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Properties
| Property Name | Value |
|---|
| Product | Tetratricopeptide-like helical |
| Orig transcript id | gnl|cribi|Naga_100053g21.5058.mrna |
| Orig protein id | gnl|cribi|Naga_100053g21.5058 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:422032..425385 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7366 ID=rna7366|Name=rna7366|organism=Nannochloropsis gaditana|type=mRNA|length=1086bp
AAGTCGTGCAACTGTGCTGTAATGCTGGGCCTCAGCATGTATGTGTCTTG
TCGCCGTCGCATTGGGAGACCACCGCATTGTCCGCAGAATCTCGGGCATC
AGCTTCATAGTCATTTTGCAGTGAAGGCGAGACGAATTCTCTTCAAGCAT
CAGGCGACAGGCTGCAAGGAGAGACCGCACGTGCCGGCGAAAATTAAGTC
ATTTAGCCAGCGATAAAGGGTGTGCGACTTCGTGCACACGTTCTAACGCA
CGATGAGCCTTCGTGCACCATTCTAAAGCAAGCAATCAGCAGATCAAGCT
ACTTGCTTGACAGATTTCACCATGCCTTTTGTCAATATTCGCACCTCTGC
TCAGTTGGATGCCTCGGGAGTCAAGGCTGTGACAGATGCTGCACACAACG
CTATTCGTGACGTGCTCAATAAGCCTGACCAGTACATTGCAGTGGACGTG
ACAGTGAGCCCAAACCTTCAATTTGGAGGAACTAAAGCACCTGCAGCAAT
GATAAGCGTCCACTCTATTGGTTATGGTGCCAACGCGAAGGCGAACAAAG
AAGCTCTTCTCAAGGCTCTGGGAACTGCTATGAAAGCTGCTGGAGACGTT
CCTGGTGACCGACTTTTTGTCTCCTTCGAAGACGTTCACAAAGATTTTTG
GGGGTTCAACGGACAACTCTTCTCTACAATTTTCGGCTGACGAGTCCAGA
TTCGAACGTCATGGATCCTTCCGTGGTGTCACACTGCCGACGTGATCAAC
CAGTCTTGGCATGAGCAAGAGGAAAAAAATCAATTCGGGCGATTCCTGGG
CTAGAGTTCTCTGTTAGCTAGCTTTACTTCATCTCTACAATTACTTGGTC
GGCGCGTTCCCCAAACACCTCAGCTCATACTCAAATACCTTCAACTGAAA
AAGGGATAACTAAGCGCATGGGCTCACTTTACCTCCACTTGTCGCTCACC
ATATCAAGTGGATTTCATCCTTCGAATGTCTCCATTTCCGCATGGTAAAT
CATGGCATTCGATCCTAAAATTACTTATGTGTTCCATCGCGTGTATTTTC
AAGATGCCAGTAACATAAACGTTATACGTAAGTTCC back to topprotein sequence of rna7366 >rna7366-protein ID=rna7366-protein|Name=rna7366|organism=Nannochloropsis gaditana|type=polypeptide|length=659bp
MTESDKGRVGNQCGHHASGTSRGHKRIRRLAGFCCLASCVPVKAFLGAGM
GVGPMSTPVRAQTFHPLTYQSRHDGVANSILNGRTRLQVAQIPAPMDWNV
AAWPDLPIVNETAMSGRNNEMRAGWAKLSHMGSTLTRPAQSSSGTKVILS
PSPSKKSSADRAVRQVVAQGRLGKAVDLLVSLSEEEDGLHAIDRALVNFV
LYNCMRRRDWTRALTVLDAPLIEVDVVGFTMAIKACGQARRWREALGVLR
EMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYN
TAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAA
LELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQP
DVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRA
LKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEV
RGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIAMD
AMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGDEEGERLTK
IVHESRQRGHARQRGERNGPGEGGESSDGDLAGGYGELFPTGSRQFRQTQ
IGSSTLWGL back to topmRNA from alignment at CM002471.1:422032..425385- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7366 ID=rna7366|Name=rna7366|organism=Nannochloropsis gaditana|type=mRNA|length=3354bp|location=Sequence derived from alignment at CM002471.1:422032..425385- (Nannochloropsis gaditana)
TGCGATCACACTGCGCGATTTCTTTTTCCACGCGCCGCGCGCGTTTGATG
TCTGTACGTTTGCCCTGGCCCTTGGAGCTCGGCCGCTGTTGACCGTTCAT
TTCTCCTCCCGAGTCCTTGCCGAGCCCATCTCCCTCTCCCTGTCCGCCCT
TCCCAATCTTCCCCAAGCCTGGGCTCACCCCGCCTGGCGATGTCACCCAT
TCCAAAACTGACGTCCGACAATACGTCAACCACCATATGCAGCCCACATC
ACAGACATAGCAGCGAGAGCATTCCTTTGACGGGAAATAGGCTCCTGTTT
TTTGACCGGCGCCGAGATTCACTCTAGGCCACCCAATTCAACTGCACCGC
AAGCCGTGATACTCTGGGCTTTGTCCCGTTTCGACCATGACCGAATCCGA
CAAGGGCAGGGTTGGCAATCAATGTGGTCACCATGCCTCCGGCACATCAA
GAGGTCATAAGAGAATACGAAGGCTCGCTGGATTCTGCTGCCTCGCCTCG
TGCGTTCCCGTCAAAGCTTTTTTGGGTGCAGGCATGGGTGTAGGGCCGAT
GTCGACACCCGTTAGAGCTCAGACATTTCATCCTCTGACCTACCAATCAA
GGCATGATGGCGTCGCAAACTCCATTCTAAACGGTCGAACCAGACTACAA
GTAGCGCAGGTACGTTCTAGACGGCGCTCATGTCGCGGAGCAGTACATTG
AGAAATCCGACCTGAAAGGACGTGTCATGTCCCCATGCGTTTGCCAAGCT
CTTACTCGTTGTTCGTTGTTGAACGAGGATATTACTGATTGTTATCATTT
CATGAACTTCTTACCTTTTGTTAATTTGACTCTCTTCATTAGATCCCAGC
GCCCATGGATTGGAATGTGGCAGCATGGCCAGATCTCCCAATTGTAAACG
AGACAGCCATGAGTGGACGAAACAACGAGATGCGGGCTGGCTGGGCGAAA
CTGAGCCATATGGGAAGCACATTGACACGCCCTGCGCAGTCCTCATCTGG
AACTAAAGTAATTTTGAGCCCCTCTCCGAGCAAGAAATCGAGTGCCGACC
GTGCTGTCCGGCAGGTTGTAGCTCAGGGCAGACTCGGCAAAGCAGTGGAT
TTGCTGGTGTCACTTAGTGAGGAGGAGGACGGCCTTCATGCGATTGACCG
GGCTCTAGTCAACTTCGTTCTCTACAACTGCATGCGGCGCAGGGACTGGA
CACGTGCCCTGACCGTGCTGGACGCGCCCTTAATCGAGGTGGACGTGGTG
GGATTCACCATGGCCATCAAGGCCTGCGGCCAGGCGCGACGGTGGAGGGA
GGCTCTTGGCGTGCTGCGCGAAATGCAGGCGCGGGGTCTCCGCCCAGACT
TGGTTTCCTTTAACACAGCTATGGATGCTTTGGGGAAGGCGGGACAGTAC
GATCTCGCTCTCGAATTGTTCACCGAGATTGAAGACCACGGTTTTGCGCC
