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Properties
| Property Name | Value |
|---|
| Product | otu-like cysteine protease family protein |
| Orig transcript id | gnl|cribi|Naga_100053g31.5070.mrna |
| Orig protein id | gnl|cribi|Naga_100053g31.5070 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:449014..452206 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7378 ID=rna7378|Name=rna7378|organism=Nannochloropsis gaditana|type=mRNA|length=237bp
ATGGGCAGTGTGGATAGCTTGCAGAGGGGGAAGCGGGAGCCATGGAAGGG
AAGTGGGGGGATGTACTCGTCGGTTGGGATTGGAAGAGGGTCGTGGCGTG
TGAACAGGGGTCGGGAGGGGAGTGTGGACGGGCCTCGAGGCAGTCACCTT
ACTTTCGACTGGGATTGGTTATATACGAACTGGAGGGTGTGCATAGAATC
TAAGGAAGGTGGGGGCACAACCCATGCCAATAATTAA back to topprotein sequence of rna7378 >rna7378-protein ID=rna7378-protein|Name=rna7378|organism=Nannochloropsis gaditana|type=polypeptide|length=693bp
MGFDFIKMSGSLFRQAVRPLTSTVPQASDNFDDRNGSAPSCTKLNEYITL
EQPDRPEEMAEETLRQEAWNEGQDQDQANPPRQRAPSTPDRRCYLVHEEE
RLRGDCEGDSVPLKRQSDECRSETGYVMVQRPCSSSELDKHMSQEAKDAL
QEAPGKVAGDAEAELSGPPWTAKLSPDCGFKSQACDGAPEEEEKTSLSAP
ALPAVIPPVPEQVPAPSTPSETSALREESEHPPFRNRGISNKPRRGSPLK
LSPPTSLGEAPVMRKLIPLETGWAPKVRFVMATSARDSETPLSVIKSVSN
ALSIQTTPDGQSIEVVARSWQELKEAEALLRLVFQYYKGEGKWWLYTIPT
FVSCIIAGIEGTELPQFSNPALGLHCAIAPYDAASTRRAFFLTCPEWGPQ
NAAYHFIRRCWEYWKDLGLERQLDRYLSVLLGVVVVPIRADGNCLFRALA
KSVLGAEGQHLQVRREVVQFMRTSEELRGFIVAEDEGEDDAAFAERYFAE
MEQDGTWGDQVEITAFTRVYRRAVRVWSYNYTEARLLSVVTPLNEATAGS
HGGAGGDAGGEGRLAGAGARGTRGPGEEIWLLHLHGHYSLLEEGKPPRNE
EWEQMLREWGEEKDERTNVLSSPRWEPQEATEDMEADEERAERAENIERQ
GRREFERDCEKDATKEGSRGVQPIRMDEESDLGSASRRGTEGP back to topmRNA from alignment at CM002471.1:449014..452206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7378 ID=rna7378|Name=rna7378|organism=Nannochloropsis gaditana|type=mRNA|length=3193bp|location=Sequence derived from alignment at CM002471.1:449014..452206- (Nannochloropsis gaditana)
CCCTTGCCCGGCGCCCGCGCCCTGAATGACGGACACAGAGGCCAGATGCT
