rna740, rna740 (mRNA) Nannochloropsis gaditana

Overview
Namerna740
Unique Namerna740
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1916
Alignment locationCM002456.1:296506..297153 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100351g3.7474.mrna
Orig protein idgnl|cribi|Naga_100351g3.7474
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:296506..297153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100351g3gene709Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29933.1cds740Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna740rna740-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna740 ID=rna740|Name=rna740|organism=Nannochloropsis gaditana|type=mRNA|length=1916bp
CGCACAGCTTGCCTTTCTTGGGCCTTCGCTTGTAGCAGTCTTGGCGAAGG
GAGGCAGCTTTCCTCGTTTCCGCCTCCGCGCCGCGATCGTAACAAGTACC
GAAGAAAATGACTGCAGGTACGGATAGCCCCCCTCATGTAAATTTTCACG
GGTTAAATTGAGCCAGTCAAATTTCATTTAGTGTCCCCGACACTGCAATG
TCGTTTCTCCTTTTTCGCGCGTCCTTTCTTTCCCGCTCATCGTTTTCCAA
CCGTCCCATCCACCTCAATGCAAAAAACACACTCTGCACTTCGACTTGTG
GACGTTTGTCAGCTGCGGGAAACAGAGAAAATATGGAGATCGCGCCTTCC
AACACGAATAAAGTATCAGTAGCAGCGGCCGCCATCAATGATCAAGAATT
CAGCCCTGAACTTTTGCGATTCTTCTACAACCGCCTCTTCCCTTATCAAC
CCATGTTTAAATGGCTTTCCTACGGAAATGATCCTGACAATGATGCTGCC
CATATCGTCCGGGATTACTTCGCCTGTCGTGAATTTTCCTTTACGATAAA
TGATGACATCTACATACGATATCAATCATTCCGGGATGCCTCCGAAATGG
AGTCAGCGATACAGAAGAAACAACCTCACAAAATAGACATAGGGGCCGTG
TTTACGCTGCCTCCCAAAGATCATCACACTGTTAAAGCAGAGGCCTTCAA
ACCCGTGGAACGCGAGCTCATTTTCGACATCGACATGACAGACTACGACG
ACATCCGAAGCTGTTGCACAGGGGCCAAAATTTGTCCCAAGTGCTGGGTC
TTCATGACCATGGCCGTGAAAGTCGTGGACACCGCCTTACGGGAGGATTT
CGGGTTTCGATATATTTTGTGGGTGTACTCCGGTCGGCGCGGCGTGCATT
GTTGGGTGTGCGATCCCAACGCCCGTGCCTTGTCGAACGATGGGCGTAGC
GCCGTGGTGGAATACTTGTCGTTGCCGCGGGGAAACGAGAAGAGCAAGGG
GAAGAACGGGGGGTTGTCCTGGCCCCTCCATCCGTCCTTTACGCGGGCTT
TTGACATCTTGGAGCCCATGTTCGAGTCAGGGGTCCTTGGGGAGGCAGGA
CAGGGGGTGTTGGACTCAGAGAATTCGTGGGACACCCTTTTGGACACGCT
CCCCGACGAAGACCTGGCCAACCGGCTTCGAAGGGAAATGCGACGCTTGA
CCAACGCGCAGGACCGATGGCTCGAGATCAAATCCCAGGTGCGCGCGGCA
AGTTCTGCCCATGCCAGTGGAAACGCCCGCCGGCAGAGTCGTGGTGGCCG
GGCAGGGAACGGTCTCTTCGCCCTCGACCTGTGGAAGTACGAGGTGGTTT
TCCAGTATTGCTACCCTCGGTTGGACGTGAACGTGTCGAAGGGCACCAAC
CACTTGCTCAAATCGCCCTTCGCGGTCCACCCGAAGACGGGACGTGTGTG
CGTGCCCATTGATCCCGAGGATGTGGACAATTTCGACCCATTTCGGGTCC
CCACGCTGAAGGCCTTGGCCGCGCAGATTGACGCCTACGATGCCCAGAAT
GCTCAAAATGCATCGGCCAAAGCACTGCCCGATTACAAAAAAACGGAGCT
GAAAAGCGCCGTGGAGCTGCTGGAGCGATGTGTGGTGGATCCTGTGGCCC
TGGCTACGAAGAGGCGATTGAAACTGGAGAGGGAGAAGGAGGCTGCCATG
ATCGGAGACTTCTAGTCTGGCCCGCCCATGAGAACGAAAGGACCGAGGGA
AGAGGAAAGGGAGGGGGGAGATGAGCATGCATGTGGGGATCAAATGATCA
TAACAATGGGTGCAAGCCCAAAAATTGAGTAAAGTGGGAAAGGCCGGGCT
TCACGTCGCCCACATTTGTACGAACGCTTCATAGAAAGTACTGAGAAACA
AATCAGAAAGAAAGGC
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protein sequence of rna740

