rna7265, rna7265 (mRNA) Nannochloropsis gaditana

Overview
Namerna7265
Unique Namerna7265
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length555
Alignment locationCM002471.1:176830..177853 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101942g1.8484.mrna
Orig protein idgnl|cribi|Naga_101942g1.8484
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:176830..177853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101942g1gene7030Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7265rna7265-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23425.1cds7248Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7265 ID=rna7265|Name=rna7265|organism=Nannochloropsis gaditana|type=mRNA|length=555bp
ATGCAACGTCGAGTTGTTTCGTCCATTCCTCACCCGCCCATCTCACCCCC
CCTCCCTCCCTCCCTCCCTTTCCAGGAACGCAACGTGATCGACTGCTGCC
GTGTCGAGTTCCTTCGGCCCGTCTCAAGTACGCCAGACACGCCGTCCTGC
GCCTTTGACGTCCAGTCCATTGAGCGGACATGGACGCTCTGCGCGGCGAA
CGAGACGGACCTTCAGCAGTGGCTCCTCCTCCTTGCCTCGGCCATCGACA
TGGACGTGGCCGTTCTCCCCGACGATGAAGTCTCCTTCCTGGTCAAGCCC
CGGTAGGCGTCTCCAACCGCCTTCGTCTCCCTCTCTCCCTCCCTCCCGGC
CACCCTCCCCACCTCTCTCTCGCTCTCTCTGTCTCTGTCCTGGCAAGTGC
CAGACCTTCTTCTTTGTGTATGACAGTCTCTTTTATTTCTCTCCTCGTAC
GCTGCCCTCGCTTTCTAAGCTGCCCACGCCTTTTTCTTCAGCTTGCATTA
AACTTGCATTCCCCAAATCCAATTACTGCGCTGATTGAACGTTGATCACA
TGTCC
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protein sequence of rna7265

>rna7265-protein ID=rna7265-protein|Name=rna7265|organism=Nannochloropsis gaditana|type=polypeptide|length=84bp
MFPCCHVLQLSEAAFHPDLPELFGGGTRLQTPPHSASSTGAVSAPEEAGP
LPVHRHVRRPHQTEAFPTQARESFLPQGWDPPFP
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mRNA from alignment at CM002471.1:176830..177853-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7265 ID=rna7265|Name=rna7265|organism=Nannochloropsis gaditana|type=mRNA|length=1024bp|location=Sequence derived from alignment at CM002471.1:176830..177853- (Nannochloropsis gaditana)
ATGTTTCCCTGCTGTCATGTCCTGCAGTTGAGTGAGGTGTGCTGGGACCA
CGCGCACTCCGCCGTGCGGCTCTCGTTGGAGGGCCGTGGGGAGGAAGAGA
AGGAGAAAGGGAGGGAAGGCGAGATCCAAGAAGGAGTAGAGAGAGGAAGC
GGAGGGGGCGAGAGGCAGCTTTTCATCCTGATCTTCCCGAACTCTTTGGA
GGTGGAACAAGACTTCAAACTCCGCCTCACAGGTAGAGGCCAGGGCCTTC
TCAGTCTCTCGCCCTCCCCCCTCCTTCCCTCCTACCTGTTGCTCTTCCTA
ACACCGCGCTTTCTCGTCCCGTCGTCCATCGTGCGATCTCTTGGCGGACC
CCTGTCCCGCCTTTTTCCCTTGCCCACTGGCTCCCCGACTCCCCGAGGCC
TTTCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCTCCTTCCTTCGTTCATT
CCTCCGCCCCTTCAATCTTCATGTCTTGATGTAAAACCCATCACAGCCCC
TGGCCGCTCTCTCTCTTTACCCATTCCCTCCTACCCTTTACCTCACACGC
CCTCCCTACGTCTCCCTCGCCGTTACCTTAACAGCGCTTCGTCGACCGGG
GCGGTCTCCGCACCTGAAGAAGCAGGTCCCCTTCCAGTACATCGGCATGT
TCGCCGGTACGTCTCTTGGTTCCTCTTCTTTTAAATTCTTCCCTCCTCCC
CTCCTTCTCGCCCTCCCTCTACCTTGGCCTCTCTGCCCCCAGCCCCCTTC
CCTATGTTCCCTCCTTTACTCTCTGGCCCCCCCTCCCTCCCTCCCCCTGC
TTTCCCCTCTTCGCTTTCCCCTACTCTTCGTCCCTCCCACACGCCCTTCG
TCTAAGCCAAGTCCGGCCGTGCAACCTACCCACCCTGCCTCCCTCTCTCC
CTCCCGCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGCCCC
ACCAAACCGAAGCCTTTCCAACGCAAGCGCGCGAATCTTTCCTGCCTCAA
GGCTGGGACCCTCCCTTCCCTTGA
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Coding sequence (CDS) from alignment at CM002471.1:176830..177853-

>rna7265 ID=rna7265|Name=rna7265|organism=Nannochloropsis gaditana|type=CDS|length=1020bp|location=Sequence derived from alignment at CM002471.1:176830..177853- (Nannochloropsis gaditana)
GCCCCACCAAACCGAAGCCTTTCCAACGCAAGCGCGCGAATCTTTCCTGC
CTCAAGGCTGGGACCCTCCCTTCCCTTGACGCTTCGTCGACCGGGGCGGT
CTCCGCACCTGAAGAAGCAGGTCCCCTTCCAGTACATCGGCATGTTCGCC
GGCAGCTTTTCATCCTGATCTTCCCGAACTCTTTGGAGGTGGAACAAGAC
TTCAAACTCCGCCTCACAGATGTTTCCCTGCTGTCATGTCCTGCAGTTGA
GTGAGGCCCCACCAAACCGAAGCCTTTCCAACGCAAGCGCGCGAATCTTT
CCTGCCTCAAGGCTGGGACCCTCCCTTCCCTTGACGCTTCGTCGACCGGG
GCGGTCTCCGCACCTGAAGAAGCAGGTCCCCTTCCAGTACATCGGCATGT
TCGCCGGCAGCTTTTCATCCTGATCTTCCCGAACTCTTTGGAGGTGGAAC
AAGACTTCAAACTCCGCCTCACAGATGTTTCCCTGCTGTCATGTCCTGCA
GTTGAGTGAGGCCCCACCAAACCGAAGCCTTTCCAACGCAAGCGCGCGAA
TCTTTCCTGCCTCAAGGCTGGGACCCTCCCTTCCCTTGACGCTTCGTCGA
CCGGGGCGGTCTCCGCACCTGAAGAAGCAGGTCCCCTTCCAGTACATCGG
CATGTTCGCCGGCAGCTTTTCATCCTGATCTTCCCGAACTCTTTGGAGGT
GGAACAAGACTTCAAACTCCGCCTCACAGATGTTTCCCTGCTGTCATGTC
CTGCAGTTGAGTGAGGCCCCACCAAACCGAAGCCTTTCCAACGCAAGCGC
GCGAATCTTTCCTGCCTCAAGGCTGGGACCCTCCCTTCCCTTGACGCTTC
GTCGACCGGGGCGGTCTCCGCACCTGAAGAAGCAGGTCCCCTTCCAGTAC
ATCGGCATGTTCGCCGGCAGCTTTTCATCCTGATCTTCCCGAACTCTTTG
GAGGTGGAACAAGACTTCAAACTCCGCCTCACAGATGTTTCCCTGCTGTC
ATGTCCTGCAGTTGAGTGAG
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Synonyms
Publications