GCCCTAGCGCCTTGCATGACTGTTTCGTGTGGTACACATGTCTCTGCTCG
CTCGTCCTGTAGACGCAGTGCACGCGAAGTGGGTCCATGCATGTCAGCTG
AAGTAGCATAAATATCCACATCTAAATTGGGCCTCACTAGTGGCTGCTTT
CTCTACAACAACAAAAAAGCTACCAGACCACGAGGAAACCTCATGGGATT
TGACTTCATAAAAATGTCAGGGAGCTTATTTCGTCAAGCTGTGAGGCCCC
TGACTTCGACTGTGCCTCAAGCCTCGGACAATTTCGACGACAGGAATGGC
AGTGCACCTAGCTGTACCAAGCTAAACGAGTATATCACTTTAGAACAGCC
TGATCGGCCAGAAGAAATGGCAGAGGAAACTCTTCGACAGGAGGCTTGGA
ATGAAGGGCAAGACCAAGACCAAGCCAATCCGCCAAGACAGCGGGCGCCC
TCGACCCCTGACCGGAGGTGCTACCTCGTGCATGAGGAGGAGAGATTGCG
AGGTGATTGCGAGGGCGATAGTGTCCCTTTGAAACGTCAGTCGGATGAAT
GTAGGTCAGAAACAGGCTATGTGATGGTCCAACGGCCATGCTCGTCGTCG
GAACTGGATAAACATATGAGTCAAGAGGCGAAGGATGCTCTCCAAGAGGC
GCCGGGTAAGGTGGCAGGAGATGCCGAGGCGGAACTTTCGGGCCCACCGT
GGACTGCCAAGCTTTCTCCGGATTGCGGTTTCAAAAGCCAAGCATGCGAC
GGGGCGCCAGAAGAGGAGGAAAAGACTTCCCTGTCGGCCCCTGCGCTGCC
CGCAGTCATCCCCCCTGTACCCGAGCAGGTTCCTGCCCCCTCCACCCCGT
CCGAGACGTCTGCTTTGAGAGAAGAGAGCGAGCACCCTCCCTTCAGGAAT
AGGGGCATCAGCAACAAACCGCGGCGCGGGTCGCCTTTAAAATTGTCCCC
CCCCACGAGCCTGGGAGAGGCGCCGGTCATGAGGAAGCTAATCCCCCTGG
AAACGGGCTGGGCCCCCAAGGTCCGCTTCGTCATGGCGACCTCGGCCCGG
GACTCGGAGACGCCGCTCTCGGTCATCAAGTCCGTGTCGAATGCGCTCTC
CATACAGACCACGCCCGATGGGCAGAGCATCGAGGTGGTGGCCAGGTCCT
GGCAGGAGCTGAAGGAGGCCGAGGCCCTGCTCCGGCTCGTCTTCCAGTAC
TACAAGGGAGAGGGGAAGTGGTGGCTCTACACCATTCCCACCTTCGTCTC
CTGCATCATCGCCGGGATCGAGGGCACGGAGCTCCCTCAGTTCTCGAACC
CGGCCCTGGGCTTGCACTGCGCAATCGCTCCCTACGATGCCGCCTCCACG
CGTCGAGCCTTCTTCTTGACCTGCCCGGAATGGGGGCCCCAGAACGCGGC
CTACCACTTCATCCGCCGGTGCTGGGAGTACTGGAAGGACCTGGGCTTGG
AGCGGCAGCTGGACCGGTACCTGTCGGTGCTCTTGGGGGTGGTGGTGGTG
CCCATCCGGGCGGACGGGAACTGTCTGTTCCGAGCCCTCGCAAAGAGCGT
TTTGGGGGCGGAGGGGCAGCACTTGCAGGTGCGGCGAGAGGTCGTGCAGT
TTATGCGCACGTCGGAGGAGCTGAGAGGCTTCATCGTGGCGGAGGATGAG
GGAGAGGACGATGCGGCCTTTGCGGAGCGGTATTTCGCGGAGATGGAGCA
GGATGGGACGTGGGGAGGTAAGAGGGTGGAGAGGAGGGAGGGGGGACAAA
GGGGTTGGGTTTCTACGGGGCAAAAGAGTGCTAGTTCACCAGGCTGAGGT
GTGAAACGCAAGCGCTTGTGCGAGTCCGCAGTCCTTTCTGCAATGCTGAC
CGCCTTCCCCCTTTTCTGCAGACCAAGTGGAGATCACGGCTTTCACGCGC