AAACCTGGTGTCTTACAACACTGCGATCCACGCTTGTGGGCGAGCTGGCA
TGGTAGACCGGGCCCACGAGCTCCTTCGAGAAATGCAAGGGCTGAGTGTG
CGCCCGGATTCTGTGTCATACAACACCGTTATGGCCGCATTTGCGAAGAA
GAATCAATGGAAGGCGGCGCTGGAACTGCTCGCAGAAATGAAGGAGGCAC
CTGGAGTCGATCCAGATCTGATTTCGTACAACACCGCCATGCACGTCTGT
GCGAAGGCGGGCAGGTGGGAGCGGGCTACGGAGCTTTTGACCGAGGCTTT
GGGCCAGGGGCTGCAGCCAGACGTGGTCTCATACAACACCGTTATGCACG
CCTGCGGGCGCGCAGGCGAGTACTTGCAAGCATTGGACCTTTTTGGGATG
ATGGAGGAGGTGGGAGTCGCCCCAGATCGCGTGAGCTTCAACACTGCGAT
GCACGCATGCAACCGGGCCCTGAAATGGCAGGCGGCACTGCAGATTCTAA
GAGAAATGGAGGCCCGAAGCATCGCCCCGAACGTGAAGAGCTACACCATC
GCTGTGGACGCCTGTGGACGCGCAGGGGAGTGGGAACGGGCCTTGGAGCT
GATGGAGGAGATGGAGGTTAGGGGTGTGCCGGCCAACGTGCACACGTACA
CGGCTGCCATGGACGCGTGCTGCCGGGGAGGCGCGGTGGATCGGGTGCTT
GTGCTTTTGGAGGAGATGGACGGAAAGGGGGTCGAGCCTAACGTGGTCTC
CTACACCATTGCTATGGACGCGATGAATCGAGTGGGCAAGTGGGATAGGG
CGTCCGCTGTATTGGAGCAAATGGTGCAACGTGGCCTTCGCTTAGACTCG
GTCTCCTATCGCACTGCCTTGAGCACGGCGGGTCGTGCCGGGGATGAGGA
AGGAGAGCGCCTGACAAAGATTGTGCACGAGTCGCGACAGCGTGGCCACG
CACGACAGCGCGGTGAGCGGAATGGACCCGGGGAAGGTGGGGAGAGCTCG
GACGGCGACCTGGCAGGGGGCTACGGTGAGCTTTTTCCAACCGGTAGCCG
ACAGTTTCGACAAACCCAGATTGGCAGCAGCACCCTCTGGGGCCTATAGC
GTGGTAAATGGTGACTAGTGTAGTTAAATGTTCACGACGACGGACACAAG
CAATTATGCTCTTTGTTGTCTCAAACTGGCAGTCTTTCCCGCTGCTTGGT
AGCAGAACTTTCAACAGAGGAGCACTCACGGGCGCAACCATAGTTGTTCC
GTCCCTCCTCCATCTCCTCGCTATTTGTTTCGAGTCTCAAACCGAGTTCT
TAGCGATTGTCGAAATATGGCGATTGACAAACACCGGCGGCACTTCGGTT
TCCGCGCAATTTCTGGGGTTTTTTGGTTAGGGTTACCCTAACCACAAATA
AAGCGGACAACTCGATCGCAAGCGATGTGTTGGAATAGATGGAACTTACG
TATAACGTTTATGTTACTGGCATCTTGAAAATACACGCGATGGAACACAT
AAGTAATTTTAGGATCGAATGCCATGATTTACCATGCGGAAATGGAGACA
TTCGAAGGATGAAATCCACTTGATATGGTGAGCGACAAGTGGAGGTAAAG
TGAGCCCATGCGCTTAGTTATCCCTTTTTCAGTTGAAGGTATTTGAGTAT
GAGCTGAGGTGTTTGGGGAACGCGCCGACCAAGTAATTGTAGAGATGAAG
TAAAGCTAGCTAACAGAGAACTCTAGCCCAGGAATCGCCCGAATTGATTT
TTTTCCTCTTGCTCATGCCAAGACTGGTTGATCACGTCGGCAGTGTGACA
CCACGGAAGGATCCATGACGTTCGAATCTGGACTCGTCAGCCTGTGAATA
AATTAAACAATGATTGGATCAACAAAGGCATATGAGGAAAGGAATGGCGT
ATCA back to topCoding sequence (CDS) from alignment at CM002471.1:422032..425385- >rna7366 ID=rna7366|Name=rna7366|organism=Nannochloropsis gaditana|type=CDS|length=3960bp|location=Sequence derived from alignment at CM002471.1:422032..425385- (Nannochloropsis gaditana)
