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Properties
| Property Name | Value |
|---|
| Product | epoxide hydrolase 4 |
| Orig transcript id | gnl|cribi|Naga_100510g6.4380.mrna |
| Orig protein id | gnl|cribi|Naga_100510g6.4380 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:285696..287754 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna735 ID=rna735|Name=rna735|organism=Nannochloropsis gaditana|type=mRNA|length=2227bp
AAAGGACAAGTATTAGTACGGACAAAGGACGCGTTGCGACCGTAAAAAAC
GAGGAAAGATATAGTACCAAGCATAGTAGACGCCTGTCGCTGTCCCTGTG
CATAAAACACCACTCTTTTTCAAAAGCGGGGGGTATAAGGACGGGAAAGC
GATCGGAAAGCGAGTCAAGGGCCATGTGGGGGGGCGACTCCAAGAAAAAG
CAAGTTGAAGTTTTGGGAAACGTCCTTCTCTTCTGGTGTTGACAGGAAAA
AGGCCATGCAAGAAGACGAACAAACGTTGAATTTTGCCACATGCGTGTCG
TATGATTCTATTCGGTATGGTAGGGTGGTGTAGGCTTGCAGGGACACAGA
GTTTATGCAGCCGTGCCTTGGCGTGTGATCCTTGTTTGCCTTCCTGATGA
GTCGTAGCTGGTATAGATTTCTCGCTTACTCCATTGGAAAATACATGCAC
GCCATTGCTATTTGTAAAACCCGTTGGCCGTCTTGTTTGTCTTTATAAGT
CCCTTTTCTGTGTTACCCATTTTTTCTTGTGTCGACCTGTGCATCTTGCG
TGTCGAATCAAAGGACAGGCATGTCATTTTTGGTGCTGGTCCACCTTTGT
GCGAGATCGGACCTCCTACCCAACTGTTCTTGACTCCGATCCCGCCATCA
CTGAGCTTTGCCGATCTGCTCGAAATTAAAGCATCCTTAATACTTACATG
TGGACTTTCATCAGTGAGAGGTGTTTATGCTAAAAATACTACTGACTAGA
CAGCACGCAGTACCCATGCCTTACAAATTGATCGAAACTATCTCACATTA
CATGTCCATGAAATAGCCGTTCCCCTTTCGTAAAGGTCGACGTCCTTTCC
AACAATGCTTTCCTTGTCAGTCATGGTTCTAGAGGCTCTTGCCCTCTTTT
TCACGGCCGTCACCGCGATCTCAACATACTACTTCAGCTTCAGGACAAAC
CTGACGTTTCCCTCTCAGCAGTCTCAAATCACCTACTACTCGGTATACCA
GACGTGCGCCACCAGCACGCTTTTCGGAGACCGTGTCTTCGCGGCTGCCA
ATGGGATGTGCGCCGCCGTTTGGTTCGTTGAGGCGTTTTTGATCATGGCG
CTCGTCACTGCCTGCTTTGGCTACGTGCTGCACATCATGTCCGACAAACG
GGCCCTGCTGCCGTCGGGAAAACGTGCCTGGTCCGTCATGTGGCAACAGC
ACTTATGGAGCGCCCTTTTCCTCATTCTGGGCCTGGGGACTGCTGGCGGT
GTCTTCCGCAACCTGCGAATTCTTTTGCTCCGAAACATTCCTGTCGGTCA
AAGCGCCCAGCTCCGTTTCTCCTGGGGCTTTGCGACGCACATCGTCGCGA
CCGTCCTCCACATCATCCTCACCTTGATCCTGGTCATCTTCCGCCCGGAC
GAGGGCCCCATCCAGCAAGGCATGTACACGGACGAGAACTACTCGCAGCC
CATGACTCCACGGAGCGGGATGCACCCGATGACGCCCAAAAGCTTCGCCG
GGCCCATGACCCCCCCGGCAGCAGATGATGCACCAACAGATGCAGTCGCA
GCATTTTGACACGGAAGAGGAGGAATGAGCGTCCCTGACTACGGAGTGAT
TGTCATGTATAGCATGTATAAGAGCGTTCTGGATGCATGAGTCGCGCGGT
GCATGAGTCTTGTGCAGCCACGGCGTCGCGGAGTCGCGGTGCCAACGGGG
