCTGGCGGCCCAGGCCGAGCATCTCCATGACTACGCCGCCCTCCGCCTCA
CGCAGGTTCTCCTCCTCCTCCTCCGCCGCTACGTCCGCCTGGTCGAAGGT
CTTCTTTCCTCCTCCTGTCCTCCGTTGCCGCTCCCAGCCGCCGGTGCTGT
CACGGCCGCTGCCCCCTCCTCTTTCCCTCCCTCCTCCTCCACCTCCCTTC
CTTCACACCACCCTCCGGGCCACTCAGCCGCCCTTTCCTCCTACTCCCCT
CCCTCCGCAGCGTCCTCCGACCCCAACCCCTCCCTCACCCACGCCCTCCT
CTCCTCTGGCCTGCGCACCCTCCTCTCCTTCTTCTCCATTGCCCTTTCTC
CCTCCCTGCTTCCCTCCAACCTGGCCCTCGTTCACTCCCTTCTCTACTCC
CGCCAACACTTGGAACCCCTCCTCGCCCACCCGGCCGTGCGAGCTCTGGC
TACCGCCTCCTTCCCGCCCTCCCTCCCGCCCTTCCCCTCTCCCTCCCACC
CCGTGCAGGAGGGAGGGGGGGGGGGCGGATTGGGGCTCGTCCCGGGGGTC
CTCGAATTTTTCGGTCGCCTCTTCGACGAGACGGAAGGCACGCTCTCGGT
GGAGCAAGCGATGCAGGTGCTGGAAAAGGGGGCGCGGGAGTGGGTGGGAG
GGAGGGAGGGAGGGAGGGCGGGCGGGTTGGGTGCGGGAATGGCGGCGGAC
CCAGAGCTGAAGTTCACGTACGAGGAGGAAACCGAGGCAGATTCCTTTTT
TGTGCCCTACATTTGGGAGACCATCTATACCATCACCAAAGAAGACCTCT
GGTGGATGCCTCAGTATATTCAGCTCTTTGGCCCCACCCCGTCGCCTTCG
CTCCCTCCTTCGGCGCCTCCTCCCCGCCCTCCTCCCTCGGACGCTGCCCC
GTCCTCGCAGGGAATGGTGCGCAGGCTGCTGGCAGGAACCATGAGCGTGA
TTCCGACCTCCCTCATTTCTTTGCCTCCCCCCTCGCGGGCCCAGAATCAG
CTTTCTCGGAATGGGCGGACGAGTACGGTCGATGCGGGTGCTGAGGAGGA
CGCGGGCCGCCCTTCCATTACCGCGTTGCCTGTGGTGGTGACCATGAACG
TGTAGTAGGGTTCAAAAAGGATCCGCGAAGGACAAGGACAGGGATCTGGC
GGCGGACATGCGGGTGTGGAAGGGTGGAGAATGGTGGATGGACACGACTC
AGGTCGCGAAATTGTCGAGGGGGGAGGACTTCGTTGGATGGAAGCGAGGG
AACGCCGCGAGGACGGGAACGAGAGGGGTTGGGCACGCAGGGGGCAGCGA
TCCAGCTGTTGAAAGCGTGTTCTCTAGGGGAAAGAATGAGAAACTTTTGT
TTTGGAAGGTAGAAATGTATAACGTGTGGAGTGTTGTGTGTGGAGTGACA
AGTAGGCCAGGGCGATAGGATGGTGGCCTGGGTGAAAATAAGGACGGCAC
AAGGGATGAGGCACGAAAAGCATATCAAAGTTGGTGTATCGTATA
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protein sequence of rna7408

>rna7408-protein ID=rna7408-protein|Name=rna7408|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MGGILADGGIFPDCYIACEANGGREGGKEGGREGGSVACAAHRSILAARS
ERMAAHFRFAEMGEGEKEGTPTFVFPSLSASTLKPFLTYLYTGRLPELEE
GREEGGEKSGRWRTETLMELAVVADEFLLPGLVRECEWELCLSQDYIKGE
GTEETGADAEVEAAARLFKLTNLLPGMSLLRAQSALRLVKGCKYVLQGMG
EGGCQDGEDEGEVLLKEAIDCLMDK
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mRNA from alignment at CM002471.1:506228..507398-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7408 ID=rna7408|Name=rna7408|organism=Nannochloropsis gaditana|type=mRNA|length=1171bp|location=Sequence derived from alignment at CM002471.1:506228..507398- (Nannochloropsis gaditana)
