rna7263, rna7263 (mRNA) Nannochloropsis gaditana

Overview
Namerna7263
Unique Namerna7263
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1076
Alignment locationCM002471.1:174149..174693 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102292g1.83.mrna
Orig protein idgnl|cribi|Naga_102292g1.83
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:174149..174693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102292g1gene7028Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7263rna7263-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23427.1cds7246Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7263 ID=rna7263|Name=rna7263|organism=Nannochloropsis gaditana|type=mRNA|length=1076bp
ACCCCCTGCGCTCTCCCACACCACCTCAGCCACCTATGTGGCCGAAGGGC
ATCCCCCCCCTCCCTCCTTCCCTCCATGGTCCAGTGGTCGTGCACGCTGG
CGGCCTCGGGGCAGGGGCTCCTTTTCCAGTACCCCTCCCTCCTGCAGGTC
CTCCTCCGTCACAACTACCAGGGGCATCAAGGTACTTTGCTGATCGTCTA
CAAGAACGTCTCCCCCCTTCCCTCCTCCCCGACCTCCGCTGCCCCCTCCC
TTCAGTTCCGCACATTCCAAGCCAGCCCGTCCTCCACCGTCCCCGGGCTG
CTCCTTCAAGCTTCTCCGCTCCAAGTGTCGGTCTTGGGACCGGGAGAAGA
AGCCTCGCAGACGGTGCGAGTGGTGTGTCTGGAGCCCTTTGATGCCTCGG
GGGGGGGCATCGAGGTCCTGGTTGAGTTTGGGACGGAAGAGGAGGAGGAC
GGGACGAATGCGGTCCCTGTGCGGTATAGCTTACCTTTGCCCTTGCCTGT
CTCGGTCCTGCATTTTGTGTGGGGCTTGCCCCTGCGTAAAGAGGACTTCC
TGGCCCAGTGGGAGGCGATCACGGTTCCCCAAGTTCAAGATACCTTCTTG
CCGACGAGGGAGGATGGGAAAGGGGAGGGACTGGAGGTGGGACCCTTGAT
TCGTCTGTTAACGAAACAATTCCATCTGCAAACGGTGCCGGAACTGTGTC
AACGCTCGCGACAGGCGCAGACTTGGACGTTTGCGGGGAGCTTGGAGACG
GGGTCCCTGTCCCCCCACGGCAAGCAGTTGCGCGTCCTGGTTCTGGTCCG
ACTGGAGCAGTACGAGGAAGGAGGAGAGCGGTGTGCGCGAGGTCGGAAGG
GCTATCGCCTGACCGTGCGTTCTGAGCATCCGGCGTGTGCCATGGGCGTC
TTCAAAGCAATCAAACTTCAATTGGGCGCGTGACAAGTGCCGCATTGTGT
GTCATGTGGGGTTTAAGGAGAATAAATTTGTGCTACTTGAAAAATGCGTT
CTTGGCGATGGGCAGGCTGAGGGAGCACGTCAACGAACGAAAATGCAGGA
GAATTAATGAAATCTCTGAATTGACG
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protein sequence of rna7263

>rna7263-protein ID=rna7263-protein|Name=rna7263|organism=Nannochloropsis gaditana|type=polypeptide|length=124bp
MEEGGREGGREGRKEGGERGAERVGKIALQLTVFKEDYSAKSDYIFRTRK
ASQIARTLEFHIEKYMAWAHMRLELEDGGEGEREGGRKGGREKGRASGRG
EGPARQKGTFLSMHPMYRQPHHLR
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mRNA from alignment at CM002471.1:174149..174693-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7263 ID=rna7263|Name=rna7263|organism=Nannochloropsis gaditana|type=mRNA|length=545bp|location=Sequence derived from alignment at CM002471.1:174149..174693- (Nannochloropsis gaditana)
ATGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGG
GGAGCGGGGAGCGGAGCGTGTGGTATCCGGTCCTGGTGCCTTCCGCCCGG
CTTGTAACCCCCCTCACGCCCGCCTTGTCTCTCTCCCTCTCTCCCTTTCT
CTCCCCTTCACTCCTCCCTTTCCTCTCCCTTTCCCTGCCTCTTCCCTCTT
CCTCCCTCTTTCGCTTCCTCCTTCCCTTTCTCCACCTCACAGGGCAAGAT
TGCCCTTCAACTCACTGTATTTAAAGAGGATTACAGCGCCAAGAGTGACT
ACATATTCCGGACACGGAAAGCCTCTCAAATCGCTCGCACGCTCGAGTTT
CACATCGAAAAATACATGGCATGGGCCCACATGCGGCTTGAATTGGAAGA
TGGTGGGGAGGGAGAGAGAGAGGGAGGGAGGAAGGGAGGGAGGGAGAAAG
GGAGGGCGAGCGGAAGGGGGGAGGGGCCAGCAAGGCAGAAGGGAACATTT
CTCTCCATGCACCCGATGTACCGGCAACCCCATCATCTCCGCTGA
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Coding sequence (CDS) from alignment at CM002471.1:174149..174693-

>rna7263 ID=rna7263|Name=rna7263|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at CM002471.1:174149..174693- (Nannochloropsis gaditana)
GGCAAGATTGCCCTTCAACTCACTGTATTTAAAGAGGATTACAGCGCCAA
GAGTGACTACATATTCCGGACACGGAAAGCCTCTCAAATCGCTCGCACGC
TCGAGTTTCACATCGAAAAATACATGGCATGGGCCCACATGCGGCTTGAA
TTGGAAGATGGTGGGGAGGGAGAGAGAGAGGGAGGGAGGAAGGGAGGGAG
GGAGAAAGGGAGGGCGAGCGGAAGGGGGGAGGGGCCAGCAAGGCAGAAGG
GAACATTTCTCTCCATGCACCCGATGTACCGGCAACCCCATCATCTCCGC
TGAATGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAGG
AGGGGAGCGGGGAGCGGAGCGTGTGGGCAAGATTGCCCTTCAACTCACTG
TATTTAAAGAGGATTACAGCGCCAAGAGTGACTACATATTCCGGACACGG
AAAGCCTCTCAAATCGCTCGCACGCTCGAGTTTCACATCGAAAAATACAT
GGCATGGGCCCACATGCGGCTTGAATTGGAAGATGGTGGGGAGGGAGAGA
GAGAGGGAGGGAGGAAGGGAGGGAGGGAGAAAGGGAGGGCGAGCGGAAGG
GGGGAGGGGCCAGCAAGGCAGAAGGGAACATTTCTCTCCATGCACCCGAT
GTACCGGCAACCCCATCATCTCCGCTGAATGGAGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAAGGAAGGAAGGAGGGGAGCGGGGAGCGGAGCGTGTG
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Synonyms
Publications