GTCTACCGGCGTGCCGTCCGCGTCTGGAGCTACAACTACACAGAGGCGCG
CCTCCTTTCAGTAGTTACACCCCTCAACGAGGCCACGGCAGGCAGTCACG
GGGGAGCGGGGGGCGATGCAGGCGGGGAGGGGAGGCTAGCTGGCGCCGGG
GCAAGGGGCACCCGAGGGCCGGGGGAAGAGATCTGGCTTCTGCACTTGCA
CGGGCATTACTCCCTGCTGGAGGAGGGCAAGCCGCCCAGAAACGAGGAGT
GGGAGCAGATGCTGCGGGAATGGGGAGAGGAGAAGGACGAACGCACCAAT
GTTCTCAGCTCCCCGCGGTGGGAGCCGCAGGAGGCGACGGAGGACATGGA
GGCCGACGAGGAGAGGGCTGAGAGGGCCGAAAACATTGAGAGACAGGGAA
GGCGAGAATTTGAAAGAGATTGCGAAAAAGATGCGACCAAGGAGGGGTCA
AGAGGGGTGCAGCCGATTCGGATGGATGAGGAGAGCGACCTCGGCTCTGC
TTCTCGCAGAGGCACTGAGGGGCCCTAGATAGGGGGAAAGGATTGGTCGC
GACGAAGGGACAGCACATTTGAAGCTAAAGGACAGGAGGAAGGCATTTGG
AACAGATGTCGGTGCGAGCCATGTGGAGGAGCAAGGGAGGCAGGGAATAA
GCACAGGCTGTTGGTGTACTGAAACCTGTGGCTGCTTGGGAGTGAGGTAG
GTATTATACTATACATAGGTTTCAGACGCAATCCCTGAAAGCGTGCCAAG
ACTAATGTCGGCAAGGATTAAGCAGGCAAAGGTCGCCGGCTCGAGTGAGG
GGGCAACCGCCCGAAGTGTGTACATGCTGAGACCGTGAAGGGGGGAGAAG
TTCGGGGGAAAGGGACCGGAAGTGGAGGCATTGGTGTGCTCCGTATACAT
AGCTGAATAGCGGGCCAGATAAGGAGTACTGACTGACCTTCAACGAAACA
GATCGACGAGGGCTGTGCCCTAGGATATACGAAGGCAACATCTGTTAGGG
TTACCCTAACCCTGACCCTAGGCCTAACATCTAATTTCTTCTTGTTGGGC
GATATCTCTTCTCAGTCCTGCAGGCACACGCGTTAATTATTGGCATGGGT
TGTGCCCCCACCTTCCTTAGATTCTATGCACACCCTCCAGTTCGTATATA
ACCAATCCCAGTCGAAAGTAAGGTGACTGCCTCGAGGCCCGTCCACACTC
CCCTCCCGACCCCTGTTCACACGCCACGACCCTCTTCCAATCC back to topCoding sequence (CDS) from alignment at CM002471.1:449014..452206- >rna7378 ID=rna7378|Name=rna7378|organism=Nannochloropsis gaditana|type=CDS|length=4164bp|location=Sequence derived from alignment at CM002471.1:449014..452206- (Nannochloropsis gaditana)
ACCAAGTGGAGATCACGGCTTTCACGCGCGTCTACCGGCGTGCCGTCCGC
GTCTGGAGCTACAACTACACAGAGGCGCGCCTCCTTTCAGTAGTTACACC
CCTCAACGAGGCCACGGCAGGCAGTCACGGGGGAGCGGGGGGCGATGCAG
GCGGGGAGGGGAGGCTAGCTGGCGCCGGGGCAAGGGGCACCCGAGGGCCG
GGGGAAGAGATCTGGCTTCTGCACTTGCACGGGCATTACTCCCTGCTGGA
GGAGGGCAAGCCGCCCAGAAACGAGGAGTGGGAGCAGATGCTGCGGGAAT
GGGGAGAGGAGAAGGACGAACGCACCAATGTTCTCAGCTCCCCGCGGTGG
GAGCCGCAGGAGGCGACGGAGGACATGGAGGCCGACGAGGAGAGGGCTGA