AGTTTTCGACCTTCGAGTGTATGAGGGAGTATCGACACGATAAAGAGGAA
GCGAGGGATGCGGCCCTGTCGAGCATCATAAGGAGAAGGGGGGGTGGGGG
CGTGTGCATGCCAAAGCGGAGAAAGAATCATTCGGTATCTTGCTTCGAGA
AAACCATGCGAAAGGGAACGTTTATTTGGGAGAGTCTTCCCGACGGCGTG
CATTACAGACGTCCTCTCGCATAACCAAGCCAGGACGTGTCCTTGCCTAG
ACCACGCGTGTGCTTGCGTTGTTGTATCACCTCCTGAATGGGGCCAGTGC
CAGGGGAAGACGAGAAGGATTGTAGCCAAAGGAAAAACGGGCCTGGGCCC
CCTAAGGCATAGCACGGCCGACACGAGTGTGTCCGCGACCAATCCCCGAT
ATTCTTTGCTTAGAGTGCCTTGTCTTACTGTAATGAATGTCTACCCACCA
AAGCAATGCGGTTAAAAGCCTCCCGAAGAGCGGCGCCTTGCCTCTGTACA
TGCACCAGTCATTCGACCCCCCTTCCC back to topprotein sequence of rna735 >rna735-protein ID=rna735-protein|Name=rna735|organism=Nannochloropsis gaditana|type=polypeptide|length=394bp
MPPVTAPHNPSTPSSPSNFSFKASRPSLPRSLQRVLAKLLTHPLVVPLIS
YAYAAPFLILWARVRLASFLKGKKMLAPIAPTDDVAAALLNKEYGAHKYL
EANGLRFHYVEAGHPSSTSPLVLFLHGFPEFWYSWRHQLQFLGSRGFHAV
ALDMRGYGWTDKPEEIASYNLEELVQDVSAVIDCLGYGPREDGTPGGGCL
LIGHDWGGLVAWAAAHVLGPRWVRGLCVMNCPHPTAFMTQAGLSQFFKSW
YFYFFQVPFLPETMLGAGEWTWIGASFRGKRMGLQRPDARMTDTDLLVMK
HGFSQPGVARAAVNYYRANMFRRKEETMEEALAGRVPVPVLVIWGQQDKA
LEEILVDGTENHVAHGDKGGGKEGCAWSRSRTPAIGCRWMLLQK back to topmRNA from alignment at CM002456.1:285696..287754+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna735 ID=rna735|Name=rna735|organism=Nannochloropsis gaditana|type=mRNA|length=2059bp|location=Sequence derived from alignment at CM002456.1:285696..287754+ (Nannochloropsis gaditana)
ACAGGCGTCTACTATGCTTGGTACTATATCTTTCCTCGTTTTTTACGGTC
GCAACGCGTCCTTTGTCCGTACTAATACTTGTCCTTTAcgctccgtctcc
ttcccctcccatttCGCCATCAAGACGTGAAAGACCCGATGCCACCTGTT
ACGGCGCCGCACAATCCCTCCACaccttcgtctccctccaaTTTTTCTTT
CAAGGCTAGCCGTCCTAGCCTTCCTCGATCCCTGCAGCGCGTCTTGGCCA
AGTTGCTCACACATCCTCTTGTGGTTCCACTGATATCTTACGCGTATGCC
GCGCCTTTCTTAATTCTATGGGCCAGAGTGCGTCTAGCGTCATTTttaaa
agggaaaaaaatgcttgCTCCCATTGCACCAACGGACGATGTGGCTGCAG
CGCTGTTGAACAAGGAATACGGGGCACACAAATATCTGGAAGCGAATGGG
TTGCGTTTCCACTACGTAGAAGCGGGGCATCCCTCGAGTACCTCCCCGTT
GGTCTTATTCTTGCACGGTAAGTTGTCCCGGAAAGGAGCAAGCTATGTAG
GTCCGGGTAAAAAAGTGCGTCGAAAGGAGCTAGTGAGCTGGCGTTTCCGC
CCGGATGAACATGGAAACACCGACAAGTCCACTTCAACCACGTTCAtatc
ctccccccgcccttcttttgTCTGCGCAACTCTCCTGTATTCCCTTGCCT
ATCGTGTCCTCGGCCACtgcgcctccattccccgcCGTCACCCTTAGTCC
