rna7371, rna7371 (mRNA) Nannochloropsis gaditana

Overview
Namerna7371
Unique Namerna7371
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1493
Alignment locationCM002471.1:433124..434752 -

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Properties
Property NameValue
ProductKinase phosphorylation domain protein
Orig transcript idgnl|cribi|Naga_100053g24.5062.mrna
Orig protein idgnl|cribi|Naga_100053g24.5062
GbkeymRNA
Noteencoded by transcript variant 3; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:433124..434752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100053g24gene7131Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7371rna7371-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23322.1cds7354Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7371 ID=rna7371|Name=rna7371|organism=Nannochloropsis gaditana|type=mRNA|length=1493bp
AGGCTAAGATCCGACTTGTCCCACACTTCATGGCCACTGTGCTGTCCGTA
CGTGTGTCGATGGGGCAAAGGATGAGTAGGGAGGCTCTCTTGACGAAGGG
TGTGATCTAACTCTGAGAAAGCAAGCAGGAGGGAATGGAACTTTCCCATC
GCTACGCAGGATTATATGTTTGTGAAGACCAACGCCCGAACTCACATGCT
CATTGTTCTGTTTCTCGTGCACCACCCGCCCAGGGAGAGGCTCTCTAAGC
GGAGGTACACGGCTGGAGAGGGAGGCTTCAGCATGTCCTTTGGCCCCAAG
ACAGGCTACCGTGACGGCGGCACCAGGGGGGGGCAGGACCGTTTTAAGTG
GGAAGATGTTAAGGACGGTGCGTATTGTCCTTGCGACCTTTAGATCCACA
CTGTCCGACCACATTCGCTTTTCTTTGTCGTCGATTCCAATTTCAATTCA
ACGGCTTTGTGCACTATGACCTCTTTCTCCGGTCCTTGTCAATCTTTCGT
TCTGCTGGCTGTGGATAGCTGTTAACTCACCACCTCTCCTGATTCTTTAC
CCTCTCCCATACCCCATGCATCATCCGGCGCACACCGTGTTTCCGAAGAG
CACTACCGAGAGCACTACCTTGGGCACAGCCTCAAGGCGCCAGTGGGTCG
GTGGCAGAAGGGCAAGGACCTGATGTGGTACACAAAGGCCGGCAAGGTGA
AAAGTGGGGAGGCAGAGGACCCGGAGGCGCAGAGGCAGCGGGAGGTGGCG
GAGATCAGGCAGCGGGACGAGGAGATGATCAACGCCGCGCTAGGAATGGC
CCCAAAGTACCAGGCGGTGGTCGAGAGCCGGCTGGAGGCGAGCGAGCTGA
AGCAGCTCCTTGGAAAGGGCCTCTCCGAGCGTGACGACCTGCACGGCGAG
CGCGTGGAGGGAGTGGGCGCGGCGCCGGCCCCCCGGCACGAGCACTTGCC
TAAGGGCTTGTCCATGGTCGAGAGGGAGATCGAGCGCATGAAGAGCGCGC
AAGCACAGGGCGTCGCTTTCAAGTATGAGGACGACGCCACACACCTCTAC
GCCGAGCAGGAGGCCGAGGGTGGGGGCCACACCCACGCGGGGAACAAGAG
GAAAGATTCGTCGAAACGAGAGTCTCTTAAAGATTATGGGGGCTCAACAA
GGGAAGAGAAAAAGCTGAAGAAAGAAGAAAAGCGGCGAAAGAAGGAGGAA
AAGAGGGAGCGCAAACAAGACAAGAAGCGTCAGAGAAAAGAAAAAATACT
GGCTGTGGCCGAGGAGGCCATGCCAAGCAGGCACACATCTCGGCCTGCAA
GGAACGGCCGTAGCAGAAGTCCTGACCAGAAGCACCGACGACAAGACGGT
GGTAGGTCGTGCTCTCCCGCCCACGGGTCAAGAGGACGCCGCGTGCATTG
ATCACCCCTGATGGGAATCGGACGAGGTCGAGCACAAAGCCAGAAGCACC
GTAGGGAATGAAAGGAAAAGTAATTTTTGCATTCACGCTTGCA
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protein sequence of rna7371

