rna7245, rna7245 (mRNA) Nannochloropsis gaditana

Overview
Namerna7245
Unique Namerna7245
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length864
Alignment locationCM002471.1:112237..112612 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100594g1.9593.mrna
Orig protein idgnl|cribi|Naga_100594g1.9593
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:112237..112612 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100594g1gene7010Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7245rna7245-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23445.1cds7228Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7245 ID=rna7245|Name=rna7245|organism=Nannochloropsis gaditana|type=mRNA|length=864bp
GATACAGGTGCATTGGCGGGACGTGGTTGGCTTGCTGTTCAAGTGCTGGT
GCTTTGCCGCCTCCTACTAGGAGCTTCAAGGCTGCATCATGAAAGCTTTC
TTGCGCCCAGAGTATGCAAAAAGGACAAAGCTGCCGTGGCTCCACGTCTT
TGTGTGTTGTCTAGGCGTTTTTTGCCTCCTCCCTGACATAAAAGCCTTCT
CTCCCTGCCTCCACCTCCCCGGCTCCTCCTTCCTACCTACCGTATTGGAG
CCACAAGCCCGCCTGGGTGGTCGAGGACGAAGAATAAGGGTAGGAACATG
CCTACAATGTGAAAACTACGAACATGGAGCCCATGGAGCCGTGCAATCGT
CGCACGAAGGACAGACTGATCATGTTTGCCAGGGCAAGCCAGCATTGACA
TGCAATGAAGACCCCGTGGTAACAAAAAAGGGCGAGAAGAGGGGCCTGGA
CAGGGTGCGTTCCTCCAAGGGCCTTCCAGGAAGGGAAGAGGGAGAAGGAG
GGAATGTGGTCGAGCTCTTGAAAGCCAGCAGCGCTGTCCTCTTGGCGGCG
ATAGGACCGAATCCATGGGACAGAGGCCTGGGCATCAACCCGACCCCGCC
GAGCGCCTTGGCCATGTGGGGGCCTTACGTCGGGACGCTCCTCTTCCTCA
CATTTGGGATGCGGGGGCTGGAGCCACTGAAGCGCTTCCTCTACGACCGG
CAGAAACGGAGGAAGCAGGCGAAGAAGGCCGCCCAAAAGCCCAAGAAGAA
CCAGTACTACCGCACCCCTTCCCGGCTCTACGACCTGGCCAAGGCCAAGC
TTGAGCAGAGGCAGGAGGGAGGGACGGAAGCAGTCGAAGGGACCTCGGAT
ACGGCTGCCAGTGG
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protein sequence of rna7245

>rna7245-protein ID=rna7245-protein|Name=rna7245|organism=Nannochloropsis gaditana|type=polypeptide|length=89bp
MYIYTRIYTCIYVAVMAGASVGKGWLWLEEGRRWTRGGNEEGRGGRNGPW
WKDACGKSLFEGTDFLRSHMLAQWEGDGRIRRPGVEGRI
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mRNA from alignment at CM002471.1:112237..112612+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7245 ID=rna7245|Name=rna7245|organism=Nannochloropsis gaditana|type=mRNA|length=376bp|location=Sequence derived from alignment at CM002471.1:112237..112612+ (Nannochloropsis gaditana)
atgtatatatataccCGTATATATACATGCATATATGTAGCTGTCATGGC
AGGTGCGAGCGTGGGAAAGGGCTGGCTCTGGcttgaggaggggaggcggt
ggacgagggtGTGTGACTGTCAGGCATAGGCATCTTTTATGCCGCACact
ggtggaggggaaagaggtggaaCAACAATGCTGTCTTTGCCGTGGAAAGG
GTGAAATAAAatagggagggaatgaggaaggaagggggggtagGAACGGC
CCATGGTGGAAGGATGCCTGCGGGAAGAGTCTCTTCGAAGGCACCGACTT
TCTCCGCTCTCACATGCTGGCGcagtgggaaggagacggaagaattaggc
gacccggagTTGAAGGACGGATTTAA
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Coding sequence (CDS) from alignment at CM002471.1:112237..112612+

>rna7245 ID=rna7245|Name=rna7245|organism=Nannochloropsis gaditana|type=CDS|length=540bp|location=Sequence derived from alignment at CM002471.1:112237..112612+ (Nannochloropsis gaditana)
atgtatatatataccCGTATATATACATGCATATATGTAGCTGTCATGGC
AGGTGCGAGCGTGGGAAAGGGCTGGCTCTGGcttgaggaggggaggcggt
ggacgaggggagggaatgaggaaggaagggggggtagGAACGGCCCATGG
TGGAAGGATGCCTGCGGGAAGAGTCTCTTCGAAGGCACCGACTTTCTCCG
CTCTCACATGCTGGCGcagtgggaaggagacggaagaattaggcgacccg
gagTTGAAGGACGGATTTAAatgtatatatataccCGTATATATACATGC
ATATATGTAGCTGTCATGGCAGGTGCGAGCGTGGGAAAGGGCTGGCTCTG
Gcttgaggaggggaggcggtggacgaggggagggaatgaggaaggaaggg
ggggtagGAACGGCCCATGGTGGAAGGATGCCTGCGGGAAGAGTCTCTTC
GAAGGCACCGACTTTCTCCGCTCTCACATGCTGGCGcagtgggaaggaga
cggaagaattaggcgacccggagTTGAAGGACGGATTTAA
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Synonyms
Publications