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Properties
| Property Name | Value |
|---|
| Product | protein notum |
| Orig transcript id | gnl|cribi|Naga_100053g40.5050.mrna |
| Orig protein id | gnl|cribi|Naga_100053g40.5050 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:466294..468710 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7388 ID=rna7388|Name=rna7388|organism=Nannochloropsis gaditana|type=mRNA|length=2012bp
AGTCCCTCTTCTTTCGTTGTCTATACCCATTTAGTACTCCCACCCTGCAA
GCTTCCAGTTGCGTTCGACCATCGCGTGGAAGCGATTTGGTTCTTTTGAT
TGATCGATTATTTTCTCGCATTGGCACAAATATTCATTTAATCCAGGATG
AAGCGTTCCCGCATGGATGGTCAGGTTAGCAAAGAGGCGTACTATGAAGC
GGAGTCTTCGTTCATCACCACCCTCCCTTACGGGCAGAGTGCTAATGGAG
AGCTTCCCGGAGGCCCCGTCGGTGAGGCTAGCCAGGCCTCATCTGCCGCT
TCTTTCCAACGGGCCACTCCATCGACCCTGGCTTCGCGGCGTTTCGTCAA
GCCCAAGAAACTAGATCGACGGAAAGAATATCTGGAGGCCGTCAAAGCCT
TAAACGGCCGCTTCCAGGCCTGGGTGGTCGACCAGGTGTCTCGGGACCCG
GGCGTAAGCCTGTGTGAGAACGCCCTCGAGTACCTGAGCTATGTGACGCA
GCTGGATGGACGCTACCTGCGCAAACAAGGCGAAGTTTTTACGTTCGGCT
CCAGCGAGTGTGGGCAGTGCGCCCACGGGGACCGGTCTGCCTCCGACATC
CTGGTCGTCGCCCCCCGCGTCGTGTACGCCCTGCGCGGCAAGAACGTGTG
CAACATCGCCTGCGGGGCCCTCCACAACGTGGCCACCACCTCGGACGGGC
GTGTCTACACCTGGGGGTGCAACGACGACGGGGCCCTGGGCCGGGGGGGA
CACGAGGCGGAGCCCCATCTGGTGTCGGACGTGCGGCATGAGACCGTGAT
CGGAGTGGCGGCGGGGGACAGCCACTCGCTGGTCCTGACAGTGGAGGGCA
GCGTCTACGGGTGGGGGTGCTACAAGGACAAGGAGGGGAAGATGTTCTTC
AACAGCGCCTCCTCGGAGCGCGAGATCCTTCGGAAGCAGACGGGGCCCAT
GCGGCTCCCGGGGCTGGAGCACGTCCGGGAGATCCGAGCCGGCGCATCCA
CCAACCTGGCGCTCTTGGCGGACTCGACGGTGGTCTCCTGGGGCATCGGG
GAGAGCGGGGAGCTGGGCCGGGCGATCACGCTCGAGCTCCGGGCGGAGGA
GGCGGAGGAGGACGGGGGAAAGGCGGAGTATGAGCTCTACCGGGTCTGGA
AGGAGCATTTGACACCGCGGCCCATGCAGCTGGCGGGGGGTCGGCTGGCC
ACGGGCGTGAAGGCGATCGGCGCCGGGTACAACCACAGCATGGTGGTGAT
GGCCGTGCGCGCGGAGGTGTGGGCGGCGGGCTTGAACAACTACGGTCAGC
TCGGGCTGGGCCACCGGGAGAATCGTTATTTGCTGGAGCACGTGGAGGGG
TTAGACGGGCGGGGTATCACGGAGGTGACGGGGGGGGCGCACCACTCTAT
GGCCCTGGCAGGGCCCACAGGGAAGCTCTTTGCCTTCGGGCGCTCCGATT
