|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100053g28.5055.mrna |
| Orig protein id | gnl|cribi|Naga_100053g28.5055 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:442713..446317 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7375 ID=rna7375|Name=rna7375|organism=Nannochloropsis gaditana|type=mRNA|length=2467bp
TCTTTTCTCTTTATCCTGGACTTTCTCAATATGCCAATGCATCCCCACTC
ATCTCCCATTCACCTTTTCTACACAACGTAATTTGTCGATACCATTTTTC
TCCACCCGTTTTTCTCTCAAGTTATCAAAAGCAGAATTGCAGCCCAAGAA
GCCGCGACCTAGTGACCTAGTCAAGGGCTCCTAATCGCTCAGTGCTCTAT
GGCCCCAGCCACTCCCAAGTACAAGCTGGTGCGGGCGGAAGACAGCGGTG
CAGCGGGCGAAAAAGCAGTGTGCGCATTTTTTACCCTTCCTCAAGGCTGT
CGCAATGGAGCTAATTGTTCCTTTGTGCATGCGGGCACCGTCGCGGCCAC
AGTGCCCGCACCTCGTGCCACGCTCCCCAACACTACCAAGAATTCCCACG
CTATGCAGCAAGTCCGCCTCCAGATCGGAGCAGATAAACAGGGTCAGAGC
AAGAAGCGTACTTCATCCTCGCCGCCATCGTATTCCACCGCTGCCCATGC
GGAACCTCGGAAGCGGTCCAAGAAACAGGAGCCCGAGACGGACGAAAGCA
CTTCTACCGAGGAGGCTGAAGAGGAGGGCTTACCACGGGCTGTGAAGGCC
GCTGTCCATATCGGACCAACTTCTGTCACAGCCGTGTCCAGAAAGAATAA
TATTGCCTCTACTGGCAAGCCAACAGCCGAGCCTTGCGTCGGTCACGACG
TCACGAACCCCTTCCTCGCCGTCGTCCCTCCTCCTCCCGCGACTTCTCAC
CTTAGGCAGCCGGTGGCCGCAGCCGCTAAAAGAGGTGCTCCTGTGCACTC
TGTACAAAAGAAAAGAGGTGACTTCTCTGCGCTGTCTGTGAGCGTGCCGG
TGCAACCAAGCCAGTCCGCTTCCTCGCCGGCGTCCCCCAGGGTTGGGAAC
GGAGTAAGCATGCTTAGCAAGCTATCCGCGCTGCCGGTGACGCCTTTCAC
AATCGCCCGCAAGCCTAATGGAGCCACTCGCGACGACGATGAGCCGGAGG
ATGGAGAGCTGGTTCAAGGGGAGGGCGAGGAAGGCGAGGACAGCGCGCAG
AGTGTAGTAGGGGCCAACCTCTCGCAGCACGCGAAGGAGGAGAGTTGCCA
GGCGGAGGCCGTGAAAGAGGAGGTTTGCTTTCACGCTGGCAGCCCCTGGA
CTGGCTGCGTGAAAGCGACAATGGAGCACGCGCGCTTTGAGGCCAACTAT
CGAGCCCTGGCCGCCCAAAAAAAGGGGGAAGCGGACTGGATCGAGGCGAA
GAAGCACGGCGCTTGGTGCAGAGACCTGCCCCACGTGCTGGCCCTGGACT
GCGAGATGTGTGCCACGCGAGACCCGGTGAGCATGGAGCAGGACGGGAAG
GCGTTGATCCGCCTGAGCGTGGTGTGCGGGCACGACGAGAAGCAGGTGCT
CCTGGACACGCTGGTGCTGCCCTCCCTCCCCGTCATCGACTATCGGACCG