>rna7371-protein ID=rna7371-protein|Name=rna7371|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MSPGRCRKVDPRNSVLPPRLMIIITPPNTIPGFSMSFGPKTGYRDGGTRG
GQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGE
AEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLL
GKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQG
VAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEK
KLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGR
SRSPDQKHRRQDGGRSCSPAHGSRGRRVH
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mRNA from alignment at CM002471.1:433124..434752-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7371 ID=rna7371|Name=rna7371|organism=Nannochloropsis gaditana|type=mRNA|length=1629bp|location=Sequence derived from alignment at CM002471.1:433124..434752- (Nannochloropsis gaditana)
ATGCACGACTAATAGAGTAGACAGGATGGACTTGGAGGAGACGCCCACTA
TCTCCAATGAAAGGTGTACAGCTCGGCTGACGGGGTAGAATGACCTCTGT
AGCCTTTACGTCTCTTATATCGGAAGATCAGCATCACAATGAGACATAGA
GGCAAAGGCTTTTCTTGCTCAGGACAGTAGGCAGCGTGCAGAGGTGGCAA
TTAGTTCCAGGAAGGGATGTAGTGGAGTAGGAAAATTCAATTTATCAATT
GTACTCATGAATGCGAATATCTTAGCGTAGTGAACTGTGTCTTTAAGGGC
TGCGCAGGGTATTTAAATGAGTCCGGGCAGGTGTAGGAAAGTGGATCCAA
GAAATTCCGTGCTACCACCCCGCCTCATGATCATCATTACCCCGCCAAAC
ACAATCCCAGGCTTCAGCATGTCCTTTGGCCCCAAGACAGGCTACCGTGA
CGGCGGCACCAGGGGGGGGCAGGACCGTTTTAAGTGGGAAGATGTTAAGG
ACGGTGCGTATTGTCCTTGCGACCTTTAGATCCACACTGTCCGACCACAT
TCGCTTTTCTTTGTCGTCGATTCCAATTTCAATTCAACGGCTTTGTGCAC
TATGACCTCTTTCTCCGGTCCTTGTCAATCTTTCGTTCTGCTGGCTGTGG
ATAGCTGTTAACTCACCACCTCTCCTGATTCTTTACCCTCTCCCATACCC
CATGCATCATCCGGCGCACACCGTGTTTCCGAAGAGCACTACCGAGAGCA
CTACCTTGGGCACAGCCTCAAGGCGCCAGTGGGTCGGTGGCAGAAGGGCA
AGGACCTGATGTGGTACACAAAGGCCGGCAAGGTGAAAAGTGGGGAGGCA
GAGGACCCGGAGGCGCAGAGGCAGCGGGAGGTGGCGGAGATCAGGCAGCG
GGACGAGGAGATGATCAACGCCGCGCTAGGAATGGCCCCAAAGTACCAGG
CGGTGGTCGAGAGCCGGCTGGAGGCGAGCGAGCTGAAGCAGCTCCTTGGA
AAGGGCCTCTCCGAGCGTGACGACCTGCACGGCGAGCGCGTGGAGGGAGT
GGGCGCGGCGCCGGCCCCCCGGCACGAGCACTTGCCTAAGGGCTTGTCCA
TGGTCGAGAGGGAGATCGAGCGCATGAAGAGCGCGCAAGCACAGGGCGTC
GCTTTCAAGTATGAGGACGACGCCACACACCTCTACGCCGAGCAGGAGGC
CGAGGGTGGGGGCCACACCCACGCGGGGAACAAGAGGAAAGATTCGTCGA
AACGAGAGTCTCTTAAAGATTATGGGGGCTCAACAAGGGAAGAGAAAAAG
CTGAAGAAAGAAGAAAAGCGGCGAAAGAAGGAGGAAAAGAGGGAGCGCAA
ACAAGACAAGAAGCGTCAGAGAAAAGAAAAAATACTGGCTGTGGCCGAGG
AGGCCATGCCAAGCAGGCACACATCTCGGCCTGCAAGGAACGGCCGTAGC
AGAAGTCCTGACCAGAAGCACCGACGACAAGACGGTGGTAGGTCGTGCTC
TCCCGCCCACGGGTCAAGAGGACGCCGCGTGCATTGATCACCCCTGATGG
GAATCGGACGAGGTCGAGCACAAAGCCAGAAGCACCGTAGGGAATGAAAG