ATCCCAGCGCCCATGGATTGGAATGTGGCAGCATGGCCAGATCTCCCAAT
TGTAAACGAGACAGCCATGAGTGGACGAAACAACGAGATGCGGGCTGGCT
GGGCGAAACTGAGCCATATGGGAAGCACATTGACACGCCCTGCGCAGTCC
TCATCTGGAACTAAAGTAATTTTGAGCCCCTCTCCGAGCAAGAAATCGAG
TGCCGACCGTGCTGTCCGGCAGGTTGTAGCTCAGGGCAGACTCGGCAAAG
CAGTGGATTTGCTGGTGTCACTTAGTGAGGAGGAGGACGGCCTTCATGCG
ATTGACCGGGCTCTAGTCAACTTCGTTCTCTACAACTGCATGCGGCGCAG
GGACTGGACACGTGCCCTGACCGTGCTGGACGCGCCCTTAATCGAGGTGG
ACGTGGTGGGATTCACCATGGCCATCAAGGCCTGCGGCCAGGCGCGACGG
TGGAGGGAGGCTCTTGGCGTGCTGCGCGAAATGCAGGCGCGGGGTCTCCG
CCCAGACTTGGTTTCCTTTAACACAGCTATGGATGCTTTGGGGAAGGCGG
GACAGTACGATCTCGCTCTCGAATTGTTCACCGAGATTGAAGACCACGGT
TTTGCGCCAAACCTGGTGTCTTACAACACTGCGATCCACGCTTGTGGGCG
AGCTGGCATGGTAGACCGGGCCCACGAGCTCCTTCGAGAAATGCAAGGGC
TGAGTGTGCGCCCGGATTCTGTGTCATACAACACCGTTATGGCCGCATTT
GCGAAGAAGAATCAATGGAAGGCGGCGCTGGAACTGCTCGCAGAAATGAA
GGAGGCACCTGGAGTCGATCCAGATCTGATTTCGTACAACACCGCCATGC
ACGTCTGTGCGAAGGCGGGCAGGTGGGAGCGGGCTACGGAGCTTTTGACC
GAGGCTTTGGGCCAGGGGCTGCAGCCAGACGTGGTCTCATACAACACCGT
TATGCACGCCTGCGGGCGCGCAGGCGAGTACTTGCAAGCATTGGACCTTT
TTGGGATGATGGAGGAGGTGGGAGTCGCCCCAGATCGCGTGAGCTTCAAC
ACTGCGATGCACGCATGCAACCGGGCCCTGAAATGGCAGGCGGCACTGCA
GATTCTAAGAGAAATGGAGGCCCGAAGCATCGCCCCGAACGTGAAGAGCT
ACACCATCGCTGTGGACGCCTGTGGACGCGCAGGGGAGTGGGAACGGGCC
TTGGAGCTGATGGAGGAGATGGAGGTTAGGGGTGTGCCGGCCAACGTGCA
CACGTACACGGCTGCCATGGACGCGTGCTGCCGGGGAGGCGCGGTGGATC
GGGTGCTTGTGCTTTTGGAGGAGATGGACGGAAAGGGGGTCGAGCCTAAC
GTGGTCTCCTACACCATTGCTATGGACGCGATGAATCGAGTGGGCAAGTG
GGATAGGGCGTCCGCTGTATTGGAGCAAATGGTGCAACGTGGCCTTCGCT
TAGACTCGGTCTCCTATCGCACTGCCTTGAGCACGGCGGGTCGTGCCGGG
GATGAGGAAGGAGAGCGCCTGACAAAGATTGTGCACGAGTCGCGACAGCG
TGGCCACGCACGACAGCGCGGTGAGCGGAATGGACCCGGGGAAGGTGGGG
AGAGCTCGGACGGCGACCTGGCAGGGGGCTACGGTGAGCTTTTTCCAACC
GGTAGCCGACAGTTTCGACAAACCCAGATTGGCAGCAGCACCCTCTGGGG
CCTATAGATGACCGAATCCGACAAGGGCAGGGTTGGCAATCAATGTGGTC
ACCATGCCTCCGGCACATCAAGAGGTCATAAGAGAATACGAAGGCTCGCT
GGATTCTGCTGCCTCGCCTCGTGCGTTCCCGTCAAAGCTTTTTTGGGTGC
AGGCATGGGTGTAGGGCCGATGTCGACACCCGTTAGAGCTCAGACATTTC
ATCCTCTGACCTACCAATCAAGGCATGATGGCGTCGCAAACTCCATTCTA
