rna7404, rna7404 (mRNA) Nannochloropsis gaditana

Overview
Namerna7404
Unique Namerna7404
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length579
Alignment locationCM002471.1:498333..498650 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100158g5.7781.mrna
Orig protein idgnl|cribi|Naga_100158g5.7781
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:498333..498650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100158g5gene7163Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7404rna7404-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23285.1cds7387Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7404 ID=rna7404|Name=rna7404|organism=Nannochloropsis gaditana|type=mRNA|length=579bp
ATGATGAGTCGAGTCCGAGAGGTCGAGAAATTGAAACGTTCCATGCTTGT
TCGGGCCCGTCTCTTGCAATGGCGCCTCTTGTCGCGTCGTCGTCCGCCTG
CTCGATGGTTCGTGGGGGCCAACACTAGGGACAATGCAACTTCCGCAGGA
GGATCGCGGGTCTTGCCTGGCAATGCGGAGTCCGCGGCATTAATCGACAG
CTATTATCCTGTTTCCTCTCAAAATGGCGCAGCTTGCCACCACCGTCAAA
CAAAGATCCCCTTTTTTTTGCCTCCCCAACATCCGGCTTCTTATCTATCC
GAAATAGCTGTGGCTTGTCCTGAGCTTCTCGAGCAGATATTCCATTATGT
ACGCTCCCGTGAGCTTCGGGCCGTTACAGTTGTGGGTCGCCCATTTAAGT
ACGAGCTGGACTGCCAAGAGATTTGGCGGTCGCTCTATTTTCTCCGGTTC
GCCGCGGCATTTGGAAAATTCAAGAATTGGAAGAATTGTTACATCCTAAG
GGACGAGCGATGTGATCGAATACGGACATGGCGGAAATTTTTTGAAGCTT
CAAGAGTAAGGGCAGTGCCGGTGGTATAA
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protein sequence of rna7404

>rna7404-protein ID=rna7404-protein|Name=rna7404|organism=Nannochloropsis gaditana|type=polypeptide|length=105bp
MRVLVTWSIKHSLRLLSHAGPSCHKIYHAYEKNDIQEYKDRKIIFLKVLQ
ESPLCGAHFLQTDDTITTDVGEIDERYRMNRPNFDKSVGRVMYIYNTKSR
KLNKG
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mRNA from alignment at CM002471.1:498333..498650+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7404 ID=rna7404|Name=rna7404|organism=Nannochloropsis gaditana|type=mRNA|length=318bp|location=Sequence derived from alignment at CM002471.1:498333..498650+ (Nannochloropsis gaditana)
ATGAGGGTACTTGTCACATGGAGCATAAAACACAGCTTAAGACTACTTAG
CCATGCGGGCCCATCCTGTCACAAAATATACCATGCATATGAAAAAAATG
ATATTCAAGAATACAAAGATAGAAAAATAATCTTTTTGAAAGTGCTCCAG
GAATCGCCACTGTGCGGGGCTCACTTCTTACAAACTGATGACACGATTAC
AACCGACGTCGGAGAAATTGATGAGAGGTATCGGATGAATCGCCCTAATT
TTGACAAATCGGTCGGGCGTGTGATGTACATATACAATACGAAAAGTCGT
AAACTCAATAAAGGATGA
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Coding sequence (CDS) from alignment at CM002471.1:498333..498650+

>rna7404 ID=rna7404|Name=rna7404|organism=Nannochloropsis gaditana|type=CDS|length=318bp|location=Sequence derived from alignment at CM002471.1:498333..498650+ (Nannochloropsis gaditana)
ATGAGGGTACTTGTCACATGGAGCATAAAACACAGCTTAAGACTACTTAG
CCATGCGGGCCCATCCTGTCACAAAATATACCATGCATATGAAAAAAATG
ATATTCAAGAATACAAAGATAGAAAAATAATCTTTTTGAAAGTGCTCCAG
GAATCGCCACTGTGCGGGGCTCACTTCTTACAAACTGATGACACGATTAC
AACCGACGTCGGAGAAATTGATGAGAGGTATCGGATGAATCGCCCTAATT
TTGACAAATCGGTCGGGCGTGTGATGTACATATACAATACGAAAAGTCGT
AAACTCAATAAAGGATGA
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Synonyms
Publications