CCTCCCAGCTGGGCATCGGCCGGGCGGGCGGGGTGCTGGCGCCGGGAGCC
TCGGAGGCTCTGCCCGTTCCTGTCCTCTTCCCGGCGCGGGAGGCGGGCAC
GGGCAAGCCGCCCTTCGTGACGGGCGTGTCCTGTGGAGGCACCTTCAACT
TGGCCACCACCAGCAGCAACCAGGTCTACTCCTGGGGCTTCGGGGAGATG
GGCCAGCTCGGGCACCGGCCCGCCAGGGGGGAGGAGACCTCAGACGAGCC
CTGCCCGCGCTTGGTGGACATGTCGCAGGCTAGGGGGGGGGGCGATGGGG
GGGGGGCGAGGGGTTTCGAGGTCTTGAAGGTGGACGGAGGGGCGCAGCAC
AGCGTGATCCTGGCCAAGGTGCCGGCGACCTTTATGGACACAGCCAGACG
CAAGCTGGAAGAGGCGGAGGCCAAATATGAACGGCGGCAGGAGGAAAGAC
GCCGAGCGGCATCGGAGAAAGGGAGGGGGGGGGAGGAGGAGGAGGAGTTG
GATATGGATGAGTTGTGAGCTGCACGGAAAAGCAATGTGGGTGAAACATG
AGGCCAGAGGCG back to topprotein sequence of rna7388 >rna7388-protein ID=rna7388-protein|Name=rna7388|organism=Nannochloropsis gaditana|type=polypeptide|length=543bp
MGLRTAAINAYVCYSDVVEVRHPPQPRPLRPYFLLFLLVANILAVEGQQQ
VFNISRPSGTGILEYFPLEGENKDDGGGVCLDGSPAGYYYRPGQGPGANK
FLLYYEGGGWCTSDRDCHLRAQTPLGSSKEWLPYMEASTCLGSYFLNTSS
NPLHDWNILFMKYCDGSSFSSMLLQAVSVTTQFLNASSGEALTAHVYYRG
QRIHDALLDTFVRRHGLLEASDVVVAGCSAGGLSVYLHVDEVAARFTGRA
GARVRGLADSGFFVDTAPPSALGNHGNEKDGGARCEGGQSGGETLRWLAS
RQFAPALSPEAVGCLAAGGSGPQGEDAVETVLGAGKVPGQGRRYMHAGPS
TRLRTLEALFPAQSLVRHTAPPSPPSLFPPPPGDTEAEVRARCLFARHLL
PSLRTPVFSFFSRYDGAQTSSFACLTDPEGQAEAVNAASRAFVRAFRESL
AASAVPHGYFIDACFRHCFWELVPAPPSFPLEGSTVGALPMSSSVINPWT
SLKAPSGRSAAEIFLAWYEGRGGLDDWREERTEAFPCLSCCRG back to topmRNA from alignment at CM002471.1:466294..468710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7388 ID=rna7388|Name=rna7388|organism=Nannochloropsis gaditana|type=mRNA|length=2417bp|location=Sequence derived from alignment at CM002471.1:466294..468710- (Nannochloropsis gaditana)
AAAGTCACACCCACTGACCGCATGCTCACCATGCACACACCTTATTTTGA
ACAGGATCCATCGCCATCCTAGAAGGTGGACGTTTTGTCGAGCCCATGGC
AAATTTCCGTAAAGAACATTGTCGTCTTGCTGCTGGAGGCTGATACCGAA
CGTGGAACAATTCCCTTTTCCGGAGTGAGGTTCCCCTTGTTCTCCTCCCT
GTTTCAGTCAATTTCATCTTTCCAGCTCCTGTTACATTGAAAAGACTAGC
TTCATTGAGGAAACAGCAATTATCCCGTTTTTGGTTCTCGATCATGGGCC
TGAGGACCGCAGCTATTAACGCATACGTCTGCTACTCCGACGTTGTCGAA
