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Properties
| Property Name | Value |
|---|
| Product | calcium-dependent protein |
| Orig transcript id | gnl|cribi|Naga_100053g15.5075.mrna |
| Orig protein id | gnl|cribi|Naga_100053g15.5075 |
| Gene | CDPK |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:410425..413364 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7360 ID=rna7360|Name=rna7360|organism=Nannochloropsis gaditana|type=mRNA|length=1310bp
TCATCCAGGTCGGTCGTGTCGATGATCAGGCAACCTCGACGAGAGAGACG
CCACCGGGCGCTTGCTGGTGCCTACCCGGAGGACGCGCGACGTGAAACTT
TACCCACACTTTGTCTCTCATCACATTTTGACGGATATGCAGGGGAATGA
TGTTGAGACATTTGATGCTCACGGCCACTGTGGCAGCCTCCAATGCTGGG
TGTTCTTGTTTCTTCATGGGTTGGACAAGGCGGGCAGCTCCCGCGTCCTC
GTTGACGCGCTTTTTGACGCACAGTCGCCGTCCCAGCCCTCAGCCAGCCT
GCTCAGCAACGCTATCGAGCTCCAGTGCAAAGAGACAGGAAGCGAAGGGC
AAAATGTTCCCCGATGCGCTATCTCCAATAGAGCGCATGCAATTGCTGCG
CGCCCGAGCGCAACTTGAAGACGGGGACCTACCAGTTAGTAAAGCGGAAC
AGCATGCAAGCTCGGATCCACCGTCTTTTGTGAATCCGTCCGAGGTGCAC
CGCCACACAATACTAAATTGGGTACAAAGTATGGTAATCGATTTCAAACT
TTGTCCCTGGGCATCGCCTGCATTGAAAGCCAATGAATTAAAAATTGTCG
TGGCTCCGGTGTCGTCCAGCCTGCACGGGCTCTTGGAGAACGTGGTTGAA
GAAGCCTCACTTCTGGCAAGCATGTCGGAAAGACCTGAGGACCAGAACCT
GACGACGTTAATTGGAGTACCGGGGCCGTTGCTTAGTGATTTTCAGGACT
TTTTGGATTTGGTGGCCGTGGTGGACGAGTGTCTTGATGAACTTGACCTC
CGAGGAAAGGTTCAAGTGGCCTCTTTCCATCCCGACTTCGCTTTTGAAGA
CTCAACAGGGGATGATGTAGAGAATTTTACAAATCGAAGTCCATTACCAA
TTTTGCATTTATTGCGTGAGGTTGAGGTCTCTAGAGCTCTAGGAGGTTAC
CTCGGAGATCCAGCTTGCATATACGAACGCAATAAAATAACGATGAAGGA
GGCTGGTGCCGAGCAACTTCGAGCTGTGTTGACAGCCTGCCAAAGGATGA
ATTTCAAAGCATAAATCGGTGTGGATAAAAGGCTAGTATACTACCCGAAA
TAAATGAGACGGTCGTATCTTCTAGATTCAAAATGTATTTGACTTTTACT
ATGATAAGTGTCTCGATAGAGGTGTAATTGTCTCTCATTTGCACACATAA
GTACTGAGGAAACTCTGCTTTTTATTAGGTGTCGTGATAGTTCCCTCTTG
CTCCTCCGTATGCTCGCTCTTTCACCTCATTTTCGCCCCCAGGCCTAAAT
CATGATTTCG back to topprotein sequence of rna7360 >rna7360-protein ID=rna7360-protein|Name=rna7360|organism=Nannochloropsis gaditana|type=polypeptide|length=565bp
