rna7308, rna7308 (mRNA) Nannochloropsis gaditana

Overview
Namerna7308
Unique Namerna7308
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1738
Alignment locationCM002471.1:297422..297843 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102066g1.391.mrna
Orig protein idgnl|cribi|Naga_102066g1.391
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:297422..297843 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102066g1gene7073Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23382.1cds7291Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7308rna7308-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7308 ID=rna7308|Name=rna7308|organism=Nannochloropsis gaditana|type=mRNA|length=1738bp
AAAGTAGACCCTGTGTGGTGATTAATTGAACTTCCAAGACGGGGAGGAAC
ACTGCTTTGACCTCCCCACCTCTGCCAAGCCCAGCGACTTTTTCACAACA
ATCGTACTTAAGTGCCTATTTACGATGCAAATGTGACAAAGTTCGCATCG
CACGTCTTATCAATCGGCTAAAAGGTGCTTTATATGCTCTTGCAGGAATT
AAAACGTCACGATTGGACTCCTTTTCCACCAGTACGCTCCGAGCGTTGAA
GGGGATACACTGCGTTGCGCTGCATTAGAAGAGCTCCTGCAGCCAGGGTC
AGGATATAACATATGGACTTGTTCATCGAGCTAGGTTTGTTAGTCGGCTT
GGCGTCGTTGCTTCTCGTCGTGTCCTCGATCAATGCCACCTTGGTCACGC
TCTCCCTCCTCCTTGGGTGCCTGTTGCTACTTGCTGGTGTGCTTGAGCCC
TTCGAGATTCCGTGGTACGTGTGGGCTGCCCTTTGCCTCTACCTCGCCGT
CCGTCACCAAGGTAGCGGATACACTAAAGGGAGCCTCTGCAAAGCGGCGG
CCGATGGAAACATAGCACTGGTTCGGAAGCTACTGGCGGTAAATCACGGC
CAGTACGCGCTGGAGCTGGACCATAAGGGCTATTCCCCTCTCATGCACGC
GGCCCGTCGAGGTGATTTGCCCATGGTGCGGCTCCTACTTGCCACCAACT
TGTACGACGCGCACAATGTCTCCATCAAATCTCGCAGCGGGAAGTCTGCG
CTCTTCCTGGCAGCACAAGCCAAGCAGGAAGCGATGGTCCGACTCCTGCT
GGAGCATGGTGCTGATCCCGCTGGCTTGGCCCGGGACAGCTGGGCACAAC
GCTTTCTTCCCTTCTTGACCGCCCCTCCCGCCTCTCAACGCCCGATCCCC
GCGGGCCCACAGCCTCGACGCCGGGCGCGTCGTCCGCCCCCACCTGACTA
CCCGGATGTACACCCGGGGCCTCAGCCTTCCTCCTGGCAAGCATCCTCCT
GCTCCCCCCCAAAAGCCATCCCCGTCGCTGTTGCTCTCCCTCCGTCGGCG
CCTCCGGCCTCAACCTTCGCCCATGCCTCCGTCTCCCCGGGCATTGTGAG
GGAGGGAGGGGGGGAGACGCTCTTGCCCGCCGGGTGGGAGGAGAGGATAA
CCGCGGAGGGGCACGTGTTCTATGTCGACCATGGAGGCCGACGGACAAGC
TGGGAGAGACCCGTGTCGGGCGTGGACATGTGAGGGGCGGGTGAGGGACA
GGGAGGGCTCGATGGGCAAGAGAGGGAAAGGGGGTAGCGGGGCTGGGGGA
GAGGCCTGAGTGCGAGAGAAAGGGAGGACGTGTGTGAAGTAGAAATGGGT
AAAGAGAGGAAGGGCGAGAGTGGAAAAGAGCGGGGAGGGAGGGAGAGGAG
GGAGAGAGGGAGGGAGGGAGGAAGGCAGGGAAGGAGAGGGGCCGGCCGGA
GTGTAGGTGAGGGGCTGCCACGGCGAAGGGGATAGAGGGCGATTCTCGTG
GGGCCAAAAATGGCGGGAAATCCTTTGGCGAAAGAGACGAATCGTAAGGA
CAGGTGTGCAGTAAAGCTAGGTTGTGTACAGAATGTAATGGGGAGATAGG
GAGGTAGACCGGAAGGCGTTGATGTCGCCCAGACCCGAGTCAAAGCACAT
CTTACAACGAAAATGATGGCGAGGCCGCTCCTTCATTGATCTCTAAGAGG
GCCTGACTGCCCCTCTTGCTGTCAGTGTGCCTTTCTGC
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protein sequence of rna7308

