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Properties
| Property Name | Value |
|---|
| Product | spliceosomal protein |
| Orig transcript id | gnl|cribi|Naga_100077g18.5197.mrna |
| Orig protein id | gnl|cribi|Naga_100077g18.5197 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:246484..248903 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7288 ID=rna7288|Name=rna7288|organism=Nannochloropsis gaditana|type=mRNA|length=1233bp
ATGCTTCCTCGAAGCCCAAGATGTTATAAGCGTCCAGTAGGAAAAATTCT
ACGCCCGCTCTTCCTACTCGCGTCCATTGCTGGCTGTACCCTGGCATGGA
GGCCCCTCCTGTCCATTGTCTCGTCCCCCTCCCTCGTCCCTCGCCATCTC
CTACAATCCCTTCAGCCCGCCCACGGGCCCGCCTATGCACTCCCACGACC
ATCGAGGCTCGTGTCACAAGCCTCCTTCTCATCCCAGTCGTCCGCAGACG
ATCCTATTGTGGACGCGAGCGATGGGGTGGGGAGAGCGGTCAGAGAGGAG
GAGCGCATGGGCCCCGGGGCGCCTGAAGGATACTGGTCCGACGTGGAAAA
TATCAAACATGAGCTGGATGTTTTCTTTACGGTCCGAGCGGCTGAGGAGC
GCCGGCTTTTGGAAGAAAAATCCGGGAATCCCCTCCGGAACTACCTGGGC
CTCGCCGATGAAGAGCAGAAACGGATCCGACGCCGGGGTGCCTTGATCGA
TAGAGACCTGTACAGCGACCTCCGCCGATACGGCTTTGATTATCTGGTAC
TGCCTATCATGGAGCAAGGCGGTTTTAGGGCCTTTGCGGCCATCTTCGCC
GTCAACGGGGACCATCCCCCCCGGGAGGAACAGACAGGCGGCCTGGCCCT
GGGGGCGGCTTTGGAGGCTAAGTTGGGTACTTTGTCAGACAAAGTGTCGG
CCTCGGTGGGCAAAGCCGGTGGGGAGGAAGGACGGAAGGGCCAGGCACCC
GTGGCAGCGTTGGGCAGAGAGGTTCTCAGGACAGGCCCTGAATCCTGGCG
CTACGAGACAGACGGCTTGGATCCCGCCCAGTGGAAGAAAGGGGAACTGG
ACACTACTGCCTCGCCCGCACCCAAGCTCAAGAGCGACGTTTGGAAATAC
TCGGGGCTTTCCAACCCGAGTAAGCTGTACAGCGCGCTGCTCCTCCTCGA
CATGGCCGTGGCTTGGGGCAAAGCAACGTCAGGCGCGCTTGATCGTGGTT
TCCTTACGCCCTCCCTTCTGTCCTATATTCAGCTCGCTGCTGAGGTGGGA
ATACTGGCAAATCTCTTGAGCGTGCCCCTTACCTTCTTGTTCGTGTCGAA
AACTGGACAGCCGGTCGAGAAAGCCGTGTCCTTAGCCTTGAAAGCCTTTG
TGGGGGGACCGGTGTTGTTGGTGGAATGCCGCTTTCAAGGAGACTTTGAC
GTCCTCGAGACCAGAGATATAGCAAACAAGTGA back to topprotein sequence of rna7288 >rna7288-protein ID=rna7288-protein|Name=rna7288|organism=Nannochloropsis gaditana|type=polypeptide|length=383bp
MATPFIVRVRNASVMLTIFAAAVMQTRTWETLLSALCPHGRGGIPCLSRL