MGNAQGMVKSSATRQIADKQQERKPTVGRKAVNTDGKVVQIAAAAAVIDS
DHCNQPRSHQQQRTAIKVTSEASKPAAKGGAGGTSPGHKVTVASTSGSSG
YVTAGIRDIKSKYDIDPREIGHGHYGVVRKAKNRETGEAFAIKSIRKAKV
SRLDSLRREIDILQAVDHPQIIKLVDVYEDDKFLHLVTELCTGGEMFDRI
IAKTKSAEGHYSEKDAAVIMRKILDAIDYCHTVHNICHRDLKPENFLFKT
EDPSAELKIIDFGLSRFEDDQKYMTTRVGTPYYIAPEVLNRMYDKSCDLW
SIGVIMYILLCGYPPFYGDTDADIFASVRRAEFTFPSPEWDDISPSAKDL
IRKLLSKDPRKRPSAAAALNHEWFQVLKKDGEITQALTEHLRNSLRRFIG
MNKLKRVALTIIAEQVAEADVAHVQKAFEALDTNKDGVITVAELQQAAEQ
EGLTNVKEQVARLMHGVDVNENTAIDYNEFLAATMERSVYVRDEHIRRAF
QHFDQDMDGHITVQDLVEALGTEENAREVLGDIDRNGDGVISLDEFKNMM
EAAGSSSFSRHLDGK back to topmRNA from alignment at CM002471.1:410425..413364- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7360 ID=rna7360|Name=rna7360|organism=Nannochloropsis gaditana|type=mRNA|length=2940bp|location=Sequence derived from alignment at CM002471.1:410425..413364- (Nannochloropsis gaditana)
CCTAGTTGAATCTCCTTTTTAACAAATATTCTACCACTTCATGCTAATTT
GCACGGTATGCCATTGCAGAAGCAGGATGCACACAAATCCCCTCTCCAGC
AAAAGCGTTGCTCCTTCCTTCTCCGCAGTGTCTTACACCTAACACCGAAA
ATGCCTTAAATGCGTCTTTTAATTTTAATTGTCCTCGTAGTTCCTTCGCG
TGGTATTCATTCTAGCCATTAAATGCCTGAAAGGCTTGGCTTCGAGGGAA
TACTTGGTTGAAGGTAGAAAACGACAAGACAGACGTCATGCGTGTCATTT
TAAGGACGATGAGAACTATTCCGTAAAGCCACCTAGATTCAGTTTGTCTC
GTTCCTTTTTATAGCGTATCTACAGGGGCAATCCGTGCGAAAGGATGGGT
AATGCGCAAGGCATGGTCAAATCCTCTGCGACACGTCAAATGTGAGTTGC
ACGTAGTGCACTGTCGTCAGGATTGGAAGAAAATTTGCACGGATTTCCCC
TTTCGTAACCATTTCATATCGAGACTGTGATTTATTTCATTGTGGAAATC
ATCACGATCATACCCACGTGTGTATTGCCTTACTCTGACGTGATGATTTA
TTTACTAATATGGATTTTCTATTGAATTCTATAAGTGCGGATAAGCAACA
AGAGCGAAAGCCCACCGTAGGTCGCAAAGCCGTAAATACCGATGGAAAAG
TTGTTCAAATCGCTGCAGCAGCGGCTGTTATAGACAGTGACCACTGCAAT
CAACCGCGTTCGCACCAACAGCAGCGTACAGCTATCAAGGTCACCTCGGA
GGCATCCAAACCTGCCGCCAAAGGTGGAGCCGGAGGCACTAGTCCAGGAC
ACAAAGTCACAGTTGCGTCCACTTCGGGCTCGAGTGGCTATGTGACAGCA
GGAATCAGAGACATCAAGTCAAAGTACGATATAGACCCCCGAGAGATTGG