CCCGCACCACTATGCCCCCCGTCCATGGATCGTACAGGCTTCCCGGAGTT
TTGGTACTCTTGGCGCCACCAGCTTCAATTTCTAGGGAGCCGTGGCTTTC
ATGCAGTAGCTTTGGATATGCGGGGATACGGCTGGACAGACAAACCGGAG
GGTAGGacggcagggaagaggaagggagggggaggagccttATTATGCAG
CGTcgagtggaggaaaaggggtgAGGGTGGATGGTCAAGGCAAAGATGAG
TTCGCCGGAGATGCATGAAAAACGCGCAAACGAGCGGGCATCTTTGGGCA
CATTCGGTTCACATTATGTGAAAACATTTCAAATCAcaacccctcctctt
cctccctccttccctccctccctccctccctccctccctccccagaaATC
GCTTCCTACAACCTGGAGGAGCTAGTGCAGGACGTGTCCGCCGTCATCGA
CTGCCTGGGATACGGTCCCCGGGAGGACGGCACCCCGGGCGGCGGTTGCC
TCCTGATCGGGCATGACTGGGGGGGGCTGGTGGCGTGGGCGGCGGCCCAT
GTCTTGGGCCCGCGCTGGGTCCGAGGTCTCTGCGTCATGAACTGCCCGCA
CCCGACTGCCTTTATGACGCAGGCGGGACTCAGCCAATTTTTCAAGTCTT
GGTATTTCTATTGTGcgtgcaaggaagggagggagggggggactTGCAGG
CACCCTGAGCAGCCTCTCTCTGACCTATCGCCATCAAGCCCTTTGATCTT
GCCCTTGGCCGACGGGTCCGCGTTGTGGGGTTGGCTGGTATTAACGCCAC
CGACACTCtctcattccttcccccgccctccctcccgccctccccagtTT
TCCAGGTCCCCTTCTTACCAGAGACCATGCTGGGCGCCGGGGAGTGGACC
TGGATCGGCGCGTCTTTTCGAGGCAAACGCATGGGGCTCCAACGTCCCGA
CGCCCGCATGACGGACACTGACTTATTGGTCATGAAACACGGCTTCTCCC
AGCCCGGCGTGGCCCGAGCCGCCGTGAACTACTACCGGGCCAACATGttc
cggaggaaggaggagacgatggaggaggcattGGCTGGGCGGGTGCCGGT
GCCCGTGCTGGTGATATGGGGCCAACAAGacaaggccttggaggagatcC
TCGTGGACGGAACGGAGAACCACGTGGCGCACGGCgacaagggcgggggg
aaggagggctgcgCGTGGTCAAGATCCCGGACGCCAGCCATTGGGTGCAG
GTGGATGCTCCTGCAGAAGTGAACGACCTCCTGTGCCGGTTTGCGCGCCA
AGTGCGGGG back to topCoding sequence (CDS) from alignment at CM002456.1:285696..287754+ >rna735 ID=rna735|Name=rna735|organism=Nannochloropsis gaditana|type=CDS|length=4740bp|location=Sequence derived from alignment at CM002456.1:285696..287754+ (Nannochloropsis gaditana)
ATGCCACCTGTTACGGCGCCGCACAATCCCTCCACaccttcgtctccctc
caaTTTTTCTTTCAAGGCTAGCCGTCCTAGCCTTCCTCGATCCCTGCAGC
GCGTCTTGGCCAAGTTGCTCACACATCCTCTTGTGGTTCCACTGATATCT
TACGCGTATGCCGCGCCTTTCTTAATTCTATGGGCCAGAGTGCGTCTAGC
GTCATTTttaaaagggaaaaaaatgcttgCTCCCATTGCACCAACGGACG
ATGTGGCTGCAGCGCTGTTGAACAAGGAATACGGGGCACACAAATATCTG
GAAGCGAATGGGTTGCGTTTCCACTACGTAGAAGCGGGGCATCCCTCGAG
TACCTCCCCGTTGGTCTTATTCTTGCACGGCTTCCCGGAGTTTTGGTACT
CTTGGCGCCACCAGCTTCAATTTCTAGGGAGCCGTGGCTTTCATGCAGTA
GCTTTGGATATGCGGGGATACGGCTGGACAGACAAACCGGAGGaaATCGC
TTCCTACAACCTGGAGGAGCTAGTGCAGGACGTGTCCGCCGTCATCGACT