ACATCCACGGGATCCGCCCAGAGGATCTCCGCCAGGTCATGTTCACCTTC
CGCCACGCTCAGGCCGCCATGCTGCACCTGTGCTGCACGGAAACCGTGCT
GATCGGGCACGGCCTTTGCAACGATCTGACGGCGCTCAAGATGAAGCATT
CCCGCGTCGTGGACACCGCCCTCCTCTTCGAGCGGGAGGACGCTCCCAAC
CACACGCCCGCCCTCAAGGACGTGGCCAGCGCGCTCCTGGGTCTGGACAT
GGCCGACATGCACGACTCGGTCGCGGACGCCCAGGTCACCCTCCGCATCG
CCCGCCACTTCCTTGACCGAGGGCCCGTGGCGCCGGTCCCCCGCCTGCCG
GCTGCTCCCAACAAGAAGGGGCGGCGGGCGGAGGCGGTCCAGTCCTGCCT
CCTGCTGCACCGCATCCCCTCCTTTGTCACGGCCGCGCACATCAAGGACA
TGTTCCAGACCCGCACCCACGTGGCCCCTGTAACCGTCGATCCCGTGGCG
ACCTCGGGGGCCGAGGGCTCCCTGGGGCGAGCCACCGCCCGCTTTCTCTC
CAAGGGCCATGCCGACCTTGCCTTTGCGACTCTGACGGGGCCAGCCCGCC
CGGACAAGGACGGGCGCCTTCAGAAACGCGTGCACTTGGCGGGGAAAAAA
GATTACGTCCAGGTCCGGCTCATGTATGCGCCGGGCGAGGCCGGGCACGA
GGGGCGGGATGGAGAAGAGGAACCGGACTTACCGTCGGCGAAAGTATTCT
AGATATGTCGATGAAAGTAGATGTAGATGTCCCGGTCGGGGAACATCAGT
AGGTGAGGAGCCACAACTACCCCCTCCATGTTGGCAGGGCAGAGCAAAGC
GGTTTTTGGATTTGAAAGCAAGGTGATGGGCTACCAGACGCACCCGATGG
GTACAATCTTTCTTGGCGTCTGTGAATTATTTGCTTTCAGATTTATGTAC
TCTATGTGGTCCTAAACACCTCGCATCTCTTAGCGGACGCGCCGTTCCCC
TCCCAGAGCGTTCCCCC back to topprotein sequence of rna7375 >rna7375-protein ID=rna7375-protein|Name=rna7375|organism=Nannochloropsis gaditana|type=polypeptide|length=872bp
MRAAAVRRDPGAPSGLAEAGPPAPALAAFVRVANQHMEELVEHVPSFQYL
EQLVVAQEAARFLAARRISLPVPAGLAALRSPLSGRHRVPALHLERTRVL
SYAGVVLVDRLDMSLLRLGEDVALGPGSRALLEGLPEQRGGRGRVRRFAC
GLRNGSTHDLQNLHQLFASNVSLECRREMSWAEHMAGERTSAEEGEREQA
PEEAAEYEACPEALAFWSTEAEEWRVWASETLRKARRAPGGNGNEGRGKR
VGEEEGKGEGDDGAGREEEKEVGGEEQTISEEICAEIQGVEDGKESGLGQ
EGEHKEEEEEEKVEGEEKVEYEAASLAETVAYNVTGRVLILGRVDWADED
DCREDPTFSKKEEGMEEEEGRVLLAMENQSGLTEAIALHEPVGVLLVQLE
EMRQRRRRDTSKPKGGKEERRRGSAPRQKGVEDDGLYPTLPPGLPVRFIS
EDVARDIQKAECRHGVLHVWLTCGMERDLGSGQQEEEEKEGGEEEERGGK
RSLVHEGALYRTLDAVLVDAEHTGCQEQDLPLPEGFEIAPASPGVVEAVV
RQHRWGTSSLLLQATEGGGEGPGERLQVPPAFASLATAALFGQGGRAMET
