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Properties
| Property Name | Value |
|---|
| Product | myb dna binding protein transcription factor-like protein |
| Orig transcript id | gnl|cribi|Naga_100158g7.7779.mrna |
| Orig protein id | gnl|cribi|Naga_100158g7.7779 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:494742..498516 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7402 ID=rna7402|Name=rna7402|organism=Nannochloropsis gaditana|type=mRNA|length=1400bp
ATTCTATCCCATGTATTGTGGACGTGCAGGGGTTCAACGCCGTTCTTGTC
TCTGCTCTTCATTATGACACAGCTTTTTTTGCTCTTGCTTTCTTGCCTCT
TCAGGATATTCATGGCATTTTCTGGGACCACAAGACCTGCCCCTTCCTGC
GCTTTCACGACGGCCAAGGTGGCGACGCCGCTCCTGCTACTCGTGCATGC
TCTCTATATTATGTCCTCCCTTGGGGTCGGCGCCTTTGTCTTGCCCACAT
CCACCGGCATTTCCACCTCCAGAACACCTATGACGATTCAGCCCCGAGCC
CGGACAGACCTGGCTCACAAGCCTCGGAGCAACGTGGTGATGATGCCGGC
CTCCGAGCCCGCCGTGCCATATAAGGCACCAGGGACAGATTATCATAGGT
ATGTTGGCATTTATCAACGACTGTACTACGATCGCGTTCTGCTTTGCGGA
CAGTTCATCGACGATCGAGTGGCGAATCAGATCATGTCGATTCTCTGGTA
CCTGCACAACGAGGACAAGCACAAGCCTATTTACATGTACTTCAACGTGC
CAGGGGCCATGCTACGACCTGCTCTGAGCGTCTTCGACACAATGCAAGCG
ATGAGCAATGAGATAGAGACGATCAATATCGGTCTCACCACGGGCATGGG
CGGCTTTCTCTGCGCGGCCGGGACGCACGGGAGAAGGTTTGCCCTGCCGA
ACTCGAGATTTTTAATGCAGAAGACGGGCTTCGAGGAGGTGAGAGAGAAA
AAGAGGTGTTGAGGGCTTGCGGGCACTTTCTTGGGACGGTGATGGGTCAC
TGATGTACACTCTTCCTTCTCCCATCTTTCAGCAAGTGTACGGCCAGGCT
AGTGACATCATTTTGGAGGTGGAGAGCACCGTCAGGGAGAATCAACGTTT
TTTAAAGGAGCTCGCGCGCTTGACCGGGCGAGCCCCTGAGACTATCGTCG
ACGACTTTGCTCGCGACTTTTACCTGTCCGCAGAGGAGAGTGTGGAGTAC
GGCATGGTGGACCAGGTGATCATACCCGGACATAAGGACGCGTTGGCAGT
GACGGACGGAGAGGTGGGCTTCGGGCGCTTTGTGTCCGGGAGTGATCAAA
GGTACCAACCGCAATTCGCGCCGCAAGCGTGGAGCTAGGGTGAGAGAGAC
ACTGGGGCATCGCCGCTCGCGGGTCTTACCAAAAAGAAAAATAAGCACGA
TGTACTTAGCCAAGCGGCACGTGGCACATGTTGCACAGTTGGAGGGCTGT
AACTAACGGTTGAGTCTGCTTAAACCTTTGTCCACCGAGATACTCTGATC
CGCTCTTTCGCCTTTTGCTCACCAACGTCCAATCAGAGTGGTGACCATCT
TGAAGACGTCGAACAACCCGCTCCGTTTGTTCCCCTCCCCCCCTTCCACC back to topprotein sequence of rna7402 >rna7402-protein ID=rna7402-protein|Name=rna7402|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MNTQDTPISTSKPPLCAPSGTQTCAAEKDTEPSIVAVEEDAESLLLGWDA
VEGAVFYELQMLKQAVKSIGGEEDSQAEDWNAARAMEEPGLTDHGDAVGE