>rna7308-protein ID=rna7308-protein|Name=rna7308|organism=Nannochloropsis gaditana|type=polypeptide|length=137bp
MTRGPSPTRKGFDLPPLCPITPRTWAHHALFLPSQAPPSSPVPPPTFPRP
VAHDPLVLPRRRPKLGGGEPAGGPGPQISRKRDVPPPEPCRRPADVDGGP
LGDGGGAQTRARRRRRLGLPLGGERPSYGPWSGPFGG
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mRNA from alignment at CM002471.1:297422..297843-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7308 ID=rna7308|Name=rna7308|organism=Nannochloropsis gaditana|type=mRNA|length=422bp|location=Sequence derived from alignment at CM002471.1:297422..297843- (Nannochloropsis gaditana)
AGGAGCAGTGAATGACACGTGGTCCCTCACCGACGAGGAAAGGCTTCGAT
TTGCCTCCTCTTTGTCCCATAACTCCACGAACATGGGCTCACCACGCCCT
CTTCCTCCCTTCACAGGCGCCCCCGTCCTCCCCCGTCCCTCCTCCCACGT
TCCCGCGGCCCGTGGCCCATGACCCCCTGGTCCTCCCGCGCAGGCGGCCG
AAGCTTGGAGGAGGAGAGCCTGCGGGTGGACCTGGCCCTCAAATTTCGCG
AAAAAGAGATGTCCCTCCTCCAGAGCCTTGTCGGCGGCCTGCGGACGTGG
ACGGCGGCCCTCTCGGAGATGGGGGTGGTGCTCAAACTCGTGCTCGCCGG
CGCCGGCGGCTTGGTCTTCCTCTGGGGGGGGAGCGTCCTTCGTATGGGCC
GTGGTCAGGCCCTTTTGGGGGG
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Coding sequence (CDS) from alignment at CM002471.1:297422..297843-

>rna7308 ID=rna7308|Name=rna7308|organism=Nannochloropsis gaditana|type=CDS|length=411bp|location=Sequence derived from alignment at CM002471.1:297422..297843- (Nannochloropsis gaditana)
ATGACACGTGGTCCCTCACCGACGAGGAAAGGCTTCGATTTGCCTCCTCT
TTGTCCCATAACTCCACGAACATGGGCTCACCACGCCCTCTTCCTCCCTT
CACAGGCGCCCCCGTCCTCCCCCGTCCCTCCTCCCACGTTCCCGCGGCCC
GTGGCCCATGACCCCCTGGTCCTCCCGCGCAGGCGGCCGAAGCTTGGAGG
AGGAGAGCCTGCGGGTGGACCTGGCCCTCAAATTTCGCGAAAAAGAGATG
TCCCTCCTCCAGAGCCTTGTCGGCGGCCTGCGGACGTGGACGGCGGCCCT
CTCGGAGATGGGGGTGGTGCTCAAACTCGTGCTCGCCGGCGCCGGCGGCT
TGGTCTTCCTCTGGGGGGGGAGCGTCCTTCGTATGGGCCGTGGTCAGGCC
CTTTTGGGGGG
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Synonyms
Publications