rna7356, rna7356 (mRNA) Nannochloropsis gaditana

Overview
Namerna7356
Unique Namerna7356
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length375
Alignment locationCM002471.1:403019..405315 -

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Properties
Property NameValue
Productstage iv sporulation protein fb
Orig transcript idgnl|cribi|Naga_100053g10.5043.mrna
Orig protein idgnl|cribi|Naga_100053g10.5043
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:403019..405315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100053g10gene7119Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7356rna7356-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23303.1cds7339Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7356 ID=rna7356|Name=rna7356|organism=Nannochloropsis gaditana|type=mRNA|length=375bp
ATGGAGGAAGGAGGGCGCTTGCGTGGGGCTTGGAGAGCTCCGGGGAAGCG
ACCGCCGCGCTTACGTGTCGATGGAGGATGGATTTCAGGGCAAAGAAGTG
CGAGAAAGAGTTCTGGAGGAACAATCAGTGTGGGAGAGGCTTGTACGGGG
AGGCTGCTCCCAGAAGATGTGTTCCGGACGCAAGGCTCCACAAGTAGAGG
GGGCCAAGTTGGCGACTTGTCAAGGCGAGGATCACACTGCTGTGAGTGGC
TTCGGACTGGGGTGAGCGGCTTGGTGAGGGAGAGAGAGGCTCGATGCGCG
ATCGTGGCAAAAAGGCGCGGGCAGGAGAAGAACGTTGCGGTTTTGTATAA
ACGAGGTGGACAGAGCAACACATAA
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protein sequence of rna7356

>rna7356-protein ID=rna7356-protein|Name=rna7356|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MNRNTGTGNNPAGVADNPFPNQWAWQIGAITLRGQRVPVKLHFLLPIFWV
LSLLSGLAYGGTYIGFRFIVDVLILFMTVFIHEMGHSLAAIQYSGKCHCI
TLWPLGGFAEVTHEKGPKEDLWVSFAGPLTHIPMCAIWYGIVAAVVKRPF
NIMAIPCDLLHSQACFWTNVAVSAGFLNMCLFLFNLFIPAYPLDASRILV
DFFALCNVEVNRAALITACISFPIGLALLGYGFWAFARGAANYTMTIFLA
IFILYSTWGVIKAARSGTAARHPMFIHYYRTSEPPVSATAASSSNAGTAS
STAGGQITSLWGSGLVGTSAAGTGVGGESTGGNVLSKMEAGKGHRLGGKP
VTSSTPAGNLAVGARTTSQSALLTGSSSSSAAAGSSTLGGASKGGYRLGS
K
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mRNA from alignment at CM002471.1:403019..405315-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7356 ID=rna7356|Name=rna7356|organism=Nannochloropsis gaditana|type=mRNA|length=2297bp|location=Sequence derived from alignment at CM002471.1:403019..405315- (Nannochloropsis gaditana)
CAAATGAATCATGTCATACAATGCTCGCTTTTCCCTTTCGACAAGACAGA
GAGGTTCCTCTCGAGTGCTTCAAAATATGACCTGGGAGGTTGGACCCGCA
TTGACCGTCTTGCCGACGTTCTCGATCCCGGCCCACGATGCATTCAATGC
TCCGCACTCATTTGCTTGTCCTTTCATTTTTTGAACTGGCGCGAGATGCT
CGGGTTGAGGTGATGTAGCAAATGGCTGCGATGGGAGGGGTCCGAAGGGA
CGCGAAAAGTCTTTAAAGAGCACCGTCATGCTAATTAGGCCCGTGACAGC