WCTLSASLKSNMVRKRNLSHSTPYRFRVRVRDKVDWLPFQTSSLLHTLST
FVQRMAAPRGEVGGAAGCVTLSWEPVEEAAAYAVHMREQGAVRWKEVGRV
GGTSVKKKNLEAGKAYHFRVRPVGERVEDVWVWSPWSEAMSPPSLPPVLR
RMFGSRLAVEVGKEGKKEIGVESLAGSVVGVYASAHWCAPCRQFTPQLAN
FYRGLQGAGKAFEIVFVSLDQEKEAFELYFESMPWLAIPWEGGEGEREAL
MRMYQITSVPRLLIFGRDGELLENNAVGSQFLREEAFHSWWEGRPFRAGG
GGCCGGGGCK back to topmRNA from alignment at CM002471.1:494742..498516- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7402 ID=rna7402|Name=rna7402|organism=Nannochloropsis gaditana|type=mRNA|length=3775bp|location=Sequence derived from alignment at CM002471.1:494742..498516- (Nannochloropsis gaditana)
TTTGTAAGAAGTGAGCCCCGCACAGTGGCGATTCCTGGAGCACTTTCAAA
AAGATTATTTTTCTATCTTTGTATTCTTGAATATCATTTTTTTCATATGC
ATGGTATATTTTGTGACAGGATGGGCCCGCATGGCTAAGTAGTCTTAAGC
TGTGTTTTATGCTCCATGTGACAAGTACCCTCATTCTCTTTTAAACCACC
TTGTCATGGACACGATGCACTTTGTTCTGATCACACCACCGAAATATCCA
GCCCTCCTGAAGGTGAACTCTAACCCTGAAGGTCAACTTTCATTCTCTTA
CATTTAACAATGACATCCCCTCGTGTGAAAATCAGCACCATAAGTGCCCT
CTTATGTATAAAAATTCATCGCCTTCTATCTCCCCTCGTTCTTTTCGACA
TAGCTACTGTTATACCACCGGCACTGCCCTTACTCTTGAAGCTTCAAAAA
ATTTCCGCCATGTCCGTATTCGATCACATCGCTCGTCCCTTAGGATGTAA
CAATTCTTCCAATTCTTGAATTTTCCAAATGCCGCGGCGAACCGGAGAAA
ATAGAGCGACCGCCAAATCTCTTGGCAGTCCAGCTCGTACTTAAATGGGC
GACCCACAACTGTAACGGCCCGAAGCTCACGGGAGCGTACATAATGGAAT
ATCTGGTCGTGAAGGTCATAGGAAGAGGAGGAGGTAAAAAAAGGGATGAG
AATGAATATTCTACCCCAGAAATAATAGGAAAGCAGCATAAGATTTATCA
AGGGCCATTTTTCAGTGTTTACATATAAGCAGCAATGTCAGGTGAGTTGT
CTTCCTGTCAAAATCGGTCTCTCCCATTAATGCCTGAGCATCACCCCTTT
ACGCCCCTGCACCTGCTCGAGAAGCTCAGGACAAGCCACAGCTATTTCGG
ATAGATAAGAAGCCGGATGTTGGGGAGGCAAAAAAAAGGGGATCTTTGTT
TGACGGTGGTGGCAAGCTCTGTAGGATCGATGTTGGAATAGAAAAGACCA
ATCAACGAGACAGAACAGGAAGTAAAAAAGATAAACCTTTCTTCTGACTT
ACGCGCCATTTTGAGAGGAAACAGGATAATAGCTGTCGATTAATGCCGCG
GACTCCGCATTGCCAGGCAAGACCCGCGATCCTCCTGCGGAAGTTGCATT
GTCCCTAGTGTTGGCCCCCACGAACCATCGAGCAGGCGGACGACGACGCG
ACAAGAGGCGCCATTGCAAGAGACGGGCCCGAACAAGCATGGAACGTTTC
AATTTCTCGACCTCTCGGACTCGACTCATCATGATATGGAGGATTTCTAT
GTTTCCGCAGCCGAAATATAGATTTTTACACTGCCCTGCTTCTCGTTCTG
TCTCGTGCTCTATCTGTCCTCCAGATCAAGACCCCCGCACTGGCAACCCA
ACAGGGTACCTGTGATGTATGTATTCTTAAAGTGAGTGGTGTCATGGAAT
TGATCATGTCGCTGTACAGTTTGGAAGGGGGGTTGTCATGCCCCTGTGGC