AGGGCGAGCGGGAGGGTGGGAAGGAAGGAAACAGGGAGAAAGATAAAGTG
TCGCTCCCTGAGGCGTTGGTCAAGAGGCTGCTGGGAAAGGGATGGGGCCC
TAGAGGGCCGATAATCTGGAGGGAGGTGGACGAGATCCTGGGCGGGTGGG
GGGAAGGCGGGAGGGAGGAGGGGAGGGAGGGAGGAAGGGAGGAAGGAAAG
GCGCTCCCCGGGGGGAGAACGGTCCTCCTCGTCTTTCAAGCTTAGCAATC
TCGACAGGTATAGAGTGCAAAAAGCGTGGCGGGTCTGGTGGAGGAAAGAG
CAGAAACGTCATACGGACCACGCCTGGAGGCCGCCCTACCCCCTTCCTCC
CCCCCTTCCTCACCCCGTCCTGCCTCCCCCCCTGGAGAGCCTCAGAATAG
ACATGGGAGGCATCTTGGCGGATGGGGGTATCTTTCCTGACTGTTATATT
GCCTGCGAAGCCAATGGGGGAAGGGAAGGAGGGAAAGAGGGAGGGCGGGA
AGGAGGGAGCGTCGCATGTGCCGCGCATCGAAGCATTTTGGCAGCGAGGT
CAGAACGGATGGCGGCTCACTTTCGTTTTGCGGAGATGGGAGAGGGCGAG
AAGGAGGGGACGCCCACGTTCGTATTCCCGTCGCTCTCTGCAAGCACGCT
CAAACCCTTCTTGACATATCTATACACGGGGCGCCTGCCGGAGTTGGAGG
AGGGGAGGGAGGAGGGAGGGGAGAAGTCGGGGAGGTGGAGGACAGAGACG
CTGATGGAGCTCGCTGTGGTGGCGGATGAATTTTTGCTCCCTGGCCTCGT
TCGCGAGTGCGAGTGGGAGCTCTGTTTAAGTCAGGACTACATTAAGGGGG
AGGGTACAGAAGAGACAGGGGCCGACGCAGAGGTGGAAGCGGCGGCGCGT
CTCTTTAAACTCACAAACTTGTTGCCAGGAATGAGCTTGTTGAGAGCTCA
ATCGGCTTTGAGACTTGTCAAGGGGTGTAAGTATGTGTTGCAGGGAATGG
GGGAAGGAGGATGTCAAGATGGGGAAGACGAGGGCGAGGTATTGCTCAAA
GAGGCCATTGACTGTTTGATGGACAAATAAGCGCGAGGGCACCCAGAAAT
TACCAACTGTGTAAATTATAATGTAACGAATAATTTTAAGAGTAAGGAAA
GCATTAATTTGAAACTTTTCC
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Coding sequence (CDS) from alignment at CM002471.1:506228..507398-

>rna7408 ID=rna7408|Name=rna7408|organism=Nannochloropsis gaditana|type=CDS|length=678bp|location=Sequence derived from alignment at CM002471.1:506228..507398- (Nannochloropsis gaditana)
ATGGGAGGCATCTTGGCGGATGGGGGTATCTTTCCTGACTGTTATATTGC
CTGCGAAGCCAATGGGGGAAGGGAAGGAGGGAAAGAGGGAGGGCGGGAAG
GAGGGAGCGTCGCATGTGCCGCGCATCGAAGCATTTTGGCAGCGAGGTCA
GAACGGATGGCGGCTCACTTTCGTTTTGCGGAGATGGGAGAGGGCGAGAA
GGAGGGGACGCCCACGTTCGTATTCCCGTCGCTCTCTGCAAGCACGCTCA
AACCCTTCTTGACATATCTATACACGGGGCGCCTGCCGGAGTTGGAGGAG
GGGAGGGAGGAGGGAGGGGAGAAGTCGGGGAGGTGGAGGACAGAGACGCT
GATGGAGCTCGCTGTGGTGGCGGATGAATTTTTGCTCCCTGGCCTCGTTC
GCGAGTGCGAGTGGGAGCTCTGTTTAAGTCAGGACTACATTAAGGGGGAG
GGTACAGAAGAGACAGGGGCCGACGCAGAGGTGGAAGCGGCGGCGCGTCT
CTTTAAACTCACAAACTTGTTGCCAGGAATGAGCTTGTTGAGAGCTCAAT
CGGCTTTGAGACTTGTCAAGGGGTGTAAGTATGTGTTGCAGGGAATGGGG
GAAGGAGGATGTCAAGATGGGGAAGACGAGGGCGAGGTATTGCTCAAAGA
GGCCATTGACTGTTTGATGGACAAATAA
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Synonyms
Publications