YRNVYVLLPSSIVQGMHRWSYQWDLAWPSAIVRRAPQRICSSPHRREDSV
RAETPRICRTASFHREQKLPWPFPTSCARSSLPLLSLPSPLGRGKSGLST
RGQDYVKMGDIPPNQTLYVQNLNEKLNKVSLKKLLYLAFSAYGRVIDIVA
CRGESLRGQAWVVFDSVGSATTALRSLQGFPFLGKPMRIQFAKGKSNAVA
LREGTYEPGSKRRKRGEKDGKKKEESQKLSGSRDEGKRGKEAEAEEHVAG
MALAAGEVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRLAGQRGIAFI
EFRDEVSARTAFQAYNGFKLSQTDALKLTYAKR back to topmRNA from alignment at CM002471.1:246484..248903- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7288 ID=rna7288|Name=rna7288|organism=Nannochloropsis gaditana|type=mRNA|length=2420bp|location=Sequence derived from alignment at CM002471.1:246484..248903- (Nannochloropsis gaditana)
GAGAGAGGGAGATAATGTTGACCGTCCCCACGACATCCCGCACGCCTTCG
CCTGCCACGTGAAGAGTTTGTCGTCGTACCAGTTTGGCAGACGTCTAATC
ACTTAGTGCGCTCGTTGACGCCGACGGGGGCTTTGCACGGCATTGACTTG
GGAGTGAGGAGGAGGTTAGTGATATAAACGCCCGGTTGTCATCGAGCGTT
GAGAGGTCGCCATTCATATCATGTACGCCTTCCATGCTCACAACATACTG
GCTGCATACTGCAGGGCATGCTCACTCTAGGATAGAGAGAAGCGATTCTT
TTGTGGTGCCAGTGCGGTGAAGACGAGGGAAACAAGGGCCTGCATGACGG
ACAACCTCTCCATCGTGCATAGCCCTTTTCCTTGCTGTCTCTCGTCGAAT
TATAGGGACTGTTTCGCTGGAGAGGGTGCACTTATTTGTCTGCACGCTAT
ACAGAGACGCTGTTACCTGAAGAGGCGCTCGTGTCGGAGTTAATCTGCAC
TTTTCTCGCGGTACAATATTTGTGGTTGGAGGCCCTTAGTTTTCATGCAG
GCTTTCGACCAATACCGTTCGAGACACCAATCTGAGATGCTATGGCATGT
TCTTGGGTTTATGTTGATGATATCACATGGCAACGCCGTTCATTGTCCGT
GTGAGGAATGCGTCGGTAATGCTTACCATTTTTGCAGCGGCAGTCATGCA
GACGCGAACATGGGAGACCCTGTTATCTGCTCTTTGTCCCCATGGACGCG
GTGGCATACCTTGCTTGTCGCGTTTGTACAGGAATGTGTATGTGTTGCTC
CCCTCCAGCATTGTGCAAGGCATGCACAGATGGTCCTATCAATGGGATCT
GGCCTGGCCGAGTGCCATTGTCAGACGTGCTCCTCAAAGAATATGTTCAT
CTCCTCACAGGCGCGAGGACAGCGTACGTGCCGAAACACCCCGGATTTGT
CGCACCGCCTCCTTTCATCGAGAGCAGAAGCTTCCTTGGCCTTTTCCGAC
CTCCTGTGCCCGATCTTCTTTGCCTCTTCTTTCCCTTCCTTCCCCCCTCG
GCAGAGGGAAATCTGGACTTTCCACGCGAGGACAAGATTACGTGAAAATG
GGGGACATTCCACCGAACCAGACGTTATACGTGCAAAACCTGAACGAAAA
GTTGAACAAAGTTTCCCTGAAAAAACTCTTGTACCTCGCCTTCTCCGCCT
ACGGGCGTGTCATCGACATTGTCGCCTGCCGTGGCGAGTCCCTCCGGGGA