GAGGGCCGAAAACATTGAGAGACAGGGAAGGCGAGAATTTGAAAGAGATT
GCGAAAAAGATGCGACCAAGGAGGGGTCAAGAGGGGTGCAGCCGATTCGG
ATGGATGAGGAGAGCGACCTCGGCTCTGCTTCTCGCAGAGGCACTGAGGG
GCCCTAGATGGGATTTGACTTCATAAAAATGTCAGGGAGCTTATTTCGTC
AAGCTGTGAGGCCCCTGACTTCGACTGTGCCTCAAGCCTCGGACAATTTC
GACGACAGGAATGGCAGTGCACCTAGCTGTACCAAGCTAAACGAGTATAT
CACTTTAGAACAGCCTGATCGGCCAGAAGAAATGGCAGAGGAAACTCTTC
GACAGGAGGCTTGGAATGAAGGGCAAGACCAAGACCAAGCCAATCCGCCA
AGACAGCGGGCGCCCTCGACCCCTGACCGGAGGTGCTACCTCGTGCATGA
GGAGGAGAGATTGCGAGGTGATTGCGAGGGCGATAGTGTCCCTTTGAAAC
GTCAGTCGGATGAATGTAGGTCAGAAACAGGCTATGTGATGGTCCAACGG
CCATGCTCGTCGTCGGAACTGGATAAACATATGAGTCAAGAGGCGAAGGA
TGCTCTCCAAGAGGCGCCGGGTAAGGTGGCAGGAGATGCCGAGGCGGAAC
TTTCGGGCCCACCGTGGACTGCCAAGCTTTCTCCGGATTGCGGTTTCAAA
AGCCAAGCATGCGACGGGGCGCCAGAAGAGGAGGAAAAGACTTCCCTGTC
GGCCCCTGCGCTGCCCGCAGTCATCCCCCCTGTACCCGAGCAGGTTCCTG
CCCCCTCCACCCCGTCCGAGACGTCTGCTTTGAGAGAAGAGAGCGAGCAC
CCTCCCTTCAGGAATAGGGGCATCAGCAACAAACCGCGGCGCGGGTCGCC
TTTAAAATTGTCCCCCCCCACGAGCCTGGGAGAGGCGCCGGTCATGAGGA
AGCTAATCCCCCTGGAAACGGGCTGGGCCCCCAAGGTCCGCTTCGTCATG
GCGACCTCGGCCCGGGACTCGGAGACGCCGCTCTCGGTCATCAAGTCCGT
GTCGAATGCGCTCTCCATACAGACCACGCCCGATGGGCAGAGCATCGAGG
TGGTGGCCAGGTCCTGGCAGGAGCTGAAGGAGGCCGAGGCCCTGCTCCGG
CTCGTCTTCCAGTACTACAAGGGAGAGGGGAAGTGGTGGCTCTACACCAT
TCCCACCTTCGTCTCCTGCATCATCGCCGGGATCGAGGGCACGGAGCTCC
CTCAGTTCTCGAACCCGGCCCTGGGCTTGCACTGCGCAATCGCTCCCTAC
GATGCCGCCTCCACGCGTCGAGCCTTCTTCTTGACCTGCCCGGAATGGGG
GCCCCAGAACGCGGCCTACCACTTCATCCGCCGGTGCTGGGAGTACTGGA
AGGACCTGGGCTTGGAGCGGCAGCTGGACCGGTACCTGTCGGTGCTCTTG
GGGGTGGTGGTGGTGCCCATCCGGGCGGACGGGAACTGTCTGTTCCGAGC
CCTCGCAAAGAGCGTTTTGGGGGCGGAGGGGCAGCACTTGCAGGTGCGGC
GAGAGGTCGTGCAGTTTATGCGCACGTCGGAGGAGCTGAGAGGCTTCATC
GTGGCGGAGGATGAGGGAGAGGACGATGCGGCCTTTGCGGAGCGGTATTT
CGCGGAGATGGAGCAGGATGGGACGTGGGGAGACCAAGTGGAGATCACGG
CTTTCACGCGCGTCTACCGGCGTGCCGTCCGCGTCTGGAGCTACAACTAC
ACAGAGGCGCGCCTCCTTTCAGTAGTTACACCCCTCAACGAGGCCACGGC
AGGCAGTCACGGGGGAGCGGGGGGCGATGCAGGCGGGGAGGGGAGGCTAG
CTGGCGCCGGGGCAAGGGGCACCCGAGGGCCGGGGGAAGAGATCTGGCTT
CTGCACTTGCACGGGCATTACTCCCTGCTGGAGGAGGGCAAGCCGCCCAG