AACGGTCGAACCAGACTACAAGTAGCGCAGATCCCAGCGCCCATGGATTG
GAATGTGGCAGCATGGCCAGATCTCCCAATTGTAAACGAGACAGCCATGA
GTGGACGAAACAACGAGATGCGGGCTGGCTGGGCGAAACTGAGCCATATG
GGAAGCACATTGACACGCCCTGCGCAGTCCTCATCTGGAACTAAAGTAAT
TTTGAGCCCCTCTCCGAGCAAGAAATCGAGTGCCGACCGTGCTGTCCGGC
AGGTTGTAGCTCAGGGCAGACTCGGCAAAGCAGTGGATTTGCTGGTGTCA
CTTAGTGAGGAGGAGGACGGCCTTCATGCGATTGACCGGGCTCTAGTCAA
CTTCGTTCTCTACAACTGCATGCGGCGCAGGGACTGGACACGTGCCCTGA
CCGTGCTGGACGCGCCCTTAATCGAGGTGGACGTGGTGGGATTCACCATG
GCCATCAAGGCCTGCGGCCAGGCGCGACGGTGGAGGGAGGCTCTTGGCGT
GCTGCGCGAAATGCAGGCGCGGGGTCTCCGCCCAGACTTGGTTTCCTTTA
ACACAGCTATGGATGCTTTGGGGAAGGCGGGACAGTACGATCTCGCTCTC
GAATTGTTCACCGAGATTGAAGACCACGGTTTTGCGCCAAACCTGGTGTC
TTACAACACTGCGATCCACGCTTGTGGGCGAGCTGGCATGGTAGACCGGG
CCCACGAGCTCCTTCGAGAAATGCAAGGGCTGAGTGTGCGCCCGGATTCT
GTGTCATACAACACCGTTATGGCCGCATTTGCGAAGAAGAATCAATGGAA
GGCGGCGCTGGAACTGCTCGCAGAAATGAAGGAGGCACCTGGAGTCGATC
CAGATCTGATTTCGTACAACACCGCCATGCACGTCTGTGCGAAGGCGGGC
AGGTGGGAGCGGGCTACGGAGCTTTTGACCGAGGCTTTGGGCCAGGGGCT
GCAGCCAGACGTGGTCTCATACAACACCGTTATGCACGCCTGCGGGCGCG
CAGGCGAGTACTTGCAAGCATTGGACCTTTTTGGGATGATGGAGGAGGTG
GGAGTCGCCCCAGATCGCGTGAGCTTCAACACTGCGATGCACGCATGCAA
CCGGGCCCTGAAATGGCAGGCGGCACTGCAGATTCTAAGAGAAATGGAGG
CCCGAAGCATCGCCCCGAACGTGAAGAGCTACACCATCGCTGTGGACGCC
TGTGGACGCGCAGGGGAGTGGGAACGGGCCTTGGAGCTGATGGAGGAGAT
GGAGGTTAGGGGTGTGCCGGCCAACGTGCACACGTACACGGCTGCCATGG
ACGCGTGCTGCCGGGGAGGCGCGGTGGATCGGGTGCTTGTGCTTTTGGAG
GAGATGGACGGAAAGGGGGTCGAGCCTAACGTGGTCTCCTACACCATTGC
TATGGACGCGATGAATCGAGTGGGCAAGTGGGATAGGGCGTCCGCTGTAT
TGGAGCAAATGGTGCAACGTGGCCTTCGCTTAGACTCGGTCTCCTATCGC
ACTGCCTTGAGCACGGCGGGTCGTGCCGGGGATGAGGAAGGAGAGCGCCT
GACAAAGATTGTGCACGAGTCGCGACAGCGTGGCCACGCACGACAGCGCG
GTGAGCGGAATGGACCCGGGGAAGGTGGGGAGAGCTCGGACGGCGACCTG
GCAGGGGGCTACGGTGAGCTTTTTCCAACCGGTAGCCGACAGTTTCGACA
AACCCAGATTGGCAGCAGCACCCTCTGGGGCCTATAGATGACCGAATCCG
ACAAGGGCAGGGTTGGCAATCAATGTGGTCACCATGCCTCCGGCACATCA
AGAGGTCATAAGAGAATACGAAGGCTCGCTGGATTCTGCTGCCTCGCCTC
GTGCGTTCCCGTCAAAGCTTTTTTGGGTGCAGGCATGGGTGTAGGGCCGA
TGTCGACACCCGTTAGAGCTCAGACATTTCATCCTCTGACCTACCAATCA
AGGCATGATGGCGTCGCAAACTCCATTCTAAACGGTCGAACCAGACTACA
AGTAGCGCAG back to top
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