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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100430g4.1387.mrna |
| Orig protein id | gnl|cribi|Naga_100430g4.1387 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:253070..254685 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7290 ID=rna7290|Name=rna7290|organism=Nannochloropsis gaditana|type=mRNA|length=1226bp
AGAGATGGGCACGTAACATCGTGTAGACATTGAAATGAGGCATATTGAAT
CTAATAAAATCAATCGATGGCTTTCCTTCCTCGCGTTGAATTTCATCCCC
ACAGGTTAGGCTGTTATCTTTTTAGAATTTTGGGCTATGACTACTAGGTA
TAAGAGTAAGGCGTAGACTAGACAGTGCGCCCGGGGCTTCCTCTACAGCC
ATGGCATCCTCACCACCGGCCCTCGTGCCTGAAGGCGTGCCCCTCCAATT
CATGGATGCGGACGATGAAGCCGACCTTCTGTGTGGTTTGGACGAGGACG
TGTTTGGAGCCGGAGAGGTGGGCGGCATGGACCAATTTCTGGCGCAGGGC
GTTCTGACGGACTTGGAAATGGACAGCATGTGGAGTAAGGTGGTAGGGGG
AGAGAACTTGCACCAACAGGCCCTGTCCCCCGCCCAGCCTCCCCACGCGC
CAAGCTGCAGCCCTCCCTCCCTCCCGCCCGACCCCATGCTTGCCATAAGC
CGGCAGCCTAGCACCTGCACCAGTGTCCAAAGCAGCGGCAGCTGCAGCAC
AAGCGGTGGGACCCGACCGCGGGGCAGGGGCAGGCAGGGCGGAGGGGGCG
AGCGGGGAAGGAAGAAGAAGGGCCTGGGGGCGACCGGGCTGCGACGCGGA
GAGAAGGCGGTGAAAGGGGAGGATGCCGGGAGTATCTGGAATGGGGTCGG
AAGCGCGGGGTCAGGCGAGACCAAGGCTTTCAGCGTCTCGGACGGGAGCC
TGTCGGCCTCCTTGCCGCCCTCCGTCCCGCCCTCCGTCCCGGCCTCCGTC
CCGCCCTCCACGGCCCTCCCTCCCTCCCTGGCTCCCTTTGTGTCCGAGTC
CTTCTTTCCCCCGTTTGCGTCGGATCCGGCCTTGTGGAGGAGCTCCTCGA
CCCTGAGCGAGACGGACCGGAGTAGCAGCACCTGCACGGCGGGGACAGAG
GTCCCGCCGTGGCCGCCAGGGGGGTCAGGGGGGGCGTCCCCGAGGCGGAA
GGGGGGGAGGAAGCGAGGGAGGGAGGGGACGAAGCCGGCGGGTCCGAAAG
GAGCGAAAAAGGCGAGCGCGGGGAGGGGGAGAGGAGGAAAGGAGGAAAGC
TCTCGAGTAGGCGCGGGGGAGGGGCCCGAAGTGGGCGGGCAGGGAGGAGG
GGAGGGACTGGGACACTCCTTCCCACTGACGGGGGGGGCGCAGGTTTTTT
CCCCGGCGGGGGAGGAGAGGGAAGGA back to topprotein sequence of rna7290 >rna7290-protein ID=rna7290-protein|Name=rna7290|organism=Nannochloropsis gaditana|type=polypeptide|length=291bp
MREEEVLSKYQRYLRKKERALAAVAATGSKSRGEGGRGKEAGREGGLEVE
EDGHGLAKGERTEAGGAGGTSATSLSKASGPSSFPPSSSLFTFPPPVPGR
GAGSQGEEGPPGEGGGNGIGAGQTRQPNRRAEKTGGTAAGTGGGQEGSTA
RHAGLSREREDVGTKPGREGGLGEPRDPPMDLDKEKRALDTRGAEMEGAT
GQDLRRSSMALPMGHRGPRDGRHSLSEPPGILKVPPPMLMPLSPMDRGKE
GGDAGLAPEEAFARFGDLDSVLSPTAQGELISALGMDSSSW back to topmRNA from alignment at CM002471.1:253070..254685+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7290 ID=rna7290|Name=rna7290|organism=Nannochloropsis gaditana|type=mRNA|length=1616bp|location=Sequence derived from alignment at CM002471.1:253070..254685+ (Nannochloropsis gaditana)
atgcgggaggaagaggtgttGAGCAAGTACCAGAGGTAtttgaggaagaa
ggagagggctttGGCCGCGGTGGCTGCGACGGGATCGAAgtcgcgggggg
agggagggagggggaaggaggcagggagggaaggcggattggaggtggag
gaggatggacaCGGGCTCgccaagggggaaaggacagaggcaggaggcgc
agggGGGACAAGTGCGACCTCGTTGTCAAAGGCGTccggcccgtcctcct