ACGACTTGGGATAGTTACAACTGGCAAATGCCAACTCCAGCCGCCCTGTC
TCTCGAGTAATTTGATGCAGCGAACAGAACGGGAAATGAATATATACAAG
CCAACGTCCCATGTTGACCATCTCTAGCTCTTGCTTAACACATATTGAGA
ACAGAATGTTCTGGCCAATGCCGGACAAGGATACTTGGAGTGACACGCAC
CCCCCGCATCGGAGTTGAACCCTTGACTCAAAGCAGTGGGGGTAATACCG
TTTTCGAATAGTTTTCCTGCAGGCTGCGACGTCTTCAAAGGTCTTGTGTG
CAAGTCTTGAGCAAAGTAATTTCCTTTATTTTGTTAACCTGTGCCGGGAC
GTGTCAATTCCCGATTCCCCTTATACTCGCAGACGCGGCGAATCGCTTTC
TGTACAAGAACACAGGAACCCGTCTCCCATGAATACCCAGGACACGCCGA
TATCGACTTCAAAGCCGCCACTTTGCGCTCCTTCTGGTACACAGACATGT
GCCGCGGAAAAAGATACCGAGCCAAGTATTGTGGCTGTGGAAGAGGACGC
AGAGTCTCTTCTGTTGGGGTGGGATGCAGTAGAAGGGGCGGTGTTCTACG
AGCTTCAGATGCTGAAGCAGGCAGTCAAGTCTATAGGGTACGTGACGGCA
CTATCTCTTGGAAAAATGGGTGTGTCACGGGTCGTTTCCCCCATATATGT
TGAAGGCCTGCGTCTAATTTTAGATTCTCTCGGAATGACAGAGGCGAAGA
GGATAGTCAGGCCGAAGACTGGAATGCTGCCAGGGCCATGGAAGAGCCTG
GACTTACGGATCATGGTGACGCTGTGGGAGAATGGTGCACGCTTTCCGCA
TCCCGTAAGTCTTTGTCCACCCTCTCACCCTCTTTCGCTCCTTTCCTCTC
TCCCTTCACGTCTCCTTTCTTGCGGGTCGTTCTCGTCCCTCTTTTTACCG
ATCAATTTCACACCTGCTCTCTTTCCTGCGCCTTTCCATGGATGCCTCAC
GTCCTTTCCCAAAACTCAAACTCCTCGCCGCACAGTGAAGAGCAACATGG
TCCGAAAGAGAAACCTCTCTCACTCCACCCCTTACCGCTTCCGCGTCCGC
GTCCGCGACAAAGTGGATTGGCTGCCGTTCCAGACTTCCTCCCTCCTCCA
CACTCTCTCCACGTTTGTGCAACGAATGGCGGCCCCGCGGGGAGAGGTGG
GCGGGGCAGCAGGGTGTGTCACCCTGTCCTGGGAGCCTGTGGAGGAGGCA
GCGGCCTACGCCGTCCACATGCGCGAGCAGGGGGCAGTCAGATGGAAGGA
GGTGGGGAGGGTAGGCGGCACGAGCGTGAAGAAGAAGAATCTGGAGGCAG
GAAAAGCCTACCACTTCCGAGTCAGGCCGGTGGGGGAGAGAGTGGAAGAC
GTCTGGGTGTGGAGCCCGTGGAGTGAGGCCATGAGTCCTCCCTCGCTTCC
ACCCGTCCTTCGGCGCATGTTTGGTTCGCGCCTGGCGGTAGAAGTGGGGA
AAGAGGGAAAAAAGGAGATTGGGGTGGAGTCACTGGCGGGTAGTGTTGTG
GGTGTGTACGCCTCGGCCCATTGGTGTGCTCCTTGCCGTCAGTTTACTCC
GCAATTGGCCAATTTTTACCGCGGCCTGCAAGGCGCTGGGAAAGCTTTTG
AGATTGTTTTTGTTTCGCTAGACCAGGAAAAAGAAGCTTTCGAATTATAC
TTCGAAAGCATGCCTTGGCTGGCAATTCCGTGGGAGGGAGGGGAGGGAGA
GAGGGAGGCATTGATGCGTATGTATCAGATAACATCCGTTCCGCGATTGT
TGATATTTGGGAGGGATGGAGAATTGCTGGAGAACAATGCGGTAGGGTCA
CAATTTTTGAGAGAAGAGGCATTTCATTCTTGGTGGGAGGGGAGACCGTT
CAGAGCAGGGGGAGGTGGATGTTGTGGAGGTGGAGGATGCAAGTAGAAGA
AGCGGGCGGTAGGGGAGGTGATTTCTGGAGGTAGACGCAATGCCTCCTAG
ACATGTTGACCCATATGTTTGCCTCTACAGAATAGGGTGTTGAGTTAAAG
CATTCGATGAACAAACTAGATAGATCGTACTTGATTCGCTGCCTGTTCGT