GTGCGCCATCCGCCCCAGCCGAGGCCCCTCCGTCCTTATTTCCTTCTTTT
CCTTCTTGTGGCCAATATCCTTGCTGTTGAGGGACAACAGCAAGTGTTTA
ATATCTCCCGCCCCTCTGGTACCGGCATATTGGAATATTTTCCATTGGAG
GGCGAGAACAAGGACGATGGCGGCGGCGTGTGCCTGGACGGGTCACCGGC
AGGCTATTACTATCGTCCGGGTCAGGGTCCCGGCGCCAACAAGTTCTTGC
TCTATTATGAAGGTGGCGGATGGTGTACCAGTGGTAGGTCAAGTGTGCGG
GTCGAAGTTTGTCGTCCCTCTACGTCAATCGTTCGTTTTCTCGCAGCGCC
CGATTACGAGCTTTTCTTGACTGATCTTTTCCCATATCCGTGCCCATCAT
GTGAGGCGTGCCCAAAATTGGCCAATCATAACGATAAAAACTCTTCCCTT
TTCCCCTGCGACAGACCGGGACTGCCACCTGCGCGCCCAAACCCCCTTGG
GCAGCAGCAAGGAGTGGCTGCCCTACATGGAGGCTTCGACCTGCCTGGGC
TCCTACTTCCTGAACACGAGCAGCAACCCCTTGCACGACTGGAACATCCT
CTTCATGAAGTACTGCGACGGTTCTTCCTTCTCCAGCATGCTCCTCCAGG
CTGTTTCGGTCACTACGCAATTCCTGAATGCCAGTTCCGGAGAAGCCCTG
ACGGCCCATGTCTACTACCGGGGCCAGCGCATCCACGACGCCCTCCTCGA
CACCTTTGTCCGCCGGCACGGCCTGCTCGAGGCCTCGGACGTTGTGGTTG
CGGGCTGTTCCGCGGGGGGCCTGTCCGTCTACCTGCACGTGGACGAGGTA
GCGGCCCGCTTCACGGGGCGGGCGGGGGCGCGCGTTCGGGGCCTGGCGGA
TTCCGGTTTCTTCGTGGACACCGCCCCGCCCTCGGCACTGGGAAATCATG
GCAACGAGAAGGATGGGGGCGCAAGGTGCGAGGGCGGGCAGAGCGGCGGT
GAGACGCTGCGGTGGCTGGCGAGCAGGCAGTTTGCCCCCGCGCTGAGCCC
AGAGGCCGTGGGCTGCCTGGCCGCGGGGGGGTCGGGGCCACAGGGTGAGG
ACGCTGTCGAGACGGTGTTGGGCGCGGGGAAGGTCCCAGGACAGGGGCGG
CGTTACATGCATGCGGGGCCCTCGACGCGCCTGAGGACCCTGGAGGCGCT
CTTCCCCGCTCAATCCCTCGTCCGACATACCGCCCCTCCCTCCCCCCCGT
CCCTTTTCCCTCCCCCGCCTGGGGACACAGAGGCCGAGGTCCGAGCTCGC
TGTCTCTTTGCACGCCACCTGCTTCCCTCCCTCCGCACCCCGGTCTTCTC
CTTCTTCAGCCGCTACGACGGCGCCCAGACCTCGAGCTTCGCCTGCCTAA
CCGACCCGGAGGGGCAGGCGGAGGCTGTGAATGCGGCCTCCCGGGCCTTC
GTGCGCGCTTTCCGCGAGAGCCTGGCCGCCTCCGCCGTCCCCCACGGCTA
CTTCATCGACGCCTGCTTTCGGCACTGCTTCTGGGAGCTGGTGCCCGCGC
CCCCCTCGTTTCCGTTGGAAGGGTCGACCGTGGGGGCGCTGCCCATGTCC
TCGAGTGTGATCAACCCCTGGACCTCCCTCAAGGCGCCCTCGGGCAGGTC
CGCGGCCGAGATCTTCCTGGCCTGGTATGAGGGTCGAGGGGGGCTGGACG
ACTGGCGCGAGGAGAGGACGGAGGCCTTTCCCTGCCTGAGCTGTTGTCGG
GGCTGAGGGTGCGCGTCGGGGAGCGGTTCCACATGGCGGGGGATGGAGAC
GGGGGAGGGTGTGAAGGGATGAGGGGTAAGACAAAAAGGTCTGTGATTGA
CTACGGGCCCGCCAGAAGAAAGGGGGTTGGGCATGGAACAAGACGGGAGG