AAACGAGGAGTGGGAGCAGATGCTGCGGGAATGGGGAGAGGAGAAGGACG
AACGCACCAATGTTCTCAGCTCCCCGCGGTGGGAGCCGCAGGAGGCGACG
GAGGACATGGAGGCCGACGAGGAGAGGGCTGAGAGGGCCGAAAACATTGA
GAGACAGGGAAGGCGAGAATTTGAAAGAGATTGCGAAAAAGATGCGACCA
AGGAGGGGTCAAGAGGGGTGCAGCCGATTCGGATGGATGAGGAGAGCGAC
CTCGGCTCTGCTTCTCGCAGAGGCACTGAGGGGCCCTAGATGGGATTTGA
CTTCATAAAAATGTCAGGGAGCTTATTTCGTCAAGCTGTGAGGCCCCTGA
CTTCGACTGTGCCTCAAGCCTCGGACAATTTCGACGACAGGAATGGCAGT
GCACCTAGCTGTACCAAGCTAAACGAGTATATCACTTTAGAACAGCCTGA
TCGGCCAGAAGAAATGGCAGAGGAAACTCTTCGACAGGAGGCTTGGAATG
AAGGGCAAGACCAAGACCAAGCCAATCCGCCAAGACAGCGGGCGCCCTCG
ACCCCTGACCGGAGGTGCTACCTCGTGCATGAGGAGGAGAGATTGCGAGG
TGATTGCGAGGGCGATAGTGTCCCTTTGAAACGTCAGTCGGATGAATGTA
GGTCAGAAACAGGCTATGTGATGGTCCAACGGCCATGCTCGTCGTCGGAA
CTGGATAAACATATGAGTCAAGAGGCGAAGGATGCTCTCCAAGAGGCGCC
GGGTAAGGTGGCAGGAGATGCCGAGGCGGAACTTTCGGGCCCACCGTGGA
CTGCCAAGCTTTCTCCGGATTGCGGTTTCAAAAGCCAAGCATGCGACGGG
GCGCCAGAAGAGGAGGAAAAGACTTCCCTGTCGGCCCCTGCGCTGCCCGC
AGTCATCCCCCCTGTACCCGAGCAGGTTCCTGCCCCCTCCACCCCGTCCG
AGACGTCTGCTTTGAGAGAAGAGAGCGAGCACCCTCCCTTCAGGAATAGG
GGCATCAGCAACAAACCGCGGCGCGGGTCGCCTTTAAAATTGTCCCCCCC
CACGAGCCTGGGAGAGGCGCCGGTCATGAGGAAGCTAATCCCCCTGGAAA
CGGGCTGGGCCCCCAAGGTCCGCTTCGTCATGGCGACCTCGGCCCGGGAC
TCGGAGACGCCGCTCTCGGTCATCAAGTCCGTGTCGAATGCGCTCTCCAT
ACAGACCACGCCCGATGGGCAGAGCATCGAGGTGGTGGCCAGGTCCTGGC
AGGAGCTGAAGGAGGCCGAGGCCCTGCTCCGGCTCGTCTTCCAGTACTAC
AAGGGAGAGGGGAAGTGGTGGCTCTACACCATTCCCACCTTCGTCTCCTG
CATCATCGCCGGGATCGAGGGCACGGAGCTCCCTCAGTTCTCGAACCCGG
CCCTGGGCTTGCACTGCGCAATCGCTCCCTACGATGCCGCCTCCACGCGT
CGAGCCTTCTTCTTGACCTGCCCGGAATGGGGGCCCCAGAACGCGGCCTA
CCACTTCATCCGCCGGTGCTGGGAGTACTGGAAGGACCTGGGCTTGGAGC
GGCAGCTGGACCGGTACCTGTCGGTGCTCTTGGGGGTGGTGGTGGTGCCC
ATCCGGGCGGACGGGAACTGTCTGTTCCGAGCCCTCGCAAAGAGCGTTTT
GGGGGCGGAGGGGCAGCACTTGCAGGTGCGGCGAGAGGTCGTGCAGTTTA
TGCGCACGTCGGAGGAGCTGAGAGGCTTCATCGTGGCGGAGGATGAGGGA
GAGGACGATGCGGCCTTTGCGGAGCGGTATTTCGCGGAGATGGAGCAGGA
TGGGACGTGGGGAG back to top
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