CCCCCCCTGACTGCTGTCTGCGACGCTACATGAAAGGCTTACAAGATAAT
TGCTGTCACTTGCGCGGCTATGCACAAGACACTCACTACCCTCGCTCGCT
TCTCTCTGTCTCCTGGGCACAGGTCCTGGTATTGCGCCCTCGTCTGGTCT
GCCTGACCGCCTTCCTTTTCTTCAATCCAGCGAGTTCGAGCCTTTTCATC
AGAGGAGCCTCTCAACAATGAATCGAAACACCGGAACGGGTAACAATCCT
GCTGGGGTGGCGGATAACCCTTTTCCCAATCAGTGGGCCTGGCAAATCGG
AGCAATCACTCTCAGGGGTCAACGCGTGCCCGTCAAGCTCCATTTTCTCC
TGCCCATTTTTTGGGTGTTGAGTTTACTCTCAGGCCTTGCCTACGGAGGC
ACGTACATTGGCTTTCGCTTCATCGTCGACGTTCTCATCCTGTTCATGAC
AGTCTTTATCCATGAGATGGGTCATAGCCTGGCTGCCATCCAGTACTCGG
GGAAGTGCCACTGCATCACGCTCTGGCCTCTGGGCGGCTTTGCCGAAGTC
ACGCACGAGAAAGGCCCAAAGGAGGACCTTTGGGTATCTTTTGCCGGACC
ACTTACCCACATCCCAATGTGCGCCATCTGGTATGGTATTGTGGCTGCAG
TAGTGAAAAGACCGTTCAACATCATGGGTAAGCAGAGCTTCAAATTTTGA
TGTGAAACATGGTCCCTCAACGTTCGCATTGAAGTGTCTGAGCCAACTTC
CTTGCATCCACACTCCAGTGTGCTGATTTCTCTCTTGACTGAAGCAGGTA
TATTAAGCCTTTTACATGTGTACACGCGTCTTCACTCATCTTTCTGTGTT
CCATTCCTCCCCAGCTATACCATGTGATCTCCTACACTCGCAAGCTTGCT
TCTGGACGAATGTGGCGGTGTCCGCTGGCTTTCTCAACATGTGCCTCTTC
CTCTTCAACTTATTCATTCCCGCCTACCCATTGGATGCTTCCCGCATCCT
CGTGGACTTCTTCGCGCTCTGCAACGTGGAGGTGAACCGCGCGGCCCTCA
TCACCGCCTGCATTTCCTTCCCCATTGGACTCGCGCTGCTTGGGTATGGA
TTCTGGGCTTTCGCCCGGGGGGCTGCCAACTACACTATGACCATATTCCT
GGCAATATTCATCCTCTACTCGACGTGGGGCGTCATCAAAGCCGCTCGCT
CAGGAACCGCGGCCAGGCACCCCATGTTCATCCACTACTACCGGACAAGC
GAGCCCCCTGTCTCCGCGACCGCAGCAAGCAGCAGCAATGCCGGGACAGC
CAGCTCCACAGCTGGTGGGCAGATCACATCTCTGTGGGGCTCTGGGCTTG
TGGGCACATCGGCCGCGGGGACGGGGGTGGGGGGAGAAAGCACCGGGGGG
AACGTCTTGTCGAAGATGGAGGCTGGTAAGGGCCATCGGCTCGGCGGGAA
GCCTGTTACCTCCTCTACGCCTGCAGGGAACCTGGCGGTAGGCGCGCGGA
CCACAAGCCAGTCTGCCCTGCTAACGGGCTCCTCGTCCTCGAGTGCAGCG
GCAGGATCCTCCACTTTGGGGGGGGCGAGCAAAGGAGGCTATCGCCTGGG
ATCCAAGTAAACTTGAATTTTTGAGACGGAAGGAAAGGGCAGCAAGTACA
GGTACCGACAGGCCGCAGCAAAAGAAACTTTGGACGTGTATATTACGGTC
GAAGGGCGCACTAAGCCAAGTATTAGCCTAGAGATCCGGACAGGAGCAAA
GTCACGAAAGAGAATGCGCAAACAGGAGGCATGAGCATAGGGACGTCGAA
CATACCTATTCTTGGGTTCTTTCCTTTATGTGTTGCTCTGTCCACCTCGT
TTATACAAAACCGCAACGTTCTTCTCCTGCCCGCGCCTTTTTGCCACGAT
CGCGCATCGAGCCTCTCTTCCAGCAGGGATAAACACACCCCTCTCCATCT
CCTCCCCAACCTCTCCCTCACCAAGCCGCTCACCCCAGTCCGAAGCC
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Coding sequence (CDS) from alignment at CM002471.1:403019..405315-

>rna7356 ID=rna7356|Name=rna7356|organism=Nannochloropsis gaditana|type=CDS|length=2412bp|location=Sequence derived from alignment at CM002471.1:403019..405315- (Nannochloropsis gaditana)
CTATACCATGTGATCTCCTACACTCGCAAGCTTGCTTCTGGACGAATGTG
GCGGTGTCCGCTGGCTTTCTCAACATGTGCCTCTTCCTCTTCAACTTATT
