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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100238g4.1205.mrna |
| Orig protein id | gnl|cribi|Naga_100238g4.1205 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:159509..161060 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7259 ID=rna7259|Name=rna7259|organism=Nannochloropsis gaditana|type=mRNA|length=1006bp
ACACGATGCGGACCTCACACATGTGTACGTCCTCCCGTTGCGTCCTGCTT
GGTGGGTGTCGGTGGGCAAGGTGGATGAGATGAAACTTGCCTTAGATATA
GCCGCCATATCACTGGAGGAGGAGGTTAAAAAGTCCTTGCAGAGCAGTAT
GGAAAAAACAAACAGCAGGACTGCATCACAGTAGTTTTCGATCCAATAAT
CTCGGAATCGTCATTTTTGTACGTCCATAAACACAGGTTGACAGGGTCGC
TGCTTTGTGTGTGGCCATAATCATGCAGCGTTTTTGGCCATATTTATTCA
TCCTCTCGCATCTCCATGTCCTTCTACCCAAGTGTCTTGGAGCGGGGGAT
ACGAACGTTTTATTGCTCAACCACGTATCCCGCGAATGCCGCAACCCCGA
AACAATGGCAGAATTCTACACCAGTGTCATGGGCTTCTCACGCGTGCCGG
CGCCCCCTTTCCCCTTTGTGACCATCTGGTTGTACCATCCCAGCGGTGTC
ACTATGCATCTCATCGAAGGTACGCCGGACTACGGCCTCGTGGAGGGGTC
CGCTCGTGACGCGTCCACAGGAAATTGTAGTCAGCATGTATTTATGCAAG
GAAACTTTGACCCAATCCATATCCGACGCGGTCACCATCTGGCCTGGACT
GTAAAAGACTTAGAAAGCATCAAGGCGGCGTTGGGCACCCGAGGAATTCC
CTTCGGAACGTCCACGGTACCAGGCACGGACACACGGCAAGTCTTTGCCT
TCGACCCCGAAGGAAACGGGCTGGAATTTGTGTATAAACCACCACCGAAC
CAGGAGCTGTGAAGAAACGGGAGGAAAAGACTTTGAAAGCAGACGATGAA
AGACACGAACCCCTCTGCCTGAGCGTTTCGGCATTATTCTCCTTCATTTC
ATTTTTTAAATAAGGCTAAACATTAATGCTTGCTCCCTTTGTACAATATT
TTCATTCAAATGCCGTCAGGCCCTCAATTTGTCATCGCTCCAAATCTAGG
CAAGCA back to topprotein sequence of rna7259 >rna7259-protein ID=rna7259-protein|Name=rna7259|organism=Nannochloropsis gaditana|type=polypeptide|length=490bp
MCEEVRTREPVFLELALLAWVRNILSLPQSYVLSHTGATNMVSASPLPPP
PPASRAFPSSVPPGLSLLRPSTQLPFERPDPHDEESATLIRKRDGTADPS
ASFSSSSLGGDVPLDAALALGSSTSTSTVPMNPTDHLAHSTTISDVHFIA
GNHADFYLLGSKGIGGSESLAQVKRALQEQRPDVLLVQICPTRLRLLLDP
DASIWSYLIDIHAAISSSSSGQVLGVEGGFSPYHMLAGATPLLNFSRFSS
LVLARLVWKAVAVLVGQRRTFAHEFVQSIRLAATTPVPGHHTRVVLGGRD
LPTTLARAWLSLSAWDRLGVVKDVALLSLPCLSGRTACQALGLSPPFLPI
PRGSDAMSQVLRFFAHRHPSLAPLEKEGGDYFLSSMQKLDRPVCSREGGR
EGTGEERMVVLAVVGASLIPHIQRNWGIPVDRRRLISCRGPRGGGWAWPC
VGMVILVLISYMLCQSILFLSAPSQQTFGVVRHKDPSMAF back to topmRNA from alignment at CM002471.1:159509..161060+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7259 ID=rna7259|Name=rna7259|organism=Nannochloropsis gaditana|type=mRNA|length=1552bp|location=Sequence derived from alignment at CM002471.1:159509..161060+ (Nannochloropsis gaditana)
ATGTGTGAGGTCCGCATCGTGTGGTAGACCATTCCTTTGACTAAACGTGG
