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Properties
| Property Name | Value |
|---|
| Product | Tautomerase |
| Orig transcript id | gnl|cribi|Naga_100053g19.5049.mrna |
| Orig protein id | gnl|cribi|Naga_100053g19.5049 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:420910..422495 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7364 ID=rna7364|Name=rna7364|organism=Nannochloropsis gaditana|type=mRNA|length=1657bp
TAGGGACGCATCATAATCTAAAAGCCATTGGATGGCTTGGTTGGGGAGTA
TCAAGGAGGTATCAAGGATCAGGGAACCCATCGTACAATGACTTCGACAG
TGTCGTGTTGTACCTGCTGATTGCTTGCTTTAGAATGGTGCACGAAGGCT
CATCGTGCGTTAGAACGTGTGCACGAAGTCGCACACCCTTTATCGCTGGC
TAAATGACTTAATTTTCGCCGGCACGTGCGGTCTCTCCTTGCAGCCTGTC
GCCTGATGCTTGAAGAGAATTCGTCTCGCCTTCACTGCAAAATGACTATG
AAGCTGATGCCCGAGATTCTGCGGACAATGCGGTGGTCTCCCAATGCGAC
GGCGACAAGACACATACATGCTGAGGCCCAGCATTACAGCACAGTTGCAC
GACTTTGACGGTGTCGTTTAGGATACTAGTTATGAGCAGAAATGGCATCG
TTTTGGCTACGGCCTTGCTTCCCCCCCCCCCAAGTCTACCCTTGCAGCAC
TCAATACCTCATTCCTTTCTGTTCTTATTGCCCAGCACATAGTCACGTAT
AAGCAGGATGGGCCGTTTGTCACTTGCTTGCTGTGTCTCAGCCCTTCTGG
CCTTGACAACATATGCGATGATTGAGCCGGCTACCAAGATCAAGTTTGAG
GAAACCATTTCTTTGCCAGGAAGCGTTGCCGGCCTTAGTCTTGCCGGTGT
GGGTGTGCGTGTGAAAAAGTTGGTCGGACCTTTAGCTGTCAAGGTCTACG
GCGTGGGTTTGTACGTTGACAAGGGCGTGGCGGTGAGAAAATTGAGCAAA
TTTAAGGGCCACAAAGCAGGATCCAAGGCACTATTCGATGCCCTGGAAAC
TGGAAATTTCGATAAAATTGTGCTCTTGAAGATGGCGCGAAAGGTGGGTG
CGGCGACCCTGGTCAATGCCTTGGCAGAAAGCGTGAAGCCTCGCCTCGGA
AAGGGCTCGGAAGCGGCGCTTCTGCAATTCCAAGATGTGCTTTTGGCAGG
CCTCAAGGGCGGCGAGGCCGAGACCGGCAAGCAGTTCGGCTTTGGTATTC
AGGGGGGCAGTAAATTGATCGTGACAATTAACGGAAAGAAACAGGGTGAG
ATAGCCAGCGGTCCTTTAGCTCAGGCACTGCTTAAAACTTACCTCGACAA
CAATGCCGTCTCTAAAGATATGAAGGAGTCGGTGGCCCAAGGGCTACTGA
CGTGGATCAATCTCGTGAAGTAAGACGTTTCAATCGACATCAAGATGGTT
CTGTCTCTCGGATAGGGAAAAAAAAACCTGAAAAGAGAGTAACAGAAGAA
GGAAAACTCAGCTTTCGGAACGCTTAGCTTTTGATAAGCTTCATTTTTAT
CCTGCGGCCTTTGTACACCTTCTAAACACAGCCGAAACGATTTTCACATC
CCTCGTCGAGCCCTTTCAGAGGGCAACAAAGGCGGAGGGCGGGAAACCCT
ATTAGGCATGGAGGTCCTAGACGGGGCAGTCGATGCTGTGGCCGGGGACT
CAGGGCTAGGGGCCGCATCCTTTACCCGCATCGGAGCAGGGATTTTGTGT
GTGGTCCTCGCTGCCGCCTCTACCTCTCTGAAAAAGGTTGGAGGGCCCCA
AGAGGTGACCTTATTGACGATCGCGGGGGGCGCGAAGCCCCCTGGGTCGA
CCTGCGT back to topprotein sequence of rna7364 >rna7364-protein ID=rna7364-protein|Name=rna7364|organism=Nannochloropsis gaditana|type=polypeptide|length=122bp
MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQ
FGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFV
SFEDVHKDFWGFNGQLFSTIFG back to topmRNA from alignment at CM002471.1:420910..422495+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7364 ID=rna7364|Name=rna7364|organism=Nannochloropsis gaditana|type=mRNA|length=1586bp|location=Sequence derived from alignment at CM002471.1:420910..422495+ (Nannochloropsis gaditana)