CAGGCGTGGGTCGTGTTTGACTCCGTGGGCAGTGCCACGACTGCGTTGAG
GAGCTTGCAAGGTTTCCCCTTTCTGGGCAAACCGATGCGCATCCAGTTTG
CGAAGGGCAAGAGCAACGCGGTGGCCCTCAGGGAAGGCACCTACGAGCCA
GGGAGCAAACGGCGCAAGCGAGGGGAGAAAGACGGAAAGAAGAAGGAGGA
AAGCCAAAAGCTCAGCGGATCAAGAGATGAGGGGAAGCGAGGAAAAGAAG
CAGAGGCGGAGGAGCACGTCGCGGGAATGGCACTGGCGGCAGGGGAAGTG
AGCAGCATGCTGATGGCCCAGGAGCTACCTACAGAGTGCACGGAGGAGGT
AAGGAGGGGAAGACGTATGCAGCTGGGACGATTATCTGAAGCCGGGAGCA
GATACAGACAGTACGATGACATTAGATTGTGGGCGAAATGGTCGAGGTAT
TTTGCTTCCCATGCCATATCTGGCATGGGTCCCTCTCACCCTTTCCTTTC
TTTCCCACCCTGCACACAGATGTTGGCTGTCCTGTTCAGACGTTTCGCCG
GCTTCCACGAGATTCGATTGGCGGGTCAACGCGGCATTGCTTTCATTGAA
TTTCGGGACGAAGTATCTGCACGTACCGCCTTTCAAGCGTACAACGGATT
CAAACTCTCTCAAACCGACGCGCTCAAATTGACTTACGCGAAGAGGTGAT
ACGGCAACATGAGGGGACGTGAGCGGTTAATAGAGGGGTGTGGATGAAGT
GAGGAACAATACATGTCATAGTCATAATAAATCGGCATGCCTCAACGCAA
CAAGCGACAGATGAAGCCATGTCTTAGCTATGAAGGATATCAGCGTGTCC
GTGGCCCATTTCTTTACTAGCAGTTGCCTTCCTGATCGTGTATGGAGCAA
GCATGGCTTCCGGCTTGTTGCTTTTAAGATCTAGCGTGAAAGATATGTTA
ACTTTCGAAAATTGAGTCTTAGGATGGAGACTACACTTTATGCACGCAAA
GAAAGCCTCGCCATGTTTTTAATAAAGTTTATACTGATCCCCCTACGCAG
CAAAACGTTGCATAACGTGGACTTTATTTTACCCTTATCGAAAAGGTTTC
GGGTGATGTCGGCATAGATTTATTTATCGAATTTCTTACCATGCTTATGA
CAGCAAAGAGGTGGTCGATG back to topCoding sequence (CDS) from alignment at CM002471.1:246484..248903- >rna7288 ID=rna7288|Name=rna7288|organism=Nannochloropsis gaditana|type=CDS|length=2304bp|location=Sequence derived from alignment at CM002471.1:246484..248903- (Nannochloropsis gaditana)
ATGTTGGCTGTCCTGTTCAGACGTTTCGCCGGCTTCCACGAGATTCGATT
GGCGGGTCAACGCGGCATTGCTTTCATTGAATTTCGGGACGAAGTATCTG
CACGTACCGCCTTTCAAGCGTACAACGGATTCAAACTCTCTCAAACCGAC
GCGCTCAAATTGACTTACGCGAAGAGGTGAATGGCAACGCCGTTCATTGT
CCGTGTGAGGAATGCGTCGGTAATGCTTACCATTTTTGCAGCGGCAGTCA
TGCAGACGCGAACATGGGAGACCCTGTTATCTGCTCTTTGTCCCCATGGA
CGCGGTGGCATACCTTGCTTGTCGCGTTTGTACAGGAATGTGTATGTGTT
GCTCCCCTCCAGCATTGTGCAAGGCATGCACAGATGGTCCTATCAATGGG
ATCTGGCCTGGCCGAGTGCCATTGTCAGACGTGCTCCTCAAAGAATATGT
TCATCTCCTCACAGGCGCGAGGACAGCGTACGTGCCGAAACACCCCGGAT