AGAGCTCGCGTCGCGAGTCCTGGCCGCGGGTTGTATTAAAGGGCTAATAA
GAATGTGTGACAGGGAAGCAGGTGTGTGAGTGCCCCCCGCCCACACCAAA
TGTAAGGCAGCGTGTGTCGAGAGAAATCCAGCAAAGCTCCAAAACCAAAC
TCAGGAGCCACGCGCCT back to topCoding sequence (CDS) from alignment at CM002471.1:466294..468710- >rna7388 ID=rna7388|Name=rna7388|organism=Nannochloropsis gaditana|type=CDS|length=3264bp|location=Sequence derived from alignment at CM002471.1:466294..468710- (Nannochloropsis gaditana)
ACCGGGACTGCCACCTGCGCGCCCAAACCCCCTTGGGCAGCAGCAAGGAG
TGGCTGCCCTACATGGAGGCTTCGACCTGCCTGGGCTCCTACTTCCTGAA
CACGAGCAGCAACCCCTTGCACGACTGGAACATCCTCTTCATGAAGTACT
GCGACGGTTCTTCCTTCTCCAGCATGCTCCTCCAGGCTGTTTCGGTCACT
ACGCAATTCCTGAATGCCAGTTCCGGAGAAGCCCTGACGGCCCATGTCTA
CTACCGGGGCCAGCGCATCCACGACGCCCTCCTCGACACCTTTGTCCGCC
GGCACGGCCTGCTCGAGGCCTCGGACGTTGTGGTTGCGGGCTGTTCCGCG
GGGGGCCTGTCCGTCTACCTGCACGTGGACGAGGTAGCGGCCCGCTTCAC
GGGGCGGGCGGGGGCGCGCGTTCGGGGCCTGGCGGATTCCGGTTTCTTCG
TGGACACCGCCCCGCCCTCGGCACTGGGAAATCATGGCAACGAGAAGGAT
GGGGGCGCAAGGTGCGAGGGCGGGCAGAGCGGCGGTGAGACGCTGCGGTG
GCTGGCGAGCAGGCAGTTTGCCCCCGCGCTGAGCCCAGAGGCCGTGGGCT
GCCTGGCCGCGGGGGGGTCGGGGCCACAGGGTGAGGACGCTGTCGAGACG
GTGTTGGGCGCGGGGAAGGTCCCAGGACAGGGGCGGCGTTACATGCATGC
GGGGCCCTCGACGCGCCTGAGGACCCTGGAGGCGCTCTTCCCCGCTCAAT
CCCTCGTCCGACATACCGCCCCTCCCTCCCCCCCGTCCCTTTTCCCTCCC
CCGCCTGGGGACACAGAGGCCGAGGTCCGAGCTCGCTGTCTCTTTGCACG
CCACCTGCTTCCCTCCCTCCGCACCCCGGTCTTCTCCTTCTTCAGCCGCT
ACGACGGCGCCCAGACCTCGAGCTTCGCCTGCCTAACCGACCCGGAGGGG
CAGGCGGAGGCTGTGAATGCGGCCTCCCGGGCCTTCGTGCGCGCTTTCCG
CGAGAGCCTGGCCGCCTCCGCCGTCCCCCACGGCTACTTCATCGACGCCT
GCTTTCGGCACTGCTTCTGGGAGCTGGTGCCCGCGCCCCCCTCGTTTCCG
TTGGAAGGGTCGACCGTGGGGGCGCTGCCCATGTCCTCGAGTGTGATCAA
CCCCTGGACCTCCCTCAAGGCGCCCTCGGGCAGGTCCGCGGCCGAGATCT
TCCTGGCCTGGTATGAGGGTCGAGGGGGGCTGGACGACTGGCGCGAGGAG
AGGACGGAGGCCTTTCCCTGCCTGAGCTGTTGTCGGGGCTGAATGGGCCT
GAGGACCGCAGCTATTAACGCATACGTCTGCTACTCCGACGTTGTCGAAG
TGCGCCATCCGCCCCAGCCGAGGCCCCTCCGTCCTTATTTCCTTCTTTTC
CTTCTTGTGGCCAATATCCTTGCTGTTGAGGGACAACAGCAAGTGTTTAA