GDLVVRASEGSGPPRYRPRQCDARILIRTAVCTVSYGGYSYRVLESGVPV
DLLEVPGAPAVFEGLRGLQLPEGWELSPVNRGIAQRVVGAHAWGTDALIL
ADGKGYPTLLYFHRRSQQQKEQQRQEGEGRAPLAPHHRILIRRRDSDQGG
DVAPEEAGEGEEKGGEGDLRMGDMYRADANAVLEFRRLAREGGGYLLEIE
VSERVMIHGGVDLTSVRRVSRDETAAGGQWQGEGEKSVLAALGRDLARGQ
VGGTLWEGNGASAKRCEVFRTT back to topmRNA from alignment at CM002471.1:442713..446317- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7375 ID=rna7375|Name=rna7375|organism=Nannochloropsis gaditana|type=mRNA|length=3605bp|location=Sequence derived from alignment at CM002471.1:442713..446317- (Nannochloropsis gaditana)
TTCTTCTCTCTTGTTTGAAGGCTGGCAGGCAACCCAGGACCTTACTTTTC
CTAGAGGGCAAGGGCGTCGCCGTCCTCGCCGACGGTAGGGCCCATCCCCG
AAGGGGGGCTCCAGCAGGACTTGGCTTGCGTGCAGTGAGACGTCATGACG
ACATCGAGAATACCTTTGTTTGCCAGCGCATGCGGTGTAGTATTGGCAGC
AATGCTTCTGGGACTAGCGCAAGCGGAGGGGCCTTCCATGGGTACGTTTT
AGCAGTTTATTTCTCTTTGCTTGATGTACTTGAGCTAACTGTGTTCATTA
TCTGTACAAACACAGAAGATGCGGATCTCTCGTCAACCATGGAGCACAAT
GTGGATGGCCCCGTAAGTATTCGGTCACAAAAATTTTCATTCCTGCGTCT
TCCGTCCCTCTTTCCGCGCTTGGAGCCCGCCTCCGCGTCCCCGGAGCGTA
GCTTCCACAGCCTGGAGGCCCTATCAGTCGATCCAGAGACAGGTGGCGTC
TACTGGGCCACGCAGCCCTGCCAGGCCCAGTCCAACAAGCCGTGCCTGTC
ATCTGTGACCAGTGTGCAGTTACTGCGGCAGGTGCTGGATGATCCGGGCC
TGTGCGGCGCGGGAATCAGCTTCACCCTTGATCCCGAGGACCCAAGCCAG
CCCCTGGGCCCCTACTTCCGGAAGAACTTCCACCCCGCCGCCTGCGCTGA
CCTCTGGTACGACCTGCTCCCTGGGGCGGTCATGTTCGAGGCCGACTGGG
ACCTGAAGCTCCTGCTGCACGACGTGGACGGCCGGGCGCAGGGCCTTGGC
CCCTGGTACCGGTCTATCGAGGCTCTGAGCCGCGCCTTCCCCCCCCCCTC
GGGGCCGAGGTGCTGGGCAAGGTCTGGCTGGTGGCGGAGACCCTGGAAGT
GGAAGAGTCGGCGCACGGCATCGCCTTCGGGAAGGTGGCCCTGCGCATGC
GGGCTGCGGCCGTCCGCCGGGACCCGGGCGCCCCCTCGGGCCTCGCCGAG
GCCGGCCCCCCCGCCCCGGCCCTGGCCGCCTTCGTCCGCGTCGCGAACCA
GCACATGGAGGAGCTCGTCGAGCACGTTCCCTCCTTCCAGTACCTAGAGC
AGCTAGTCGTCGCCCAGGAGGCCGCCCGGTTCCTGGCGGCGCGGCGGATT
TCTCTGCCGGTCCCGGCCGGTCTCGCCGCTCTGCGCTCCCCCCTGAGCGG