AAGTCGTGCAACTGTGCTGTAATGCTGGGCCTCAGCATGTATGTGTCTTG
TCGCCGTCGCATTGGGAGACCACCGCATTGTCCGCAGAATCTCGGGCATC
AGCTTCATAGTCATTTTGCAGTGAAGGCGAGACGAATTCTCTTCAAGCAT
CAGGCGACAGGCTGCAAGGAGAGACCGCACGTGCCGGCGAAAATTAAGTC
ATTTAGCCAGCGATAAAGGGTGTGCGACTTCGTGCACACGTTCTAACGCA
CGATGAGCCTTCGTGCACCATTCTAAAGCAAGCAATCAGCAGGTACAACA
CGACACTGTCGAAGTCATTGTACGATGGGTTCCCTGATCCTTGATACCTC
CTTGATACTCCCCAACCAAGCCATCCAATGGCTTTTAGATTATGATGCGT
CCCTACGAAGTGAGATCGTGTTGCACATTCTACTTATCGTCTATATATAA
CCTTTAGCATGGATTACCGACTGACTTGCCGGTTTGGATAACTCAACGTA
TAGCAAGCGAGTCAAGGGCACATGAAGAGGAGACACGAGAGCTTGCTGAC
ATGATGCGAGGATTTGCGATTTGTAACAATTTCTTCTGATCgattccttt
tcctttggcATATCGTACCCGTCGTCCACGGTCCAACCTGTCAGATCAAG
CTACTTGCTTGACAGATTTCACCATGCCTTTTGTCAATATTCGCACCTCT
GCTCAGTTGGATGCCTCGGGAGTCAAGGCTGTGACAGATGCTGCACACAA
CGCTATTCGTGACGTGCTCAATAAGCCTGACCAGTACATTGCAGTGGACG
TGACAGTGAGCCCAAACCTTCAATTTGGAGGAACTAAAGCACCTGCAGCA
ATGATAAGCGTCCACTCTATTGGTTATGGTGCCAACGCGAAGGCGAACAA
AGAAGCTCTTCTCAAGGCTCTGGGAACTGCTATGAAAGCTGCTGGAGACG
TTCCTGGTGACCGACTTTTTGTCTCCTTCGAAGACGTTCACAAAGATTTT
TGGGGGTTCAACGGACAACTCTTCTCTACAATTTTCGGTGAGAGAAACAA
CGCAACACAAAAGTTTGCATCAGAAACTTAGAAACAAAATTCATGGCGTC
AtcacccctcttcctcgacctgTGATACGCCATTCCTTTCCTCATATGCC
TTTGTTGATCCAATCATTGTTTAATTTATTCACAGGCTGACGAGTCCAGA
TTCGAACGTCATGGATCCTTCCGTGGTGTCACACTGCCGACGTGATCAAC
CAGTCTTGGCatgagcaagaggaaaaaaatcaatTCGGGCGATTCCTGGG
CTAGAGTTCTCTGTTAGCTAGCTTTACTTCATCTCTACAATTACTTGGTC
GGCGCGTTCCCCAAACACCTCAGCTCATACTCAAATACCTTCAACTGAAA
AAGGGATAACTAAGCGCATGGGCTCACTTTACCTCCACTTGTCGCTCACC
ATATCAAGTGGATTTCATCCTTCGAATGTCTCCATTTCCGCATGGTAAAT
CATGGCATTCGATCCTAAAATTACTTATGTGTTCCATCGCGTGTATTTTC
AAGATGCCAGTAACATAAACGTTATACGTAAGTTCC back to topCoding sequence (CDS) from alignment at CM002471.1:420910..422495+ >rna7364 ID=rna7364|Name=rna7364|organism=Nannochloropsis gaditana|type=CDS|length=738bp|location=Sequence derived from alignment at CM002471.1:420910..422495+ (Nannochloropsis gaditana)
ATGCCTTTTGTCAATATTCGCACCTCTGCTCAGTTGGATGCCTCGGGAGT
CAAGGCTGTGACAGATGCTGCACACAACGCTATTCGTGACGTGCTCAATA
AGCCTGACCAGTACATTGCAGTGGACGTGACAGTGAGCCCAAACCTTCAA
TTTGGAGGAACTAAAGCACCTGCAGCAATGATAAGCGTCCACTCTATTGG
TTATGGTGCCAACGCGAAGGCGAACAAAGAAGCTCTTCTCAAGGCTCTGG
GAACTGCTATGAAAGCTGCTGGAGACGTTCCTGGTGACCGACTTTTTGTC
TCCTTCGAAGACGTTCACAAAGATTTTTGGGGGTTCAACGGACAACTCTT
CTCTACAATTTTCGGCTGAATGCCTTTTGTCAATATTCGCACCTCTGCTC
AGTTGGATGCCTCGGGAGTCAAGGCTGTGACAGATGCTGCACACAACGCT
ATTCGTGACGTGCTCAATAAGCCTGACCAGTACATTGCAGTGGACGTGAC
AGTGAGCCCAAACCTTCAATTTGGAGGAACTAAAGCACCTGCAGCAATGA
TAAGCGTCCACTCTATTGGTTATGGTGCCAACGCGAAGGCGAACAAAGAA
GCTCTTCTCAAGGCTCTGGGAACTGCTATGAAAGCTGCTGGAGACGTTCC
TGGTGACCGACTTTTTGTCTCCTTCGAAGACGTTCACAAAGATTTTTGGG
GGTTCAACGGACAACTCTTCTCTACAATTTTCGGCTGA back to top
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