GCCTGGGATACGGTCCCCGGGAGGACGGCACCCCGGGCGGCGGTTGCCTC
CTGATCGGGCATGACTGGGGGGGGCTGGTGGCGTGGGCGGCGGCCCATGT
CTTGGGCCCGCGCTGGGTCCGAGGTCTCTGCGTCATGAACTGCCCGCACC
CGACTGCCTTTATGACGCAGGCGGGACTCAGCCAATTTTTCAAGTCTTGG
TATTTCTATTtTTTCCAGGTCCCCTTCTTACCAGAGACCATGCTGGGCGC
CGGGGAGTGGACCTGGATCGGCGCGTCTTTTCGAGGCAAACGCATGGGGC
TCCAACGTCCCGACGCCCGCATGACGGACACTGACTTATTGGTCATGAAA
CACGGCTTCTCCCAGCCCGGCGTGGCCCGAGCCGCCGTGAACTACTACCG
GGCCAACATGttccggaggaaggaggagacgatggaggaggcattGGCTG
GGCGGGTGCCGGTGCCCGTGCTGGTGATATGGGGCCAACAAGacaaggcc
ttggaggagatcCTCGTGGACGGAACGGAGAACCACGTGGCGCACGGCga
caagggcggggggaaggagggctgcgCGTGGTCAAGATCCCGGACGCCAG
CCATTGGGTGCAGGTGGATGCTCCTGCAGAAGTGAATGCCACCTGTTACG
GCGCCGCACAATCCCTCCACaccttcgtctccctccaaTTTTTCTTTCAA
GGCTAGCCGTCCTAGCCTTCCTCGATCCCTGCAGCGCGTCTTGGCCAAGT
TGCTCACACATCCTCTTGTGGTTCCACTGATATCTTACGCGTATGCCGCG
CCTTTCTTAATTCTATGGGCCAGAGTGCGTCTAGCGTCATTTttaaaagg
gaaaaaaatgcttgCTCCCATTGCACCAACGGACGATGTGGCTGCAGCGC
TGTTGAACAAGGAATACGGGGCACACAAATATCTGGAAGCGAATGGGTTG
CGTTTCCACTACGTAGAAGCGGGGCATCCCTCGAGTACCTCCCCGTTGGT
CTTATTCTTGCACGGCTTCCCGGAGTTTTGGTACTCTTGGCGCCACCAGC
TTCAATTTCTAGGGAGCCGTGGCTTTCATGCAGTAGCTTTGGATATGCGG
GGATACGGCTGGACAGACAAACCGGAGGaaATCGCTTCCTACAACCTGGA
GGAGCTAGTGCAGGACGTGTCCGCCGTCATCGACTGCCTGGGATACGGTC
CCCGGGAGGACGGCACCCCGGGCGGCGGTTGCCTCCTGATCGGGCATGAC
TGGGGGGGGCTGGTGGCGTGGGCGGCGGCCCATGTCTTGGGCCCGCGCTG
GGTCCGAGGTCTCTGCGTCATGAACTGCCCGCACCCGACTGCCTTTATGA
CGCAGGCGGGACTCAGCCAATTTTTCAAGTCTTGGTATTTCTATTtTTTC
CAGGTCCCCTTCTTACCAGAGACCATGCTGGGCGCCGGGGAGTGGACCTG
GATCGGCGCGTCTTTTCGAGGCAAACGCATGGGGCTCCAACGTCCCGACG
CCCGCATGACGGACACTGACTTATTGGTCATGAAACACGGCTTCTCCCAG
CCCGGCGTGGCCCGAGCCGCCGTGAACTACTACCGGGCCAACATGttccg
gaggaaggaggagacgatggaggaggcattGGCTGGGCGGGTGCCGGTGC
CCGTGCTGGTGATATGGGGCCAACAAGacaaggccttggaggagatcCTC
GTGGACGGAACGGAGAACCACGTGGCGCACGGCgacaagggcggggggaa
ggagggctgcgCGTGGTCAAGATCCCGGACGCCAGCCATTGGGTGCAGGT
GGATGCTCCTGCAGAAGTGAATGCCACCTGTTACGGCGCCGCACAATCCC
TCCACaccttcgtctccctccaaTTTTTCTTTCAAGGCTAGCCGTCCTAG
CCTTCCTCGATCCCTGCAGCGCGTCTTGGCCAAGTTGCTCACACATCCTC
TTGTGGTTCCACTGATATCTTACGCGTATGCCGCGCCTTTCTTAATTCTA
TGGGCCAGAGTGCGTCTAGCGTCATTTttaaaagggaaaaaaatgcttgC
TCCCATTGCACCAACGGACGATGTGGCTGCAGCGCTGTTGAACAAGGAAT
ACGGGGCACACAAATATCTGGAAGCGAATGGGTTGCGTTTCCACTACGTA