GCATGGCCACTATGGAGTTGTTCGCAAAGCAAAAAACCGAGAGACAGGGG
AAGCATTTGCCATCAAGTCTATCCGTAAGGCTAAAGTCAGTCGGCTTGAC
TCATTGCGCCGAGAGATTGACATTTTACAGGCAGTTGATCACCCGCAGAT
CATCAAGCTGGTGGACGTGTATGAAGATGACAAATTCTTACATTTAGTGA
CGGAGCTTTGCACAGGCGGCGAGATGTTTGATCGCATCATCGCAAAGACT
AAGTCGGCTGAAGGTCACTATTCTGAGAAAGACGCTGCCGTTATCATGCG
CAAGATTTTAGATGCCATTGATTACTGCCACACGGTGCATAATATCTGCC
ACCGTGACTTGAAGCCCGAAAACTTCCTCTTCAAAACCGAGGACCCCTCT
GCTGAACTGAAAATAATTGACTTCGGGCTTTCTCGCTTCGAGGACGACCA
AAAATACATGACCACTCGCGTGGGAACACCTTACTGTAAGTATTCCCATG
TGGGCGGCGGACTCGATTAGGCGTTACTGTCGTCTGTCGTCTGCTTTAAA
GTACCCGTATCATAGAATCGTCAATACTCCTTCCTGCTCTTTTACGTAGT
GAGAAATGACCCCCTTGTGGTAAATTCATACCCTTTTTTAGCCTTCTCCA
TTCTTTTCTTGCCATTCCTCTTTTTATGGACAGACATTGCACCTGAGGTG
TTAAATCGCATGTATGACAAGTCTTGCGATCTGTGGTCCATCGGCGTCAT
TATGTACATCCTGCTTTGTGGCTACCCTCCCTTCTACGGTGATACTGACG
CCGATATTTTCGCATCGGTGCGGCGCGCCGAGTTCACTTTTCCAAGCCCG
GAGTGGGACGACATTTCCCCCAGCGCCAAGGATCTCATCCGCAAATTGCT
GAGTAAAGACCCGCGAAAACGACCTTCGGCTGCCGCTGCTTTGAATCACG
AGTGGTTTCAGGTATTAAAAAAGGACGGAGAGATTACACAGGCCCTGACA
GAGCACCTTCGCAACAGCCTACGTCGGTTCATCGGCATGAATAAGCTCAA
GCGCGTTGCCCTGACGATCATCGCCGAGCAGGTGGCGGAGGCCGACGTGG
CGCACGTGCAGAAAGCCTTCGAGGCTCTGGACACGAATAAAGACGGCGTG
ATTACCGTGGCTGAGTTGCAGCAGGCGGCCGAGCAGGAGGGCCTTACTAA
TGTAAAGGAGCAGGTCGCGCGCCTCATGCACGGGGTGGACGTGAACGAGA
ACACCGCCATCGACTACAACGAGTTCCTCGCAGCGACGATGGAGCGCTCT
GTGTACGTGCGTGACGAACACATCCGGCGTGCCTTTCAGCATTTTGATCA
GGACATGGACGGACACATCACCGTGCAAGACCTGGTGGAGGCGCTCGGCA
CGGAGGAGAACGCGCGTGAGGTGCTTGGCGATATCGATCGCAACGGAGAT
GGCGTTATCAGCTTGGATGAGTTTAAAAACATGATGGAGGCGGCTGGCAG
CTCCTCTTTCTCGCGTCACCTCGACGGCAAGTAGAGGCGCTGCACAATCC
CAGCGGCCGCTTTCGCGCATTTATGCCCGGTAGTGTGCCTTGCCTATGGG
GTCGAAAGGACATCGACAGGCGCAATCATGATTTAGGCCTGGGGGCGAAA
ATGAGGTGAAAGAGCGAGCATACGGAGGAGCAAGAGTGTGCCTTGCCTAT
GGGGTCGAAAGGACATCGACAGGCGAAATCATGATTTAGGCCTGGGGGCG
AAAATGAGGTGAAAGAGCGAGCATACGGAGGAGCAAGAGGGAACTATCAC
GACACCTAATAAAAAGCAGAGTTTCCTCAGTACTTATGTGTGCAAATGAG
