rna7353, rna7353 (mRNA) Nannochloropsis gaditana

Overview
Namerna7353
Unique Namerna7353
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1005
Alignment locationCM002471.1:398823..399928 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100053g7.5076.mrna
Orig protein idgnl|cribi|Naga_100053g7.5076
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:398823..399928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100053g7gene7116Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23336.1cds7336Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7353rna7353-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7353 ID=rna7353|Name=rna7353|organism=Nannochloropsis gaditana|type=mRNA|length=1005bp
AGAGATAGGGTTTAAAAAGAGTCTGAGAATGATGGCGTTGATGGTTTGTC
CTGAACGTTGTTCTCGCGCCGCACAAGCGCGTCACACGGGGCAGGCACCG
GCTTCTCTCTCGCCCCCCTTCCGCTCACGCTCATTGGTATCAGCGTTCTC
GCTTCTCACCGCAGACGCAATTTAGTCCGGGCACGCGGACGACGCGCCTT
CATCAGTCTAGAAAAATCCACGAACATCTTCGACCAGTCAAGTGATGAAC
CCACTGCAGCACAGTATTACGGAGCGAACTACCACATCAGACAAAGCAGA
TGCCGCATTCGAAAATCACATAAATGCTTTCTTGGCAAAAAAGGCCGGTG
TTCTTAATTTAGCGCACATAGATATCGGTGAGAAACTTCCCGAACGGGCG
AAGAGGATGGCAGGTGTGGCTACGTCCGTGTACTTCGAACCCTACTTTGC
CGCAACAAGCTCTGGCGTAGGCAGCCTGGCAGCCCGCGCCAATAGCATCG
ATGCCGGCCTCGCGTACTGCAAGAAAGTCAAAGAGGCGACAGCATCCTCG
GTGAAAGTTGAAAAATGAGGATTTCATCCAGATCATGAAGGAGATGGAAA
TGTAAAAAAGGAATTGAATGGAGGAAGGGCTCTTGTCATGTGCATGTGTG
TGACATAAGAGGGCGTGAGACGTACAAGGTTACTACTACTTTGTGCATGT
GTGTGACATAAGAGGACGTGAGACGCACAAGGTTACTACTACTTTGTCCA
TTTTTGGCTCCGCGATAGGCGTGAAGTGATCCCTGCCAAAACTAAAGAAC
AAGATCAATCATTCATACAAAGTAAGCCTTCTTGTAATAATGGGTAGTGT
GTCAACGATGCGTCGTCTTTAGGCTACGTTCCTAAGCCGTTCGGCGAGAG
GAGGGATCACCCCTAGTAGACGATGGGAAGTCTCCCTGTCTAATGGACTG
AGTGACACGTATGCGGTGATCTCATCTCAAAAGAAAACCCGACAAGGAGC
AGTGA
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protein sequence of rna7353

>rna7353-protein ID=rna7353-protein|Name=rna7353|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
MLRVEGSILETKRTGDLRLSPHFGFVELWDRVRVTGFAGAGRSSAGQVEK
CEMEVKGGRTPPSPRGITRRLRPQSWTSRSHLRWRRGGRAKTRGNSGPRS
STWRAGRAGGPWRHAGRPRRREDANKWGKGGGSDGSDWSLERGRSTWG
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mRNA from alignment at CM002471.1:398823..399928-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7353 ID=rna7353|Name=rna7353|organism=Nannochloropsis gaditana|type=mRNA|length=1106bp|location=Sequence derived from alignment at CM002471.1:398823..399928- (Nannochloropsis gaditana)
GCGTAAATCATTCTGGTGGACACCTGGCAAATGCGCTTGTAGTATCTGGA
ACGATATGTGCGTCACAAGCGGACTCGAAAACGCCACATTGGTAGCATGC
ACATGATGGGATCGGACGCGGCTTTAGCCTCTCAGACCTTACTTATTACG
CGCATACCTGAATCCTGGACCCGAATATCTCATCAGCTCAGCTCAAGGAG
GTGCAGGGCGCAGGTGGTCGTAGCCGCAACGGAGTAGGAGGAGGCAGAGG
CTTGAGGTACGTGAAGCGATTACCGATGATGGATGCTGCGCGTTGAAGGC
AGTATCCTGGAGACCAAACGGACGGGTGATTTACGCCTAAGCCCGCATTT
CGGCTTTGTGGAGCTCTGGGATCGCGTGAGGGTCACGGGCTTTGCAGGCG
CGGGTCGGAGCTCGGCAGGCCAGGTAGAGAAATGCGAAATGGAGGTAAAG
GGGGGCAGAACACCTCCTTCCCCCCGGGGCATTACTCGGCGCCTGAGGCC
TCAGTCATGGACTTCAAGGTCCCACCTGCGGTGGAGGCGTGGCGGGAGGG
CGAAAACTCGTGGCAATTCCGGCCCAAGGTCTTCAACGTGGCGGGCGGGG
CGGGCAGGGGGGCCTTGGAGGCATGCTGGGAGGCCTCGGAGGCGGGAGGA
TGCGAACAAATGGGGGAAGGGAGGAGGCTCGGATGGTAGTGACTGGTCGC
TGGAGAGAGGAAGATCGACCTGGGGGTAGGTGACGGCGAGGGAAGAGGGA
GTGGTCCGGCGTAGAGGCGTGGCCGAGAACCCAAGGAAAGCTCTGGCTTG
CATGGAAGCGGAGGAGAAAATAGTACGAGTTTTTTGAAATGGACGCGCTC
GCGCACAAGAACAGGCGCTTCGCGAAGTGGGAGGGGCGGCGGATGGAAGA
CGAAGGGGACGGGACGTAACAACCTCACGGTGGCTGGATCAGGCTTTGCG
CATTAATTTCTAGCAGCGCTCGAACAAATGCGGCGGAAGAATTTCAAGAA
CAATGCTTCTACAGAAGGGAGTCCGGGGCAATGAGAAATGAGGTTGAAAA
GCGGACAGACAACGTTGAACGTATCCGAGAAATACACGCCCGACACATGA
CGGTCT
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Coding sequence (CDS) from alignment at CM002471.1:398823..399928-

>rna7353 ID=rna7353|Name=rna7353|organism=Nannochloropsis gaditana|type=CDS|length=447bp|location=Sequence derived from alignment at CM002471.1:398823..399928- (Nannochloropsis gaditana)
ATGCTGCGCGTTGAAGGCAGTATCCTGGAGACCAAACGGACGGGTGATTT
ACGCCTAAGCCCGCATTTCGGCTTTGTGGAGCTCTGGGATCGCGTGAGGG
TCACGGGCTTTGCAGGCGCGGGTCGGAGCTCGGCAGGCCAGGTAGAGAAA
TGCGAAATGGAGGTAAAGGGGGGCAGAACACCTCCTTCCCCCCGGGGCAT
TACTCGGCGCCTGAGGCCTCAGTCATGGACTTCAAGGTCCCACCTGCGGT
GGAGGCGTGGCGGGAGGGCGAAAACTCGTGGCAATTCCGGCCCAAGGTCT
TCAACGTGGCGGGCGGGGCGGGCAGGGGGGCCTTGGAGGCATGCTGGGAG
GCCTCGGAGGCGGGAGGATGCGAACAAATGGGGGAAGGGAGGAGGCTCGG
ATGGTAGTGACTGGTCGCTGGAGAGAGGAAGATCGACCTGGGGGTAG
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Synonyms
Publications