GAAGCGGGGCATCCCTCGAGTACCTCCCCGTTGGTCTTATTCTTGCACGG
CTTCCCGGAGTTTTGGTACTCTTGGCGCCACCAGCTTCAATTTCTAGGGA
GCCGTGGCTTTCATGCAGTAGCTTTGGATATGCGGGGATACGGCTGGACA
GACAAACCGGAGGaaATCGCTTCCTACAACCTGGAGGAGCTAGTGCAGGA
CGTGTCCGCCGTCATCGACTGCCTGGGATACGGTCCCCGGGAGGACGGCA
CCCCGGGCGGCGGTTGCCTCCTGATCGGGCATGACTGGGGGGGGCTGGTG
GCGTGGGCGGCGGCCCATGTCTTGGGCCCGCGCTGGGTCCGAGGTCTCTG
CGTCATGAACTGCCCGCACCCGACTGCCTTTATGACGCAGGCGGGACTCA
GCCAATTTTTCAAGTCTTGGTATTTCTATTtTTTCCAGGTCCCCTTCTTA
CCAGAGACCATGCTGGGCGCCGGGGAGTGGACCTGGATCGGCGCGTCTTT
TCGAGGCAAACGCATGGGGCTCCAACGTCCCGACGCCCGCATGACGGACA
CTGACTTATTGGTCATGAAACACGGCTTCTCCCAGCCCGGCGTGGCCCGA
GCCGCCGTGAACTACTACCGGGCCAACATGttccggaggaaggaggagac
gatggaggaggcattGGCTGGGCGGGTGCCGGTGCCCGTGCTGGTGATAT
GGGGCCAACAAGacaaggccttggaggagatcCTCGTGGACGGAACGGAG
AACCACGTGGCGCACGGCgacaagggcggggggaaggagggctgcgCGTG
GTCAAGATCCCGGACGCCAGCCATTGGGTGCAGGTGGATGCTCCTGCAGA
AGTGAATGCCACCTGTTACGGCGCCGCACAATCCCTCCACaccttcgtct
ccctccaaTTTTTCTTTCAAGGCTAGCCGTCCTAGCCTTCCTCGATCCCT
GCAGCGCGTCTTGGCCAAGTTGCTCACACATCCTCTTGTGGTTCCACTGA
TATCTTACGCGTATGCCGCGCCTTTCTTAATTCTATGGGCCAGAGTGCGT
CTAGCGTCATTTttaaaagggaaaaaaatgcttgCTCCCATTGCACCAAC
GGACGATGTGGCTGCAGCGCTGTTGAACAAGGAATACGGGGCACACAAAT
ATCTGGAAGCGAATGGGTTGCGTTTCCACTACGTAGAAGCGGGGCATCCC
TCGAGTACCTCCCCGTTGGTCTTATTCTTGCACGGCTTCCCGGAGTTTTG
GTACTCTTGGCGCCACCAGCTTCAATTTCTAGGGAGCCGTGGCTTTCATG
CAGTAGCTTTGGATATGCGGGGATACGGCTGGACAGACAAACCGGAGGaa
ATCGCTTCCTACAACCTGGAGGAGCTAGTGCAGGACGTGTCCGCCGTCAT
CGACTGCCTGGGATACGGTCCCCGGGAGGACGGCACCCCGGGCGGCGGTT
GCCTCCTGATCGGGCATGACTGGGGGGGGCTGGTGGCGTGGGCGGCGGCC
CATGTCTTGGGCCCGCGCTGGGTCCGAGGTCTCTGCGTCATGAACTGCCC
GCACCCGACTGCCTTTATGACGCAGGCGGGACTCAGCCAATTTTTCAAGT
CTTGGTATTTCTATTtTTTCCAGGTCCCCTTCTTACCAGAGACCATGCTG
GGCGCCGGGGAGTGGACCTGGATCGGCGCGTCTTTTCGAGGCAAACGCAT
GGGGCTCCAACGTCCCGACGCCCGCATGACGGACACTGACTTATTGGTCA
TGAAACACGGCTTCTCCCAGCCCGGCGTGGCCCGAGCCGCCGTGAACTAC
TACCGGGCCAACATGttccggaggaaggaggagacgatggaggaggcatt
GGCTGGGCGGGTGCCGGTGCCCGTGCTGGTGATATGGGGCCAACAAGaca
aggccttggaggagatcCTCGTGGACGGAACGGAGAACCACGTGGCGCAC
GGCgacaagggcggggggaaggagggctgcgCGTGGTCAAGATCCCGGAC
GCCAGCCATTGGGTGCAGGTGGATGCTCCTGCAGAAGTGA back to top
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