AGACAATTACACCTCTATCGAGACACTTATCATAGTAAAAGTCAAATACA
TTTTGAATCTAGAAGATACGACCGTCTCATTTATTTCGGGTAGTATACTA
GCCTTTTATCCACACCGATTTATGCTTTGAAATTCATCCT back to topCoding sequence (CDS) from alignment at CM002471.1:410425..413364- >rna7360 ID=rna7360|Name=rna7360|organism=Nannochloropsis gaditana|type=CDS|length=5094bp|location=Sequence derived from alignment at CM002471.1:410425..413364- (Nannochloropsis gaditana)
ACATTGCACCTGAGGTGTTAAATCGCATGTATGACAAGTCTTGCGATCTG
TGGTCCATCGGCGTCATTATGTACATCCTGCTTTGTGGCTACCCTCCCTT
CTACGGTGATACTGACGCCGATATTTTCGCATCGGTGCGGCGCGCCGAGT
TCACTTTTCCAAGCCCGGAGTGGGACGACATTTCCCCCAGCGCCAAGGAT
CTCATCCGCAAATTGCTGAGTAAAGACCCGCGAAAACGACCTTCGGCTGC
CGCTGCTTTGAATCACGAGTGGTTTCAGGTATTAAAAAAGGACGGAGAGA
TTACACAGGCCCTGACAGAGCACCTTCGCAACAGCCTACGTCGGTTCATC
GGCATGAATAAGCTCAAGCGCGTTGCCCTGACGATCATCGCCGAGCAGGT
GGCGGAGGCCGACGTGGCGCACGTGCAGAAAGCCTTCGAGGCTCTGGACA
CGAATAAAGACGGCGTGATTACCGTGGCTGAGTTGCAGCAGGCGGCCGAG
CAGGAGGGCCTTACTAATGTAAAGGAGCAGGTCGCGCGCCTCATGCACGG
GGTGGACGTGAACGAGAACACCGCCATCGACTACAACGAGTTCCTCGCAG
CGACGATGGAGCGCTCTGTGTACGTGCGTGACGAACACATCCGGCGTGCC
TTTCAGCATTTTGATCAGGACATGGACGGACACATCACCGTGCAAGACCT
GGTGGAGGCGCTCGGCACGGAGGAGAACGCGCGTGAGGTGCTTGGCGATA
TCGATCGCAACGGAGATGGCGTTATCAGCTTGGATGAGTTTAAAAACATG
ATGGAGGCGGCTGGCAGCTCCTCTTTCTCGCGTCACCTCGACGGCAAGTA
GTGCGGATAAGCAACAAGAGCGAAAGCCCACCGTAGGTCGCAAAGCCGTA
AATACCGATGGAAAAGTTGTTCAAATCGCTGCAGCAGCGGCTGTTATAGA
CAGTGACCACTGCAATCAACCGCGTTCGCACCAACAGCAGCGTACAGCTA
TCAAGGTCACCTCGGAGGCATCCAAACCTGCCGCCAAAGGTGGAGCCGGA
GGCACTAGTCCAGGACACAAAGTCACAGTTGCGTCCACTTCGGGCTCGAG
TGGCTATGTGACAGCAGGAATCAGAGACATCAAGTCAAAGTACGATATAG
ACCCCCGAGAGATTGGGCATGGCCACTATGGAGTTGTTCGCAAAGCAAAA
AACCGAGAGACAGGGGAAGCATTTGCCATCAAGTCTATCCGTAAGGCTAA
AGTCAGTCGGCTTGACTCATTGCGCCGAGAGATTGACATTTTACAGGCAG
TTGATCACCCGCAGATCATCAAGCTGGTGGACGTGTATGAAGATGACAAA
TTCTTACATTTAGTGACGGAGCTTTGCACAGGCGGCGAGATGTTTGATCG
CATCATCGCAAAGACTAAGTCGGCTGAAGGTCACTATTCTGAGAAAGACG