TATCTCCCGCCCCTCTGGTACCGGCATATTGGAATATTTTCCATTGGAGG
GCGAGAACAAGGACGATGGCGGCGGCGTGTGCCTGGACGGGTCACCGGCA
GGCTATTACTATCGTCCGGGTCAGGGTCCCGGCGCCAACAAGTTCTTGCT
CTATTATGAAGGTGGCGGATGGTGTACCAGTGACCGGGACTGCCACCTGC
GCGCCCAAACCCCCTTGGGCAGCAGCAAGGAGTGGCTGCCCTACATGGAG
GCTTCGACCTGCCTGGGCTCCTACTTCCTGAACACGAGCAGCAACCCCTT
GCACGACTGGAACATCCTCTTCATGAAGTACTGCGACGGTTCTTCCTTCT
CCAGCATGCTCCTCCAGGCTGTTTCGGTCACTACGCAATTCCTGAATGCC
AGTTCCGGAGAAGCCCTGACGGCCCATGTCTACTACCGGGGCCAGCGCAT
CCACGACGCCCTCCTCGACACCTTTGTCCGCCGGCACGGCCTGCTCGAGG
CCTCGGACGTTGTGGTTGCGGGCTGTTCCGCGGGGGGCCTGTCCGTCTAC
CTGCACGTGGACGAGGTAGCGGCCCGCTTCACGGGGCGGGCGGGGGCGCG
CGTTCGGGGCCTGGCGGATTCCGGTTTCTTCGTGGACACCGCCCCGCCCT
CGGCACTGGGAAATCATGGCAACGAGAAGGATGGGGGCGCAAGGTGCGAG
GGCGGGCAGAGCGGCGGTGAGACGCTGCGGTGGCTGGCGAGCAGGCAGTT
TGCCCCCGCGCTGAGCCCAGAGGCCGTGGGCTGCCTGGCCGCGGGGGGGT
CGGGGCCACAGGGTGAGGACGCTGTCGAGACGGTGTTGGGCGCGGGGAAG
GTCCCAGGACAGGGGCGGCGTTACATGCATGCGGGGCCCTCGACGCGCCT
GAGGACCCTGGAGGCGCTCTTCCCCGCTCAATCCCTCGTCCGACATACCG
CCCCTCCCTCCCCCCCGTCCCTTTTCCCTCCCCCGCCTGGGGACACAGAG
GCCGAGGTCCGAGCTCGCTGTCTCTTTGCACGCCACCTGCTTCCCTCCCT
CCGCACCCCGGTCTTCTCCTTCTTCAGCCGCTACGACGGCGCCCAGACCT
CGAGCTTCGCCTGCCTAACCGACCCGGAGGGGCAGGCGGAGGCTGTGAAT
GCGGCCTCCCGGGCCTTCGTGCGCGCTTTCCGCGAGAGCCTGGCCGCCTC
CGCCGTCCCCCACGGCTACTTCATCGACGCCTGCTTTCGGCACTGCTTCT
GGGAGCTGGTGCCCGCGCCCCCCTCGTTTCCGTTGGAAGGGTCGACCGTG
GGGGCGCTGCCCATGTCCTCGAGTGTGATCAACCCCTGGACCTCCCTCAA
GGCGCCCTCGGGCAGGTCCGCGGCCGAGATCTTCCTGGCCTGGTATGAGG
GTCGAGGGGGGCTGGACGACTGGCGCGAGGAGAGGACGGAGGCCTTTCCC
TGCCTGAGCTGTTGTCGGGGCTGAATGGGCCTGAGGACCGCAGCTATTAA
CGCATACGTCTGCTACTCCGACGTTGTCGAAGTGCGCCATCCGCCCCAGC
CGAGGCCCCTCCGTCCTTATTTCCTTCTTTTCCTTCTTGTGGCCAATATC
CTTGCTGTTGAGGGACAACAGCAAGTGTTTAATATCTCCCGCCCCTCTGG
TACCGGCATATTGGAATATTTTCCATTGGAGGGCGAGAACAAGGACGATG
GCGGCGGCGTGTGCCTGGACGGGTCACCGGCAGGCTATTACTATCGTCCG
GGTCAGGGTCCCGGCGCCAACAAGTTCTTGCTCTATTATGAAGGTGGCGG
ATGGTGTACCAGTG back to top
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