CTCAAGAGAAGAGTTTACATGGGCCTCGGCCCCAATGCAGGGAAAGTAAA
ATACCAGTGGTCGCACAAAAATGTGCCCCAAACACTTCCCAAGAATGTTT
TGCGTCGGGACGTTAGGACATTTTAGCTAAATCGCATGCACGTGCGGGGT
GCTACCAACCATGCTGTCTCCTCAT back to topCoding sequence (CDS) from alignment at CM002471.1:494742..498516- >rna7402 ID=rna7402|Name=rna7402|organism=Nannochloropsis gaditana|type=CDS|length=3699bp|location=Sequence derived from alignment at CM002471.1:494742..498516- (Nannochloropsis gaditana)
TGAAGAGCAACATGGTCCGAAAGAGAAACCTCTCTCACTCCACCCCTTAC
CGCTTCCGCGTCCGCGTCCGCGACAAAGTGGATTGGCTGCCGTTCCAGAC
TTCCTCCCTCCTCCACACTCTCTCCACGTTTGTGCAACGAATGGCGGCCC
CGCGGGGAGAGGTGGGCGGGGCAGCAGGGTGTGTCACCCTGTCCTGGGAG
CCTGTGGAGGAGGCAGCGGCCTACGCCGTCCACATGCGCGAGCAGGGGGC
AGTCAGATGGAAGGAGGTGGGGAGGGTAGGCGGCACGAGCGTGAAGAAGA
AGAATCTGGAGGCAGGAAAAGCCTACCACTTCCGAGTCAGGCCGGTGGGG
GAGAGAGTGGAAGACGTCTGGGTGTGGAGCCCGTGGAGTGAGGCCATGAG
TCCTCCCTCGCTTCCACCCGTCCTTCGGCGCATGTTTGGTTCGCGCCTGG
CGGTAGAAGTGGGGAAAGAGGGAAAAAAGGAGATTGGGGTGGAGTCACTG
GCGGGTAGTGTTGTGGGTGTGTACGCCTCGGCCCATTGGTGTGCTCCTTG
CCGTCAGTTTACTCCGCAATTGGCCAATTTTTACCGCGGCCTGCAAGGCG
CTGGGAAAGCTTTTGAGATTGTTTTTGTTTCGCTAGACCAGGAAAAAGAA
GCTTTCGAATTATACTTCGAAAGCATGCCTTGGCTGGCAATTCCGTGGGA
GGGAGGGGAGGGAGAGAGGGAGGCATTGATGCGTATGTATCAGATAACAT
CCGTTCCGCGATTGTTGATATTTGGGAGGGATGGAGAATTGCTGGAGAAC
AATGCGGTAGGGTCACAATTTTTGAGAGAAGAGGCATTTCATTCTTGGTG
GGAGGGGAGACCGTTCAGAGCAGGGGGAGGTGGATGTTGTGGAGGTGGAG
GATGCAAGTAGAGGCGAAGAGGATAGTCAGGCCGAAGACTGGAATGCTGC
CAGGGCCATGGAAGAGCCTGGACTTACGGATCATGGTGACGCTGTGGGAG
AATGGTGCACGCTTTCCGCATCCCATGAATACCCAGGACACGCCGATATC
GACTTCAAAGCCGCCACTTTGCGCTCCTTCTGGTACACAGACATGTGCCG
CGGAAAAAGATACCGAGCCAAGTATTGTGGCTGTGGAAGAGGACGCAGAG
TCTCTTCTGTTGGGGTGGGATGCAGTAGAAGGGGCGGTGTTCTACGAGCT
TCAGATGCTGAAGCAGGCAGTCAAGTCTATAGGTGAAGAGCAACATGGTC
CGAAAGAGAAACCTCTCTCACTCCACCCCTTACCGCTTCCGCGTCCGCGT
CCGCGACAAAGTGGATTGGCTGCCGTTCCAGACTTCCTCCCTCCTCCACA
CTCTCTCCACGTTTGTGCAACGAATGGCGGCCCCGCGGGGAGAGGTGGGC
GGGGCAGCAGGGTGTGTCACCCTGTCCTGGGAGCCTGTGGAGGAGGCAGC
GGCCTACGCCGTCCACATGCGCGAGCAGGGGGCAGTCAGATGGAAGGAGG
TGGGGAGGGTAGGCGGCACGAGCGTGAAGAAGAAGAATCTGGAGGCAGGA
AAAGCCTACCACTTCCGAGTCAGGCCGGTGGGGGAGAGAGTGGAAGACGT
CTGGGTGTGGAGCCCGTGGAGTGAGGCCATGAGTCCTCCCTCGCTTCCAC