CTGCCGTTATCATGCGCAAGATTTTAGATGCCATTGATTACTGCCACACG
GTGCATAATATCTGCCACCGTGACTTGAAGCCCGAAAACTTCCTCTTCAA
AACCGAGGACCCCTCTGCTGAACTGAAAATAATTGACTTCGGGCTTTCTC
GCTTCGAGGACGACCAAAAATACATGACCACTCGCGTGGGAACACCTTAC
TATGGGTAATGCGCAAGGCATGGTCAAATCCTCTGCGACACGTCAAATAC
ATTGCACCTGAGGTGTTAAATCGCATGTATGACAAGTCTTGCGATCTGTG
GTCCATCGGCGTCATTATGTACATCCTGCTTTGTGGCTACCCTCCCTTCT
ACGGTGATACTGACGCCGATATTTTCGCATCGGTGCGGCGCGCCGAGTTC
ACTTTTCCAAGCCCGGAGTGGGACGACATTTCCCCCAGCGCCAAGGATCT
CATCCGCAAATTGCTGAGTAAAGACCCGCGAAAACGACCTTCGGCTGCCG
CTGCTTTGAATCACGAGTGGTTTCAGGTATTAAAAAAGGACGGAGAGATT
ACACAGGCCCTGACAGAGCACCTTCGCAACAGCCTACGTCGGTTCATCGG
CATGAATAAGCTCAAGCGCGTTGCCCTGACGATCATCGCCGAGCAGGTGG
CGGAGGCCGACGTGGCGCACGTGCAGAAAGCCTTCGAGGCTCTGGACACG
AATAAAGACGGCGTGATTACCGTGGCTGAGTTGCAGCAGGCGGCCGAGCA
GGAGGGCCTTACTAATGTAAAGGAGCAGGTCGCGCGCCTCATGCACGGGG
TGGACGTGAACGAGAACACCGCCATCGACTACAACGAGTTCCTCGCAGCG
ACGATGGAGCGCTCTGTGTACGTGCGTGACGAACACATCCGGCGTGCCTT
TCAGCATTTTGATCAGGACATGGACGGACACATCACCGTGCAAGACCTGG
TGGAGGCGCTCGGCACGGAGGAGAACGCGCGTGAGGTGCTTGGCGATATC
GATCGCAACGGAGATGGCGTTATCAGCTTGGATGAGTTTAAAAACATGAT
GGAGGCGGCTGGCAGCTCCTCTTTCTCGCGTCACCTCGACGGCAAGTAGT
GCGGATAAGCAACAAGAGCGAAAGCCCACCGTAGGTCGCAAAGCCGTAAA
TACCGATGGAAAAGTTGTTCAAATCGCTGCAGCAGCGGCTGTTATAGACA
GTGACCACTGCAATCAACCGCGTTCGCACCAACAGCAGCGTACAGCTATC
AAGGTCACCTCGGAGGCATCCAAACCTGCCGCCAAAGGTGGAGCCGGAGG
CACTAGTCCAGGACACAAAGTCACAGTTGCGTCCACTTCGGGCTCGAGTG
GCTATGTGACAGCAGGAATCAGAGACATCAAGTCAAAGTACGATATAGAC
CCCCGAGAGATTGGGCATGGCCACTATGGAGTTGTTCGCAAAGCAAAAAA
CCGAGAGACAGGGGAAGCATTTGCCATCAAGTCTATCCGTAAGGCTAAAG
TCAGTCGGCTTGACTCATTGCGCCGAGAGATTGACATTTTACAGGCAGTT
GATCACCCGCAGATCATCAAGCTGGTGGACGTGTATGAAGATGACAAATT
CTTACATTTAGTGACGGAGCTTTGCACAGGCGGCGAGATGTTTGATCGCA
TCATCGCAAAGACTAAGTCGGCTGAAGGTCACTATTCTGAGAAAGACGCT
GCCGTTATCATGCGCAAGATTTTAGATGCCATTGATTACTGCCACACGGT
GCATAATATCTGCCACCGTGACTTGAAGCCCGAAAACTTCCTCTTCAAAA
CCGAGGACCCCTCTGCTGAACTGAAAATAATTGACTTCGGGCTTTCTCGC