CATTCCCGCCTACCCATTGGATGCTTCCCGCATCCTCGTGGACTTCTTCG
CGCTCTGCAACGTGGAGGTGAACCGCGCGGCCCTCATCACCGCCTGCATT
TCCTTCCCCATTGGACTCGCGCTGCTTGGGTATGGATTCTGGGCTTTCGC
CCGGGGGGCTGCCAACTACACTATGACCATATTCCTGGCAATATTCATCC
TCTACTCGACGTGGGGCGTCATCAAAGCCGCTCGCTCAGGAACCGCGGCC
AGGCACCCCATGTTCATCCACTACTACCGGACAAGCGAGCCCCCTGTCTC
CGCGACCGCAGCAAGCAGCAGCAATGCCGGGACAGCCAGCTCCACAGCTG
GTGGGCAGATCACATCTCTGTGGGGCTCTGGGCTTGTGGGCACATCGGCC
GCGGGGACGGGGGTGGGGGGAGAAAGCACCGGGGGGAACGTCTTGTCGAA
GATGGAGGCTGGTAAGGGCCATCGGCTCGGCGGGAAGCCTGTTACCTCCT
CTACGCCTGCAGGGAACCTGGCGGTAGGCGCGCGGACCACAAGCCAGTCT
GCCCTGCTAACGGGCTCCTCGTCCTCGAGTGCAGCGGCAGGATCCTCCAC
TTTGGGGGGGGCGAGCAAAGGAGGCTATCGCCTGGGATCCAAGTAAATGA
ATCGAAACACCGGAACGGGTAACAATCCTGCTGGGGTGGCGGATAACCCT
TTTCCCAATCAGTGGGCCTGGCAAATCGGAGCAATCACTCTCAGGGGTCA
ACGCGTGCCCGTCAAGCTCCATTTTCTCCTGCCCATTTTTTGGGTGTTGA
GTTTACTCTCAGGCCTTGCCTACGGAGGCACGTACATTGGCTTTCGCTTC
ATCGTCGACGTTCTCATCCTGTTCATGACAGTCTTTATCCATGAGATGGG
TCATAGCCTGGCTGCCATCCAGTACTCGGGGAAGTGCCACTGCATCACGC
TCTGGCCTCTGGGCGGCTTTGCCGAAGTCACGCACGAGAAAGGCCCAAAG
GAGGACCTTTGGGTATCTTTTGCCGGACCACTTACCCACATCCCAATGTG
CGCCATCTGGTATGGTATTGTGGCTGCAGTAGTGAAAAGACCGTTCAACA
TCATGGCTATACCATGTGATCTCCTACACTCGCAAGCTTGCTTCTGGACG
AATGTGGCGGTGTCCGCTGGCTTTCTCAACATGTGCCTCTTCCTCTTCAA
CTTATTCATTCCCGCCTACCCATTGGATGCTTCCCGCATCCTCGTGGACT
TCTTCGCGCTCTGCAACGTGGAGGTGAACCGCGCGGCCCTCATCACCGCC
TGCATTTCCTTCCCCATTGGACTCGCGCTGCTTGGGTATGGATTCTGGGC
TTTCGCCCGGGGGGCTGCCAACTACACTATGACCATATTCCTGGCAATAT
TCATCCTCTACTCGACGTGGGGCGTCATCAAAGCCGCTCGCTCAGGAACC
GCGGCCAGGCACCCCATGTTCATCCACTACTACCGGACAAGCGAGCCCCC
TGTCTCCGCGACCGCAGCAAGCAGCAGCAATGCCGGGACAGCCAGCTCCA
CAGCTGGTGGGCAGATCACATCTCTGTGGGGCTCTGGGCTTGTGGGCACA
TCGGCCGCGGGGACGGGGGTGGGGGGAGAAAGCACCGGGGGGAACGTCTT
GTCGAAGATGGAGGCTGGTAAGGGCCATCGGCTCGGCGGGAAGCCTGTTA
CCTCCTCTACGCCTGCAGGGAACCTGGCGGTAGGCGCGCGGACCACAAGC
CAGTCTGCCCTGCTAACGGGCTCCTCGTCCTCGAGTGCAGCGGCAGGATC
CTCCACTTTGGGGGGGGCGAGCAAAGGAGGCTATCGCCTGGGATCCAAGT
AAATGAATCGAAACACCGGAACGGGTAACAATCCTGCTGGGGTGGCGGAT
AACCCTTTTCCCAATCAGTGGGCCTGGCAAATCGGAGCAATCACTCTCAG
GGGTCAACGCGTGCCCGTCAAGCTCCATTTTCTCCTGCCCATTTTTTGGG
TGTTGAGTTTACTCTCAGGCCTTGCCTACGGAGGCACGTACATTGGCTTT
CGCTTCATCGTCGACGTTCTCATCCTGTTCATGACAGTCTTTATCCATGA
GATGGGTCATAGCCTGGCTGCCATCCAGTACTCGGGGAAGTGCCACTGCA
TCACGCTCTGGCCTCTGGGCGGCTTTGCCGAAGTCACGCACGAGAAAGGC
CCAAAGGAGGACCTTTGGGTATCTTTTGCCGGACCACTTACCCACATCCC
AATGTGCGCCATCTGGTATGGTATTGTGGCTGCAGTAGTGAAAAGACCGT
TCAACATCATGG
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Synonyms
Publications