CCGTCCTTCGGCGCATGTTTGGTTCGCGCCTGGCGGTAGAAGTGGGGAAA
GAGGGAAAAAAGGAGATTGGGGTGGAGTCACTGGCGGGTAGTGTTGTGGG
TGTGTACGCCTCGGCCCATTGGTGTGCTCCTTGCCGTCAGTTTACTCCGC
AATTGGCCAATTTTTACCGCGGCCTGCAAGGCGCTGGGAAAGCTTTTGAG
ATTGTTTTTGTTTCGCTAGACCAGGAAAAAGAAGCTTTCGAATTATACTT
CGAAAGCATGCCTTGGCTGGCAATTCCGTGGGAGGGAGGGGAGGGAGAGA
GGGAGGCATTGATGCGTATGTATCAGATAACATCCGTTCCGCGATTGTTG
ATATTTGGGAGGGATGGAGAATTGCTGGAGAACAATGCGGTAGGGTCACA
ATTTTTGAGAGAAGAGGCATTTCATTCTTGGTGGGAGGGGAGACCGTTCA
GAGCAGGGGGAGGTGGATGTTGTGGAGGTGGAGGATGCAAGTAGAGGCGA
AGAGGATAGTCAGGCCGAAGACTGGAATGCTGCCAGGGCCATGGAAGAGC
CTGGACTTACGGATCATGGTGACGCTGTGGGAGAATGGTGCACGCTTTCC
GCATCCCATGAATACCCAGGACACGCCGATATCGACTTCAAAGCCGCCAC
TTTGCGCTCCTTCTGGTACACAGACATGTGCCGCGGAAAAAGATACCGAG
CCAAGTATTGTGGCTGTGGAAGAGGACGCAGAGTCTCTTCTGTTGGGGTG
GGATGCAGTAGAAGGGGCGGTGTTCTACGAGCTTCAGATGCTGAAGCAGG
CAGTCAAGTCTATAGGTGAAGAGCAACATGGTCCGAAAGAGAAACCTCTC
TCACTCCACCCCTTACCGCTTCCGCGTCCGCGTCCGCGACAAAGTGGATT
GGCTGCCGTTCCAGACTTCCTCCCTCCTCCACACTCTCTCCACGTTTGTG
CAACGAATGGCGGCCCCGCGGGGAGAGGTGGGCGGGGCAGCAGGGTGTGT
CACCCTGTCCTGGGAGCCTGTGGAGGAGGCAGCGGCCTACGCCGTCCACA
TGCGCGAGCAGGGGGCAGTCAGATGGAAGGAGGTGGGGAGGGTAGGCGGC
ACGAGCGTGAAGAAGAAGAATCTGGAGGCAGGAAAAGCCTACCACTTCCG
AGTCAGGCCGGTGGGGGAGAGAGTGGAAGACGTCTGGGTGTGGAGCCCGT
GGAGTGAGGCCATGAGTCCTCCCTCGCTTCCACCCGTCCTTCGGCGCATG
TTTGGTTCGCGCCTGGCGGTAGAAGTGGGGAAAGAGGGAAAAAAGGAGAT
TGGGGTGGAGTCACTGGCGGGTAGTGTTGTGGGTGTGTACGCCTCGGCCC
ATTGGTGTGCTCCTTGCCGTCAGTTTACTCCGCAATTGGCCAATTTTTAC
CGCGGCCTGCAAGGCGCTGGGAAAGCTTTTGAGATTGTTTTTGTTTCGCT
AGACCAGGAAAAAGAAGCTTTCGAATTATACTTCGAAAGCATGCCTTGGC
TGGCAATTCCGTGGGAGGGAGGGGAGGGAGAGAGGGAGGCATTGATGCGT
ATGTATCAGATAACATCCGTTCCGCGATTGTTGATATTTGGGAGGGATGG
AGAATTGCTGGAGAACAATGCGGTAGGGTCACAATTTTTGAGAGAAGAGG
CATTTCATTCTTGGTGGGAGGGGAGACCGTTCAGAGCAGGGGGAGGTGGA
TGTTGTGGAGGTGGAGGATGCAAGTAGAGGCGAAGAGGATAGTCAGGCCG
AAGACTGGAATGCTGCCAGGGCCATGGAAGAGCCTGGACTTACGGATCAT
GGTGACGCTGTGGGAGAATGGTGCACGCTTTCCGCATCCCATGAATACCC
AGGACACGCCGATATCGACTTCAAAGCCGCCACTTTGCGCTCCTTCTGGT
ACACAGACATGTGCCGCGGAAAAAGATACCGAGCCAAGTATTGTGGCTGT
GGAAGAGGACGCAGAGTCTCTTCTGTTGGGGTGGGATGCAGTAGAAGGGG
CGGTGTTCTACGAGCTTCAGATGCTGAAGCAGGCAGTCAAGTCTATAGG back to top
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