CCGCCACCGGGTCCCGGCCCTGCACTTGGAACGGACGCGGGTGCTCAGCT
ATGCGGGCGTCGTGCTGGTGGACCGGTTGGACATGTCCCTGCTGCGCTTG
GGCGAGGACGTGGCCCTGGGTCCCGGGAGCCGGGCGCTGCTGGAGGGCCT
GCCCGAGCAAAGAGGGGGCCGCGGTCGCGTCCGCCGCTTCGCCTGCGGCC
TTCGCAACGGCAGCACGCACGACCTGCAGAACCTGCATCAGCTCTTTGCG
AGCAACGTATCCTTGGAGTGCCGACGTGAGATGAGTTGGGCCGAGCACAT
GGCTGGAGAAAGAACCTCGGCGGAGGAGGGGGAGCGAGAGCAGGCGCCGG
AGGAGGCCGCTGAATACGAAGCTTGTCCTGAGGCCCTGGCATTCTGGTCC
ACAGAGGCGGAGGAATGGAGGGTATGGGCCAGTGAGACTCTGCGGAAGGC
CCGAAGGGCCCCTGGTGGCAATGGAAACGAGGGGCGGGGGAAAAGGGTGG
GCGAGGAGGAGGGGAAGGGGGAAGGGGACGACGGGGCTGGGCGGGAGGAG
GAGAAGGAGGTGGGCGGAGAGGAGCAGACAATTTCGGAGGAGATATGCGC
GGAGATCCAGGGAGTAGAGGACGGAAAAGAGAGTGGGCTTGGACAAGAAG
GGGAGCACAAGGAAGAGGAGGAGGAGGAAAAGGTGGAGGGCGAGGAGAAG
GTTGAGTACGAAGCAGCGAGTCTGGCAGAGACAGTTGCATACAACGTAAC
TGGCAGGGTGCTGATCCTGGGTCGAGTGGATTGGGCGGATGAGGATGACT
GCAGGGAGGATCCAACCTTTTCGAAGAAGGAGGAGGGCATGGAGGAAGAG
GAGGGGAGGGTGCTTTTGGCGATGGAAAACCAAAGCGGTTTGACCGAAGC
GATCGCGCTCCACGAGCCTGTGGGTGTTCTGCTTGTCCAGTTGGAGGAAA
TGAGGCAGCGGCGACGGCGGGATACGAGTAAGCCTAAGGGAGGGAAGGAG
GAGAGGAGGAGGGGCAGCGCCCCAAGGCAGAAGGGCGTGGAGGATGACGG
GCTGTATCCCACCCTCCCGCCCGGCCTGCCCGTTCGGTTCATATCTGAGG
ATGTGGCCCGGGATATTCAAAAGGCCGAATGCCGGCATGGAGTGTTGCAT
GTATGGTTAACGTGCGGGATGGAGCGGGATCTGGGGTCAGGCCAGCAGGA
GGAGGAGGAGAAGGAGGGCGGGGAAGAGGAGGAACGGGGCGGGAAGCGCT
CCCTGGTGCACGAGGGAGCGCTCTACCGGACCTTGGACGCCGTCCTAGTC
GACGCCGAGCATACCGGGTGCCAAGAACAGGATCTGCCCCTCCCAGAGGG
CTTCGAGATAGCGCCTGCCTCACCTGGGGTGGTAGAGGCGGTGGTGCGAC
AGCACAGGTGGGGCACTAGCTCCCTCCTCCTCCAGGCCACCGAGGGCGGG
GGCGAGGGGCCGGGGGAGCGGCTGCAGGTGCCCCCAGCCTTTGCTTCCCT
CGCCACGGCGGCGCTGTTTGGTCAGGGAGGCCGGGCGATGGAGACGGGGG
ACCTGGTCGTCCGGGCCAGTGAGGGCTCCGGTCCGCCGCGCTATCGGCCC
CGGCAATGCGACGCCCGCATCCTCATCCGCACGGCCGTCTGCACCGTCAG
TTACGGTGGCTACTCATACCGCGTGCTGGAGTCTGGCGTGCCCGTAGACC
TGCTGGAGGTGCCGGGCGCGCCTGCTGTCTTCGAAGGACTGCGCGGCCTC