AGCACGTGCTTTTTTTTTAGGCCCCACCAACTTGGCAGGAGGTACGCACC
CGAGAACCGGTGTTCCTCGAGCTCGCATTACTCGCTTGGGTGCGCAACAT
CCTGTCCCTACCACAATCCTACGTGCTAAGTCACACTGGAGCAACGAACA
TGGTCTCGGCTTCACCTttaccacctcctccacctgcgtCCCGggcattt
ccctcctcagtTCCTCCGggactctccctcctccgtcccagcACTCAGCT
GCCGTTTGAGCGTCCTGACCCGCATGACGAAGAATCTGCCACTCTGATTC
GGAAACGTGATGGCACTGCTGACCCTTCAGCCTCGTTCTCATCCTCGAGT
CTGGGAGGCGATGTTCCCCTTGATGCGGCCCTGGCACttggcagcagcac
cagcaccagcaccgtCCCCATGAATCCGACTGACCACCTTGCGCACTCCA
CCACCATATCGGACGTGCATTTTATCGCGGGCAACCACGCCGATTTCTAT
TTGTTGGGGTCCAAGGGCATTGGTGGCTCGGAAAGCTTGGCCCAAGTCAA
ACGTGCCTTGCAAGAGCAGCGGCCGGACGTGCTGCTCGTTCAAATCTGCC
CcacccgcctccgcctcttgctTGACCCCGATGCCTCCATTTGGAGCTAC
CTGATCGACATTCACGCCgccatcagcagcagcagcagtggccAGGTCCT
GGGTGTGGAAGGTGGTTTTAGCCCCTACCACATGTTGGCGGGAGCGACAC
CTCTCTTGAACTTTTcccgtttttcctccttggtGCTTGCCCGCCTGGTC
TGGAAAGCCGTGGCTGTGTTGGTGGGGCAACGCCGGACGTTTGCGCACGA
ATTTGTGCAGAGCATCCGGTTGGCTGCCACTACCCCCGTTCCAGGCCACC
ACACCCGTGTCGTGCTGGGGGGGCGGGATCTGCCCACGACCTTGGCCCGC
GCCTGGctttccttgtccgcctGGGACCGTCTCGGAGTCGTCAAAGACGt
ggccttgctctccctcccttgcctgtcGGGACGGACGGCTTGCCAGGCCC
tcggcctctcccccccctttcttcccataCCGCGGGGCTCGGACGCCATG
TCCCAAGTCCTTCGTTTCTTCGCCCATCGGCATCCGTCCTTGGCGCcgtt
ggagaaagaaggaggggattacttcctttcttccatgCAAAAGCTGGACA
GACCTGTGTGtagccgggagggagggcgggaggggacaggggaggaaagg
atggtaGTCTTGGCCGTTGTGGGCGCCTCGTTGATACCTCACATCCAAAG
GAATTGGGGGATTCCGGTGGACAGGCGCAGGTTGATTTCTTGTCGGGggc
cccgaggaggaggttgggcgTGGCCCTGTGTGGGTATGGTCATTCTGGTC
CTTATAAGCTACATGCTGTGTCAAagcatcctctttctctcggCGCCTTC
TCAACAAACGTTTGGTGTGGTCCGGCACAAGGACCCGAGCATGGCCTTTT
GA back to topCoding sequence (CDS) from alignment at CM002471.1:159509..161060+ >rna7259 ID=rna7259|Name=rna7259|organism=Nannochloropsis gaditana|type=CDS|length=2946bp|location=Sequence derived from alignment at CM002471.1:159509..161060+ (Nannochloropsis gaditana)
ATGTGTGAGGAGGTACGCACCCGAGAACCGGTGTTCCTCGAGCTCGCATT
ACTCGCTTGGGTGCGCAACATCCTGTCCCTACCACAATCCTACGTGCTAA
GTCACACTGGAGCAACGAACATGGTCTCGGCTTCACCTttaccacctcct
ccacctgcgtCCCGggcatttccctcctcagtTCCTCCGggactctccct
cctccgtcccagcACTCAGCTGCCGTTTGAGCGTCCTGACCCGCATGACG
AAGAATCTGCCACTCTGATTCGGAAACGTGATGGCACTGCTGACCCTTCA
GCCTCGTTCTCATCCTCGAGTCTGGGAGGCGATGTTCCCCTTGATGCGGC
CCTGGCACttggcagcagcaccagcaccagcaccgtCCCCATGAATCCGA
CTGACCACCTTGCGCACTCCACCACCATATCGGACGTGCATTTTATCGCG
GGCAACCACGCCGATTTCTATTTGTTGGGGTCCAAGGGCATTGGTGGCTC
GGAAAGCTTGGCCCAAGTCAAACGTGCCTTGCAAGAGCAGCGGCCGGACG
TGCTGCTCGTTCAAATCTGCCCcacccgcctccgcctcttgctTGACCCC
GATGCCTCCATTTGGAGCTACCTGATCGACATTCACGCCgccatcagcag