TTGTCGCACCGCCTCCTTTCATCGAGAGCAGAAGCTTCCTTGGCCTTTTC
CGACCTCCTGTGCCCGATCTTCTTTGCCTCTTCTTTCCCTTCCTTCCCCC
CTCGGCAGAGGGAAATCTGGACTTTCCACGCGAGGACAAGATTACGTGAA
AATGGGGGACATTCCACCGAACCAGACGTTATACGTGCAAAACCTGAACG
AAAAGTTGAACAAAGTTTCCCTGAAAAAACTCTTGTACCTCGCCTTCTCC
GCCTACGGGCGTGTCATCGACATTGTCGCCTGCCGTGGCGAGTCCCTCCG
GGGACAGGCGTGGGTCGTGTTTGACTCCGTGGGCAGTGCCACGACTGCGT
TGAGGAGCTTGCAAGGTTTCCCCTTTCTGGGCAAACCGATGCGCATCCAG
TTTGCGAAGGGCAAGAGCAACGCGGTGGCCCTCAGGGAAGGCACCTACGA
GCCAGGGAGCAAACGGCGCAAGCGAGGGGAGAAAGACGGAAAGAAGAAGG
AGGAAAGCCAAAAGCTCAGCGGATCAAGAGATGAGGGGAAGCGAGGAAAA
GAAGCAGAGGCGGAGGAGCACGTCGCGGGAATGGCACTGGCGGCAGGGGA
AGTGAGCAGCATGCTGATGGCCCAGGAGCTACCTACAGAGTGCACGGAGG
AGATGTTGGCTGTCCTGTTCAGACGTTTCGCCGGCTTCCACGAGATTCGA
TTGGCGGGTCAACGCGGCATTGCTTTCATTGAATTTCGGGACGAAGTATC
TGCACGTACCGCCTTTCAAGCGTACAACGGATTCAAACTCTCTCAAACCG
ACGCGCTCAAATTGACTTACGCGAAGAGGTGAATGGCAACGCCGTTCATT
GTCCGTGTGAGGAATGCGTCGGTAATGCTTACCATTTTTGCAGCGGCAGT
CATGCAGACGCGAACATGGGAGACCCTGTTATCTGCTCTTTGTCCCCATG
GACGCGGTGGCATACCTTGCTTGTCGCGTTTGTACAGGAATGTGTATGTG
TTGCTCCCCTCCAGCATTGTGCAAGGCATGCACAGATGGTCCTATCAATG
GGATCTGGCCTGGCCGAGTGCCATTGTCAGACGTGCTCCTCAAAGAATAT
GTTCATCTCCTCACAGGCGCGAGGACAGCGTACGTGCCGAAACACCCCGG
ATTTGTCGCACCGCCTCCTTTCATCGAGAGCAGAAGCTTCCTTGGCCTTT
TCCGACCTCCTGTGCCCGATCTTCTTTGCCTCTTCTTTCCCTTCCTTCCC
CCCTCGGCAGAGGGAAATCTGGACTTTCCACGCGAGGACAAGATTACGTG
AAAATGGGGGACATTCCACCGAACCAGACGTTATACGTGCAAAACCTGAA
CGAAAAGTTGAACAAAGTTTCCCTGAAAAAACTCTTGTACCTCGCCTTCT
CCGCCTACGGGCGTGTCATCGACATTGTCGCCTGCCGTGGCGAGTCCCTC
CGGGGACAGGCGTGGGTCGTGTTTGACTCCGTGGGCAGTGCCACGACTGC
GTTGAGGAGCTTGCAAGGTTTCCCCTTTCTGGGCAAACCGATGCGCATCC
AGTTTGCGAAGGGCAAGAGCAACGCGGTGGCCCTCAGGGAAGGCACCTAC
GAGCCAGGGAGCAAACGGCGCAAGCGAGGGGAGAAAGACGGAAAGAAGAA
GGAGGAAAGCCAAAAGCTCAGCGGATCAAGAGATGAGGGGAAGCGAGGAA
AAGAAGCAGAGGCGGAGGAGCACGTCGCGGGAATGGCACTGGCGGCAGGG
GAAGTGAGCAGCATGCTGATGGCCCAGGAGCTACCTACAGAGTGCACGGA
GGAG back to top
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