rna7260, rna7260 (mRNA) Nannochloropsis gaditana

Overview
Namerna7260
Unique Namerna7260
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1473
Alignment locationCM002471.1:170943..171236 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100238g3.1206.mrna
Orig protein idgnl|cribi|Naga_100238g3.1206
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:170943..171236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100238g3gene7025Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23430.1cds7243Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7260rna7260-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7260 ID=rna7260|Name=rna7260|organism=Nannochloropsis gaditana|type=mRNA|length=1473bp
ATGTGTGAGGAGGTACGCACCCGAGAACCGGTGTTCCTCGAGCTCGCATT
ACTCGCTTGGGTGCGCAACATCCTGTCCCTACCACAATCCTACGTGCTAA
GTCACACTGGAGCAACGAACATGGTCTCGGCTTCACCTTTACCACCTCCT
CCACCTGCGTCCCGGGCATTTCCCTCCTCAGTTCCTCCGGGACTCTCCCT
CCTCCGTCCCAGCACTCAGCTGCCGTTTGAGCGTCCTGACCCGCATGACG
AAGAATCTGCCACTCTGATTCGGAAACGTGATGGCACTGCTGACCCTTCA
GCCTCGTTCTCATCCTCGAGTCTGGGAGGCGATGTTCCCCTTGATGCGGC
CCTGGCACTTGGCAGCAGCACCAGCACCAGCACCGTCCCCATGAATCCGA
CTGACCACCTTGCGCACTCCACCACCATATCGGACGTGCATTTTATCGCG
GGCAACCACGCCGATTTCTATTTGTTGGGGTCCAAGGGCATTGGTGGCTC
GGAAAGCTTGGCCCAAGTCAAACGTGCCTTGCAAGAGCAGCGGCCGGACG
TGCTGCTCGTTCAAATCTGCCCCACCCGCCTCCGCCTCTTGCTTGACCCC
GATGCCTCCATTTGGAGCTACCTGATCGACATTCACGCCGCCATCAGCAG
CAGCAGCAGTGGCCAGGTCCTGGGTGTGGAAGGTGGTTTTAGCCCCTACC
ACATGTTGGCGGGAGCGACACCTCTCTTGAACTTTTCCCGTTTTTCCTCC
TTGGTGCTTGCCCGCCTGGTCTGGAAAGCCGTGGCTGTGTTGGTGGGGCA
ACGCCGGACGTTTGCGCACGAATTTGTGCAGAGCATCCGGTTGGCTGCCA
CTACCCCCGTTCCAGGCCACCACACCCGTGTCGTGCTGGGGGGGCGGGAT
CTGCCCACGACCTTGGCCCGCGCCTGGCTTTCCTTGTCCGCCTGGGACCG
TCTCGGAGTCGTCAAAGACGTGGCCTTGCTCTCCCTCCCTTGCCTGTCGG
GACGGACGGCTTGCCAGGCCCTCGGCCTCTCCCCCCCCTTTCTTCCCATA
CCGCGGGGCTCGGACGCCATGTCCCAAGTCCTTCGTTTCTTCGCCCATCG
GCATCCGTCCTTGGCGCCGTTGGAGAAAGAAGGAGGGGATTACTTCCTTT
CTTCCATGCAAAAGCTGGACAGACCTGTGTGTAGCCGGGAGGGAGGGCGG
GAGGGGACAGGGGAGGAAAGGATGGTAGTCTTGGCCGTTGTGGGCGCCTC
GTTGATACCTCACATCCAAAGGAATTGGGGGATTCCGGTGGACAGGCGCA
GGTTGATTTCTTGTCGGGGGCCCCGAGGAGGAGGTTGGGCGTGGCCCTGT
GTGGGTATGGTCATTCTGGTCCTTATAAGCTACATGCTGTGTCAAAGCAT
CCTCTTTCTCTCGGCGCCTTCTCAACAAACGTTTGGTGTGGTCCGGCACA
AGGACCCGAGCATGGCCTTTTGA
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protein sequence of rna7260

>rna7260-protein ID=rna7260-protein|Name=rna7260|organism=Nannochloropsis gaditana|type=polypeptide|length=97bp
MYGPSSSSRPRTTCTTKALQRIASDPPSLPLFKRGRHSPLTTYSWTHVSP
GLPTSFDPAPYEGAAKTWIKDGIAWKRDHLSWYHVAWLEESILSSKL
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mRNA from alignment at CM002471.1:170943..171236-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7260 ID=rna7260|Name=rna7260|organism=Nannochloropsis gaditana|type=mRNA|length=294bp|location=Sequence derived from alignment at CM002471.1:170943..171236- (Nannochloropsis gaditana)
ATGTATGGGCCGTCGTCCTCGTCCCGGCCCCGGACCACTTGCACCACAAA GGCCCTCCAACGCATTGCTTCAGACCCGCCCTCCCTCCCGCTCTTTAAAC GAGGTAGACATTCCCCTCTAACGACATACTCTTGGACCCATGTCAGCCCC GGCCTTCCCACTTCTTTTGATCCCGCTCCCTACGAAGGGGCTGCTAAGAC TTGGATAAAAGACGGTATTGCATGGAAGAGGGACCACCTGAGCTGGTACC ATGTTGCGTGGCTCGAAGAGTCAATTTTATCTTCCAAGCTGTGA
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Coding sequence (CDS) from alignment at CM002471.1:170943..171236-

>rna7260 ID=rna7260|Name=rna7260|organism=Nannochloropsis gaditana|type=CDS|length=294bp|location=Sequence derived from alignment at CM002471.1:170943..171236- (Nannochloropsis gaditana)
ATGTATGGGCCGTCGTCCTCGTCCCGGCCCCGGACCACTTGCACCACAAA
GGCCCTCCAACGCATTGCTTCAGACCCGCCCTCCCTCCCGCTCTTTAAAC
GAGGTAGACATTCCCCTCTAACGACATACTCTTGGACCCATGTCAGCCCC
GGCCTTCCCACTTCTTTTGATCCCGCTCCCTACGAAGGGGCTGCTAAGAC
TTGGATAAAAGACGGTATTGCATGGAAGAGGGACCACCTGAGCTGGTACC
ATGTTGCGTGGCTCGAAGAGTCAATTTTATCTTCCAAGCTGTGA
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Synonyms
Publications