tcccgccctcgtcctccctcttcacttttccccctccggtCCCTGGGCGC
GGGGCGGGAtcgcagggggaggagggcccccctggggagggaggcgggaa
cGGGATAGGGGCAGGACAGACCCGGCAGCCGAACCGAAGGGCGGAGAAAA
CGGGCGGGACGGCTGCGGGTACCGGTGGTGGCCAGGAGGGGAGCACGGCG
CGCCATGCGGGCCTAagcagagagagggaggacgtggggacgaagccggg
gagggagggaggcctgggggagCCACGCGACCCTCCCATGGATCTTGACA
AGGAAAAACGTGCCCTGGATACGAGGGgcgcggagatggagggggccacG
GGTCAAGACCTGCGCAGGAGCAGCATGGCCCTGCCGATGGGCCATCGGGG
CCCGCGGGACGGACGCCACTCGCTCTCGGAGCCTCCGGGTATCTTGAAAg
tgcccccccccatgctcatgcctctctcccccatGGACcggggtaaggag
ggaggggacgcgggCCTAGCTCCAGAGGAAGCGTTCGCCCGATTCGGGGA
CCTGGACTCGGTCTTGTCCCCGACGGCGCAGGGAGAGTTGATTTCCGCCC
TAGGCATGGACTCTTCCTCGTGGTGATAAaacgagggaaagggggggaag
cgcggggtgatggaggaaaggagggcgggaaggagggtttgaGGGAGGTA
AGATGactggtggggaggggggttggaTCGGATCAGAGACTTGGGAGTGT
TCTCGTGGTGAAAAGATTGAGAGACCGTGCTGTGTAGAGGACGCATGCCT
TGCGCGGTCCGGATTCGGGGGAATAGTCCGGAGGCGACGGCCCACGCCTG
TCAACCGATGGTCTGATGGATCTTGGGTGTATCATACAGGGgatgggaat
gggagggaggatgcaaGTAGGAAAGACGTGGGCGAGAGGGTCAGGGTTGT
GTGTAGGGGGTGCTTGGTGGCGTGTCCTGCCAGACAGGGGCGGCTAGGGC
GGTTCGTAGAGCCTTGTtcgtgggggagagaggggaggtaggggctGGGA
GGCTTCCTCGTGTCACaacggtggagagggagggtggcgcgTGTCGGGAG
TCGTCCTCCGAGAGCACAGAGGCCCGCACCGCCGACAAAGGAAGCTGCCG
CTGGGAGTTGAATTCCcgcaagagagggaggggttgctGCCGCGTGACAG
CCGGATGATGGGCCGGTGCTTGTGCCCTCAAGGGGAAGTTACGTGGTCGG
GCCCAGGAGAGGGTTTGCGATACgtttcgccgcctcccttaCCCCACGCC
CGTGAAAGCAGgggccgaaggaggaaacagtTTTAAAAAAATCGAAATCA
ACAAATCATGCCACGA back to topCoding sequence (CDS) from alignment at CM002471.1:253070..254685+ >rna7290 ID=rna7290|Name=rna7290|organism=Nannochloropsis gaditana|type=CDS|length=876bp|location=Sequence derived from alignment at CM002471.1:253070..254685+ (Nannochloropsis gaditana)
atgcgggaggaagaggtgttGAGCAAGTACCAGAGGTAtttgaggaagaa
ggagagggctttGGCCGCGGTGGCTGCGACGGGATCGAAgtcgcgggggg
agggagggagggggaaggaggcagggagggaaggcggattggaggtggag
gaggatggacaCGGGCTCgccaagggggaaaggacagaggcaggaggcgc
agggGGGACAAGTGCGACCTCGTTGTCAAAGGCGTccggcccgtcctcct
tcccgccctcgtcctccctcttcacttttccccctccggtCCCTGGGCGC
GGGGCGGGAtcgcagggggaggagggcccccctggggagggaggcgggaa
cGGGATAGGGGCAGGACAGACCCGGCAGCCGAACCGAAGGGCGGAGAAAA
CGGGCGGGACGGCTGCGGGTACCGGTGGTGGCCAGGAGGGGAGCACGGCG
CGCCATGCGGGCCTAagcagagagagggaggacgtggggacgaagccggg
gagggagggaggcctgggggagCCACGCGACCCTCCCATGGATCTTGACA
AGGAAAAACGTGCCCTGGATACGAGGGgcgcggagatggagggggccacG
GGTCAAGACCTGCGCAGGAGCAGCATGGCCCTGCCGATGGGCCATCGGGG
CCCGCGGGACGGACGCCACTCGCTCTCGGAGCCTCCGGGTATCTTGAAAg
tgcccccccccatgctcatgcctctctcccccatGGACcggggtaaggag
ggaggggacgcgggCCTAGCTCCAGAGGAAGCGTTCGCCCGATTCGGGGA
CCTGGACTCGGTCTTGTCCCCGACGGCGCAGGGAGAGTTGATTTCCGCCC
TAGGCATGGACTCTTCCTCGTGGTGA back to top
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