CAGCTGCCCGAGGGATGGGAGTTGTCGCCCGTGAACCGGGGTATCGCGCA
GAGGGTGGTGGGCGCGCACGCATGGGGGACTGACGCGCTGATCCTGGCCG
ACGGTAAGGGGTATCCCACTCTGCTCTATTTCCACCGCCGATCCCAACAG
CAGAAAGAGCAGCAGCGACAAGAGGGAGAGGGCCGGGCTCCTCTCGCCCC
GCATCACCGGATCTTGATCCGACGGCGGGATTCGGACCAGGGTGGCGACG
TGGCGCCCGAAGAGGCTGGCGAAGGAGAAGAAAAGGGCGGGGAGGGAGAC
CTGCGCATGGGAGACATGTACCGCGCTGATGCGAATGCCGTGCTCGAGTT
CAGGAGGCTCGCGAGGGAGGGCGGGGGTTACCTGCTTGAAATAGAGGTGA
GCGAGCGGGTCATGATCCACGGAGGGGTGGATCTGACGTCCGTGAGGCGC
GTCAGCCGAGACGAGACGGCGGCTGGGGGGCAGTGGCAGGGAGAAGGGGA
GAAGAGTGTCTTGGCGGCTTTGGGAAGGGACCTGGCAAGGGGTCAAGTCG
GGGGAACGCTCTGGGAGGGGAACGGCGCGTCCGCTAAGAGATGCGAGGTG
TTTAGGACCACATAGAGTACATAAATCTGAAAGCAAATAATTCACAGACG
CCAAG back to topCoding sequence (CDS) from alignment at CM002471.1:442713..446317- >rna7375 ID=rna7375|Name=rna7375|organism=Nannochloropsis gaditana|type=CDS|length=2619bp|location=Sequence derived from alignment at CM002471.1:442713..446317- (Nannochloropsis gaditana)
ATGCGGGCTGCGGCCGTCCGCCGGGACCCGGGCGCCCCCTCGGGCCTCGC
CGAGGCCGGCCCCCCCGCCCCGGCCCTGGCCGCCTTCGTCCGCGTCGCGA
ACCAGCACATGGAGGAGCTCGTCGAGCACGTTCCCTCCTTCCAGTACCTA
GAGCAGCTAGTCGTCGCCCAGGAGGCCGCCCGGTTCCTGGCGGCGCGGCG
GATTTCTCTGCCGGTCCCGGCCGGTCTCGCCGCTCTGCGCTCCCCCCTGA
GCGGCCGCCACCGGGTCCCGGCCCTGCACTTGGAACGGACGCGGGTGCTC
AGCTATGCGGGCGTCGTGCTGGTGGACCGGTTGGACATGTCCCTGCTGCG
CTTGGGCGAGGACGTGGCCCTGGGTCCCGGGAGCCGGGCGCTGCTGGAGG
GCCTGCCCGAGCAAAGAGGGGGCCGCGGTCGCGTCCGCCGCTTCGCCTGC
GGCCTTCGCAACGGCAGCACGCACGACCTGCAGAACCTGCATCAGCTCTT
TGCGAGCAACGTATCCTTGGAGTGCCGACGTGAGATGAGTTGGGCCGAGC
ACATGGCTGGAGAAAGAACCTCGGCGGAGGAGGGGGAGCGAGAGCAGGCG
CCGGAGGAGGCCGCTGAATACGAAGCTTGTCCTGAGGCCCTGGCATTCTG
GTCCACAGAGGCGGAGGAATGGAGGGTATGGGCCAGTGAGACTCTGCGGA
AGGCCCGAAGGGCCCCTGGTGGCAATGGAAACGAGGGGCGGGGGAAAAGG
GTGGGCGAGGAGGAGGGGAAGGGGGAAGGGGACGACGGGGCTGGGCGGGA
GGAGGAGAAGGAGGTGGGCGGAGAGGAGCAGACAATTTCGGAGGAGATAT