cagcagcagtggccAGGTCCTGGGTGTGGAAGGTGGTTTTAGCCCCTACC
ACATGTTGGCGGGAGCGACACCTCTCTTGAACTTTTcccgtttttcctcc
ttggtGCTTGCCCGCCTGGTCTGGAAAGCCGTGGCTGTGTTGGTGGGGCA
ACGCCGGACGTTTGCGCACGAATTTGTGCAGAGCATCCGGTTGGCTGCCA
CTACCCCCGTTCCAGGCCACCACACCCGTGTCGTGCTGGGGGGGCGGGAT
CTGCCCACGACCTTGGCCCGCGCCTGGctttccttgtccgcctGGGACCG
TCTCGGAGTCGTCAAAGACGtggccttgctctccctcccttgcctgtcGG
GACGGACGGCTTGCCAGGCCCtcggcctctcccccccctttcttcccata
CCGCGGGGCTCGGACGCCATGTCCCAAGTCCTTCGTTTCTTCGCCCATCG
GCATCCGTCCTTGGCGCcgttggagaaagaaggaggggattacttccttt
cttccatgCAAAAGCTGGACAGACCTGTGTGtagccgggagggagggcgg
gaggggacaggggaggaaaggatggtaGTCTTGGCCGTTGTGGGCGCCTC
GTTGATACCTCACATCCAAAGGAATTGGGGGATTCCGGTGGACAGGCGCA
GGTTGATTTCTTGTCGGGggccccgaggaggaggttgggcgTGGCCCTGT
GTGGGTATGGTCATTCTGGTCCTTATAAGCTACATGCTGTGTCAAagcat
cctctttctctcggCGCCTTCTCAACAAACGTTTGGTGTGGTCCGGCACA
AGGACCCGAGCATGGCCTTTTGAATGTGTGAGGAGGTACGCACCCGAGAA
CCGGTGTTCCTCGAGCTCGCATTACTCGCTTGGGTGCGCAACATCCTGTC
CCTACCACAATCCTACGTGCTAAGTCACACTGGAGCAACGAACATGGTCT
CGGCTTCACCTttaccacctcctccacctgcgtCCCGggcatttccctcc
tcagtTCCTCCGggactctccctcctccgtcccagcACTCAGCTGCCGTT
TGAGCGTCCTGACCCGCATGACGAAGAATCTGCCACTCTGATTCGGAAAC
GTGATGGCACTGCTGACCCTTCAGCCTCGTTCTCATCCTCGAGTCTGGGA
GGCGATGTTCCCCTTGATGCGGCCCTGGCACttggcagcagcaccagcac
cagcaccgtCCCCATGAATCCGACTGACCACCTTGCGCACTCCACCACCA
TATCGGACGTGCATTTTATCGCGGGCAACCACGCCGATTTCTATTTGTTG
GGGTCCAAGGGCATTGGTGGCTCGGAAAGCTTGGCCCAAGTCAAACGTGC
CTTGCAAGAGCAGCGGCCGGACGTGCTGCTCGTTCAAATCTGCCCcaccc
gcctccgcctcttgctTGACCCCGATGCCTCCATTTGGAGCTACCTGATC
GACATTCACGCCgccatcagcagcagcagcagtggccAGGTCCTGGGTGT
GGAAGGTGGTTTTAGCCCCTACCACATGTTGGCGGGAGCGACACCTCTCT
TGAACTTTTcccgtttttcctccttggtGCTTGCCCGCCTGGTCTGGAAA
GCCGTGGCTGTGTTGGTGGGGCAACGCCGGACGTTTGCGCACGAATTTGT
GCAGAGCATCCGGTTGGCTGCCACTACCCCCGTTCCAGGCCACCACACCC
GTGTCGTGCTGGGGGGGCGGGATCTGCCCACGACCTTGGCCCGCGCCTGG
ctttccttgtccgcctGGGACCGTCTCGGAGTCGTCAAAGACGtggcctt
gctctccctcccttgcctgtcGGGACGGACGGCTTGCCAGGCCCtcggcc
tctcccccccctttcttcccataCCGCGGGGCTCGGACGCCATGTCCCAA
GTCCTTCGTTTCTTCGCCCATCGGCATCCGTCCTTGGCGCcgttggagaa
agaaggaggggattacttcctttcttccatgCAAAAGCTGGACAGACCTG
TGTGtagccgggagggagggcgggaggggacaggggaggaaaggatggta
GTCTTGGCCGTTGTGGGCGCCTCGTTGATACCTCACATCCAAAGGAATTG
GGGGATTCCGGTGGACAGGCGCAGGTTGATTTCTTGTCGGGggccccgag
gaggaggttgggcgTGGCCCTGTGTGGGTATGGTCATTCTGGTCCTTATA
AGCTACATGCTGTGTCAAagcatcctctttctctcggCGCCTTCTCAACA
AACGTTTGGTGTGGTCCGGCACAAGGACCCGAGCATGGCCTTTTGA back to top
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