rna7261, rna7261 (mRNA) Nannochloropsis gaditana

Overview
Namerna7261
Unique Namerna7261
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length294
Alignment locationCM002471.1:171601..172397 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100238g2.1209.mrna
Orig protein idgnl|cribi|Naga_100238g2.1209
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:171601..172397 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100238g2gene7026Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7261rna7261-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23433.1cds7244Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7261 ID=rna7261|Name=rna7261|organism=Nannochloropsis gaditana|type=mRNA|length=294bp
ATGTATGGGCCGTCGTCCTCGTCCCGGCCCCGGACCACTTGCACCACAAA
GGCCCTCCAACGCATTGCTTCAGACCCGCCCTCCCTCCCGCTCTTTAAAC
GAGGTAGACATTCCCCTCTAACGACATACTCTTGGACCCATGTCAGCCCC
GGCCTTCCCACTTCTTTTGATCCCGCTCCCTACGAAGGGGCTGCTAAGAC
TTGGATAAAAGACGGTATTGCATGGAAGAGGGACCACCTGAGCTGGTACC
ATGTTGCGTGGCTCGAAGAGTCAATTTTATCTTCCAAGCTGTGA
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protein sequence of rna7261

>rna7261-protein ID=rna7261-protein|Name=rna7261|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MANRTCIQRGIFRETLARCIFVKIPATRFDPSSPCCYSLLACWGCPSTNE
GRHAISWGLVMYRKGHMKYTCPRKAVAWRNGAVNKSGVYAKRFHNDESRY
DRTF
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mRNA from alignment at CM002471.1:171601..172397-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7261 ID=rna7261|Name=rna7261|organism=Nannochloropsis gaditana|type=mRNA|length=797bp|location=Sequence derived from alignment at CM002471.1:171601..172397- (Nannochloropsis gaditana)
ATGGCGAACCGTACATGCATCCAGGTAGACAGATGTGCTTCTACCATTTT
TTTTCAGTAGTTACAAGAGATTTTCGTGCTTACTTTACCCATTTGTATTT
CTCCTGCACCCAGCAGCAACCTTTTTTCCACAATGCAATGTAACCTCCTC
CCTCGTCCACCGAAGGACGAGTTAAGGTCGGACGCCGTAGCGTCCTGTGT
CAACACCCCAAAAAGCCAAATTCCTCTTTATGAATATATCAACATACCCT
GATCGTAAAAACATGTCCAATCCCATCTGTCAACGTTGCACTGGAGAAGA
TCGAGCCGTAAAAGTGCAATTGGTTCGCGCAGAAAGAAGGAAGGAGTGGA
GCGTTCCCTCGTTCCATCCAACGGATTTCTTGTGGTAACGGTTCAAGTGG
ATGCACTAGTCCACTACGCCCGCAAGCAAAAGCCCACGAACTTCCCATCC
TCCCCTCCGCGTTCTCATGCGATGCCTGGTTGGGACGTGATGCTACCTAG
TGCCAGCGAGGCATATTTCGGGAAACGCTGGCACGATGCATATTTGTGAA
GATACCAGCCACGAGGTTTGACCCGTCCTCTCCGTGCTGTTATAGCTTGT
TGGCCTGCTGGGGATGTCCCTCTACCAATGAAGGGCGTCACGCAATTTCG
TGGGGACTAGTGATGTATCGCAAAGGGCATATGAAGTACACTTGTCCACG
GAAAGCCGTTGCGTGGCGGAATGGAGCCGTAAACAAGAGTGGCGTGTATG
CCAAAAGATTCCACAACGACGAGTCCCGGTACGATCGGACCTTCTGA
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Coding sequence (CDS) from alignment at CM002471.1:171601..172397-

>rna7261 ID=rna7261|Name=rna7261|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at CM002471.1:171601..172397- (Nannochloropsis gaditana)
CGAGGCATATTTCGGGAAACGCTGGCACGATGCATATTTGTGAAGATACC
AGCCACGAGGTTTGACCCGTCCTCTCCGTGCTGTTATAGCTTGTTGGCCT
GCTGGGGATGTCCCTCTACCAATGAAGGGCGTCACGCAATTTCGTGGGGA
CTAGTGATGTATCGCAAAGGGCATATGAAGTACACTTGTCCACGGAAAGC
CGTTGCGTGGCGGAATGGAGCCGTAAACAAGAGTGGCGTGTATGCCAAAA
GATTCCACAACGACGAGTCCCGGTACGATCGGACCTTCTGAATGGCGAAC
CGTACATGCATCCAGCGAGGCATATTTCGGGAAACGCTGGCACGATGCAT
ATTTGTGAAGATACCAGCCACGAGGTTTGACCCGTCCTCTCCGTGCTGTT
ATAGCTTGTTGGCCTGCTGGGGATGTCCCTCTACCAATGAAGGGCGTCAC
GCAATTTCGTGGGGACTAGTGATGTATCGCAAAGGGCATATGAAGTACAC
TTGTCCACGGAAAGCCGTTGCGTGGCGGAATGGAGCCGTAAACAAGAGTG
GCGTGTATGCCAAAAGATTCCACAACGACGAGTCCCGGTACGATCGGACC
TTCTGAATGGCGAACCGTACATGCATCCAG
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Synonyms
Publications