GCGCGGAGATCCAGGGAGTAGAGGACGGAAAAGAGAGTGGGCTTGGACAA
GAAGGGGAGCACAAGGAAGAGGAGGAGGAGGAAAAGGTGGAGGGCGAGGA
GAAGGTTGAGTACGAAGCAGCGAGTCTGGCAGAGACAGTTGCATACAACG
TAACTGGCAGGGTGCTGATCCTGGGTCGAGTGGATTGGGCGGATGAGGAT
GACTGCAGGGAGGATCCAACCTTTTCGAAGAAGGAGGAGGGCATGGAGGA
AGAGGAGGGGAGGGTGCTTTTGGCGATGGAAAACCAAAGCGGTTTGACCG
AAGCGATCGCGCTCCACGAGCCTGTGGGTGTTCTGCTTGTCCAGTTGGAG
GAAATGAGGCAGCGGCGACGGCGGGATACGAGTAAGCCTAAGGGAGGGAA
GGAGGAGAGGAGGAGGGGCAGCGCCCCAAGGCAGAAGGGCGTGGAGGATG
ACGGGCTGTATCCCACCCTCCCGCCCGGCCTGCCCGTTCGGTTCATATCT
GAGGATGTGGCCCGGGATATTCAAAAGGCCGAATGCCGGCATGGAGTGTT
GCATGTATGGTTAACGTGCGGGATGGAGCGGGATCTGGGGTCAGGCCAGC
AGGAGGAGGAGGAGAAGGAGGGCGGGGAAGAGGAGGAACGGGGCGGGAAG
CGCTCCCTGGTGCACGAGGGAGCGCTCTACCGGACCTTGGACGCCGTCCT
AGTCGACGCCGAGCATACCGGGTGCCAAGAACAGGATCTGCCCCTCCCAG
AGGGCTTCGAGATAGCGCCTGCCTCACCTGGGGTGGTAGAGGCGGTGGTG
CGACAGCACAGGTGGGGCACTAGCTCCCTCCTCCTCCAGGCCACCGAGGG
CGGGGGCGAGGGGCCGGGGGAGCGGCTGCAGGTGCCCCCAGCCTTTGCTT
CCCTCGCCACGGCGGCGCTGTTTGGTCAGGGAGGCCGGGCGATGGAGACG
GGGGACCTGGTCGTCCGGGCCAGTGAGGGCTCCGGTCCGCCGCGCTATCG
GCCCCGGCAATGCGACGCCCGCATCCTCATCCGCACGGCCGTCTGCACCG
TCAGTTACGGTGGCTACTCATACCGCGTGCTGGAGTCTGGCGTGCCCGTA
GACCTGCTGGAGGTGCCGGGCGCGCCTGCTGTCTTCGAAGGACTGCGCGG
CCTCCAGCTGCCCGAGGGATGGGAGTTGTCGCCCGTGAACCGGGGTATCG
CGCAGAGGGTGGTGGGCGCGCACGCATGGGGGACTGACGCGCTGATCCTG
GCCGACGGTAAGGGGTATCCCACTCTGCTCTATTTCCACCGCCGATCCCA
ACAGCAGAAAGAGCAGCAGCGACAAGAGGGAGAGGGCCGGGCTCCTCTCG
CCCCGCATCACCGGATCTTGATCCGACGGCGGGATTCGGACCAGGGTGGC
GACGTGGCGCCCGAAGAGGCTGGCGAAGGAGAAGAAAAGGGCGGGGAGGG
AGACCTGCGCATGGGAGACATGTACCGCGCTGATGCGAATGCCGTGCTCG
AGTTCAGGAGGCTCGCGAGGGAGGGCGGGGGTTACCTGCTTGAAATAGAG
GTGAGCGAGCGGGTCATGATCCACGGAGGGGTGGATCTGACGTCCGTGAG
GCGCGTCAGCCGAGACGAGACGGCGGCTGGGGGGCAGTGGCAGGGAGAAG
GGGAGAAGAGTGTCTTGGCGGCTTTGGGAAGGGACCTGGCAAGGGGTCAA
GTCGGGGGAACGCTCTGGGAGGGGAACGGCGCGTCCGCTAAGAGATGCGA
GGTGTTTAGGACCACATAG back to top
|