TTCGAGGACGACCAAAAATACATGACCACTCGCGTGGGAACACCTTACTA
TGGGTAATGCGCAAGGCATGGTCAAATCCTCTGCGACACGTCAAATACAT
TGCACCTGAGGTGTTAAATCGCATGTATGACAAGTCTTGCGATCTGTGGT
CCATCGGCGTCATTATGTACATCCTGCTTTGTGGCTACCCTCCCTTCTAC
GGTGATACTGACGCCGATATTTTCGCATCGGTGCGGCGCGCCGAGTTCAC
TTTTCCAAGCCCGGAGTGGGACGACATTTCCCCCAGCGCCAAGGATCTCA
TCCGCAAATTGCTGAGTAAAGACCCGCGAAAACGACCTTCGGCTGCCGCT
GCTTTGAATCACGAGTGGTTTCAGGTATTAAAAAAGGACGGAGAGATTAC
ACAGGCCCTGACAGAGCACCTTCGCAACAGCCTACGTCGGTTCATCGGCA
TGAATAAGCTCAAGCGCGTTGCCCTGACGATCATCGCCGAGCAGGTGGCG
GAGGCCGACGTGGCGCACGTGCAGAAAGCCTTCGAGGCTCTGGACACGAA
TAAAGACGGCGTGATTACCGTGGCTGAGTTGCAGCAGGCGGCCGAGCAGG
AGGGCCTTACTAATGTAAAGGAGCAGGTCGCGCGCCTCATGCACGGGGTG
GACGTGAACGAGAACACCGCCATCGACTACAACGAGTTCCTCGCAGCGAC
GATGGAGCGCTCTGTGTACGTGCGTGACGAACACATCCGGCGTGCCTTTC
AGCATTTTGATCAGGACATGGACGGACACATCACCGTGCAAGACCTGGTG
GAGGCGCTCGGCACGGAGGAGAACGCGCGTGAGGTGCTTGGCGATATCGA
TCGCAACGGAGATGGCGTTATCAGCTTGGATGAGTTTAAAAACATGATGG
AGGCGGCTGGCAGCTCCTCTTTCTCGCGTCACCTCGACGGCAAGTAGTGC
GGATAAGCAACAAGAGCGAAAGCCCACCGTAGGTCGCAAAGCCGTAAATA
CCGATGGAAAAGTTGTTCAAATCGCTGCAGCAGCGGCTGTTATAGACAGT
GACCACTGCAATCAACCGCGTTCGCACCAACAGCAGCGTACAGCTATCAA
GGTCACCTCGGAGGCATCCAAACCTGCCGCCAAAGGTGGAGCCGGAGGCA
CTAGTCCAGGACACAAAGTCACAGTTGCGTCCACTTCGGGCTCGAGTGGC
TATGTGACAGCAGGAATCAGAGACATCAAGTCAAAGTACGATATAGACCC
CCGAGAGATTGGGCATGGCCACTATGGAGTTGTTCGCAAAGCAAAAAACC
GAGAGACAGGGGAAGCATTTGCCATCAAGTCTATCCGTAAGGCTAAAGTC
AGTCGGCTTGACTCATTGCGCCGAGAGATTGACATTTTACAGGCAGTTGA
TCACCCGCAGATCATCAAGCTGGTGGACGTGTATGAAGATGACAAATTCT
TACATTTAGTGACGGAGCTTTGCACAGGCGGCGAGATGTTTGATCGCATC
ATCGCAAAGACTAAGTCGGCTGAAGGTCACTATTCTGAGAAAGACGCTGC
CGTTATCATGCGCAAGATTTTAGATGCCATTGATTACTGCCACACGGTGC
ATAATATCTGCCACCGTGACTTGAAGCCCGAAAACTTCCTCTTCAAAACC
GAGGACCCCTCTGCTGAACTGAAAATAATTGACTTCGGGCTTTCTCGCTT
CGAGGACGACCAAAAATACATGACCACTCGCGTGGGAACACCTTACTATG
GGTAATGCGCAAGGCATGGTCAAATCCTCTGCGACACGTCAAAT back to top
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