GAAAAGTAATTTTTGCATTCACGCTTGCA
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Coding sequence (CDS) from alignment at CM002471.1:433124..434752-

>rna7371 ID=rna7371|Name=rna7371|organism=Nannochloropsis gaditana|type=CDS|length=1980bp|location=Sequence derived from alignment at CM002471.1:433124..434752- (Nannochloropsis gaditana)
AGCACTACCGAGAGCACTACCTTGGGCACAGCCTCAAGGCGCCAGTGGGT
CGGTGGCAGAAGGGCAAGGACCTGATGTGGTACACAAAGGCCGGCAAGGT
GAAAAGTGGGGAGGCAGAGGACCCGGAGGCGCAGAGGCAGCGGGAGGTGG
CGGAGATCAGGCAGCGGGACGAGGAGATGATCAACGCCGCGCTAGGAATG
GCCCCAAAGTACCAGGCGGTGGTCGAGAGCCGGCTGGAGGCGAGCGAGCT
GAAGCAGCTCCTTGGAAAGGGCCTCTCCGAGCGTGACGACCTGCACGGCG
AGCGCGTGGAGGGAGTGGGCGCGGCGCCGGCCCCCCGGCACGAGCACTTG
CCTAAGGGCTTGTCCATGGTCGAGAGGGAGATCGAGCGCATGAAGAGCGC
GCAAGCACAGGGCGTCGCTTTCAAGTATGAGGACGACGCCACACACCTCT
ACGCCGAGCAGGAGGCCGAGGGTGGGGGCCACACCCACGCGGGGAACAAG
AGGAAAGATTCGTCGAAACGAGAGTCTCTTAAAGATTATGGGGGCTCAAC
AAGGGAAGAGAAAAAGCTGAAGAAAGAAGAAAAGCGGCGAAAGAAGGAGG
AAAAGAGGGAGCGCAAACAAGACAAGAAGCGTCAGAGAAAAGAAAAAATA
CTGGCTGTGGCCGAGGAGGCCATGCCAAGCAGGCACACATCTCGGCCTGC
AAGGAACGGCCGTAGCAGAAGTCCTGACCAGAAGCACCGACGACAAGACG
GTGGTAGGTCGTGCTCTCCCGCCCACGGGTCAAGAGGACGCCGCGTGCAT
TGAATGAGTCCGGGCAGGTGTAGGAAAGTGGATCCAAGAAATTCCGTGCT
ACCACCCCGCCTCATGATCATCATTACCCCGCCAAACACAATCCCAGGCT
TCAGCATGTCCTTTGGCCCCAAGACAGGCTACCGTGACGGCGGCACCAGG
GGGGGGCAGGACCGTTTTAAGTGGGAAGATGTTAAGGACGAGCACTACCG
AGAGCACTACCTTGGGCACAGCCTCAAGGCGCCAGTGGGTCGGTGGCAGA
AGGGCAAGGACCTGATGTGGTACACAAAGGCCGGCAAGGTGAAAAGTGGG
GAGGCAGAGGACCCGGAGGCGCAGAGGCAGCGGGAGGTGGCGGAGATCAG
GCAGCGGGACGAGGAGATGATCAACGCCGCGCTAGGAATGGCCCCAAAGT
ACCAGGCGGTGGTCGAGAGCCGGCTGGAGGCGAGCGAGCTGAAGCAGCTC
CTTGGAAAGGGCCTCTCCGAGCGTGACGACCTGCACGGCGAGCGCGTGGA
GGGAGTGGGCGCGGCGCCGGCCCCCCGGCACGAGCACTTGCCTAAGGGCT
TGTCCATGGTCGAGAGGGAGATCGAGCGCATGAAGAGCGCGCAAGCACAG
GGCGTCGCTTTCAAGTATGAGGACGACGCCACACACCTCTACGCCGAGCA
GGAGGCCGAGGGTGGGGGCCACACCCACGCGGGGAACAAGAGGAAAGATT
CGTCGAAACGAGAGTCTCTTAAAGATTATGGGGGCTCAACAAGGGAAGAG
AAAAAGCTGAAGAAAGAAGAAAAGCGGCGAAAGAAGGAGGAAAAGAGGGA
GCGCAAACAAGACAAGAAGCGTCAGAGAAAAGAAAAAATACTGGCTGTGG
CCGAGGAGGCCATGCCAAGCAGGCACACATCTCGGCCTGCAAGGAACGGC
CGTAGCAGAAGTCCTGACCAGAAGCACCGACGACAAGACGGTGGTAGGTC
GTGCTCTCCCGCCCACGGGTCAAGAGGACGCCGCGTGCATTGAATGAGTC
CGGGCAGGTGTAGGAAAGTGGATCCAAGAAATTCCGTGCTACCACCCCGC
CTCATGATCATCATTACCCCGCCAAACACAATCCCAGGCTTCAGCATGTC
CTTTGGCCCCAAGACAGGCTACCGTGACGGCGGCACCAGGGGGGGGCAGG
ACCGTTTTAAGTGGGAAGATGTTAAGGACG
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Synonyms
Publications