>rna740-protein ID=rna740-protein|Name=rna740|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MVNQGSGAQSRKRPLSTNGKSGPTKAKLRKQDGVASNKGAIDAFLVPRPR
DGSKTSRPSSPVQCVSPTLSPIDGSTVPDNLNSIDNSSTRASQVSPDWLV
RRLNDGQGQADAQASWDARSKERLTATDVTLINKRRAMGCQSKKKSGWRV
QGDTKVFVAYTGAGVQVAEGAEAFRLSMAYGKKRGKRKKDGKDVNEKAAD
GSRGHKASQRGALER
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mRNA from alignment at CM002456.1:296506..297153-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna740 ID=rna740|Name=rna740|organism=Nannochloropsis gaditana|type=mRNA|length=648bp|location=Sequence derived from alignment at CM002456.1:296506..297153- (Nannochloropsis gaditana)
ATGGTCAATCAAGGAAGTGGAGCACAGAGTAGAAAGCGACCACTGTCCAC
TAATGGCAAGAGTGGTCCGACCAAAGCTAAGCTAAGAAAGCAGGATGGTG
TGGCTTCCAATAAGGGGGCAATTGACGCCTTCCTCGTTCCGCGTCCCCGT
GATGGTTCGAAAACATCGAGGCCGTCGAGTCCTGTACAGTGTGTATCACC
CACTCTTTCTCCCATTGACGGAAGCACCGTCCCTGATAATTTGAATTCAA
TCGATAATTCCTCCACAAGGGCTTCCCAAGTGTCCCCCGACTGGCTCGTG
CGACGCTTGAATGACGGGCAAGGCCAGGCCGACGCGCAGGCTTCTTGGGA
TGCGCGCAGCAAAGAGAGGCTCACTGCCACGGACGTGACATTGATCAATA
AACGCCGGGCCATGGGATGTCAAAGCAAAAAAAAGAGTGGATGGCGCGTT
CAAGGAGACACGAAAGTGTTCGTGGCGTACACAGGTGCTGGGGTGCAAGT
CGCGGAAGGGGCTGAGGCTTTCCGATTGAGTATGGCGTATGGAAAAAAGA
GGGGCAAAAGGAAGAAGGATGGAAAAGACGTGAATGAAAAAGCTGCAGAT
GGGAGCCGTGGTCACAAAGCTAGCCAGCGCGGCGCCTTGGAGAGGTAA
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Coding sequence (CDS) from alignment at CM002456.1:296506..297153-

>rna740 ID=rna740|Name=rna740|organism=Nannochloropsis gaditana|type=CDS|length=648bp|location=Sequence derived from alignment at CM002456.1:296506..297153- (Nannochloropsis gaditana)
ATGGTCAATCAAGGAAGTGGAGCACAGAGTAGAAAGCGACCACTGTCCAC
TAATGGCAAGAGTGGTCCGACCAAAGCTAAGCTAAGAAAGCAGGATGGTG
TGGCTTCCAATAAGGGGGCAATTGACGCCTTCCTCGTTCCGCGTCCCCGT
GATGGTTCGAAAACATCGAGGCCGTCGAGTCCTGTACAGTGTGTATCACC
CACTCTTTCTCCCATTGACGGAAGCACCGTCCCTGATAATTTGAATTCAA
TCGATAATTCCTCCACAAGGGCTTCCCAAGTGTCCCCCGACTGGCTCGTG
CGACGCTTGAATGACGGGCAAGGCCAGGCCGACGCGCAGGCTTCTTGGGA
TGCGCGCAGCAAAGAGAGGCTCACTGCCACGGACGTGACATTGATCAATA
AACGCCGGGCCATGGGATGTCAAAGCAAAAAAAAGAGTGGATGGCGCGTT
CAAGGAGACACGAAAGTGTTCGTGGCGTACACAGGTGCTGGGGTGCAAGT
CGCGGAAGGGGCTGAGGCTTTCCGATTGAGTATGGCGTATGGAAAAAAGA
GGGGCAAAAGGAAGAAGGATGGAAAAGACGTGAATGAAAAAGCTGCAGAT
GGGAGCCGTGGTCACAAAGCTAGCCAGCGCGGCGCCTTGGAGAGGTAA
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Synonyms
Publications