rna7239, rna7239 (mRNA) Nannochloropsis gaditana

Overview
Namerna7239
Unique Namerna7239
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length869
Alignment locationCM002471.1:92658..94514 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100986g1.8462.mrna
Orig protein idgnl|cribi|Naga_100986g1.8462
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:92658..94514 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100986g1gene7004Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23452.1cds7222Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7239rna7239-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7239 ID=rna7239|Name=rna7239|organism=Nannochloropsis gaditana|type=mRNA|length=869bp
GAAAGTGAGACGAAGGCGGGATCGGAAGCGTCGCACCTTTGTCATTTATA
CACCTCTTTAGTTATCAGCACTTGCGTCCCCCCCCCCCCCCTTCTTCCCT
CCCTCCTTCCCTTCCTTGCCCACCCCAGGCTATCCAAACGGGAACTTCCT
GGGCCCGTCCCTCCTCCTCTTTTCCTCCGCCGCTATGGCGGCTCGCAACG
TGGCCTACAGGGAAGAGATCTTCGCCCCGGTGCTGAACGTGGTCTGTGTG
GACAGCTTGGAGGAGGCGATCCAGTTCGTCAATGCCAGTCCCTATGGGAA
TGGCACCGCGATTTTCACCTCTTCGGGGGCAGCGGCGCGAAAATATCAGA
AGGAAATCGACGTCGGACAGGTCGGGATCAACGTACCTATCCCTGTTCCT
CTTCCTTTCTTCTCTTTCACCGGCTCCCGGGGCTCTTTGCGGGGAGACTT
GCACTTTTACGGAAAACAGGGCGTGGCGTTCTACACGCAAACTAAGACTA
TCACGAGCAATTGGCAGTTCCATGCGGCGAGCGCCCAGGCTGCCTCTAGC
ATGCCTACTTTGAAATAGGGAGAGAAGGGGAAGAGGAAGGAGGAGGGGAG
GGAGAAGGGGGGGAGGGAGGAGGAGGGGAGGGAGAAGGGGGGAGGGCATC
GCCTGTTCAAGAGGAGCGGAGGGGGGGGGAAGGAGGGGAGAGGAGGCCAT
AGGATTGGGCTGTGGAGTTGTTGTACATAGGACGGGTGGTGGGGAAGGAA
CGGGGGGGAAGAAACGATAGGAAGGCTGTTAGGGTTAGGGTAAGGGTCCA
TCTGCGTGGAGCGAGTGAATGGGTGAACAAGTCGACAAAAAGGATAAATG
GAAGTAATCCCCGATGGGG
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protein sequence of rna7239

>rna7239-protein ID=rna7239-protein|Name=rna7239|organism=Nannochloropsis gaditana|type=polypeptide|length=234bp
MSPISDPSQKEVNSQPTFSRQADPQRVAFTLTWTFGRKPTAVPRPGGGGG
LLGPFRRQPYLVLPSFLWPNCRSPSVRGRSSGYSLHLHHQHPVHDTFLPR
RLPPVLLLLVFLRPGLLGHHGHSLPPPKRVRGSRQGHRKDVSSQSQPQRP
PPSVTDHSGPWFFLLRFPPLAFRGLLRRMCDVPRPSRPPGVRCRWLGPLS
QPLPTRALPQSDIPPGTRRRSRAGMGGRERGREN
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mRNA from alignment at CM002471.1:92658..94514-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7239 ID=rna7239|Name=rna7239|organism=Nannochloropsis gaditana|type=mRNA|length=1857bp|location=Sequence derived from alignment at CM002471.1:92658..94514- (Nannochloropsis gaditana)
GGAGATCCACAGGCGAACAAGCGAGGGCGGGAAGACAAGGGCAGGCCCCA
TGCAGGGTCTTGGACGGCGCATAGTAGCCCTTTAGTCGCCGGGCGTCGCT
TTCCTGCCCCGCTCTTCTCCCCCGCGTCCCCCTCCTCGGCCAGTCCTCCC
TCCCTCCCTCCCTCCCGCCACGCCTGCTCCTCCCCCTCCTCGCTCGCACA
CCTGGCCTCCATGCCCCTCCCCACCCATGAGCCCCATTTCGGATCCCTCT
CAAAAGGAAGTCAACAGCCAGCCCACCTTCTCCAGGCAGGCGGATCCACA
GCGGGTTGCCTTCACCTTAACATGGACGTTCGGACGGAAACCTACTGCGG
TTCCTCGCCCCGGGGGGGGGGGCGGACTTCTTGGCCCTTTTCGCCGCCAG
CCATATCTCGTCCTCCCTTCCTTTCTCTGGCCTAACTGTCGAAGCCCCTC
CGTACGTGGCAGGAGCAGCGGGTATTCCCTCCACCTGCACCACCAGCACC
CTGTCCATGACACCTTCCTCCCCCGGCGCCTCCCCCCCGTCCTCCTCCTC
CTCGTCTTCCTCCGACCCGGCTTGCTCGGACACCACGGACATAGCCTCCC
TCCTCCAAAACGTGTGCGAGGAAGCAGACAAGGACACCGGAAAGATGTGT
CATCCCAGTCGCAGCCCCAGCGACCCCCACCCTCCGTCACAGACCACTCG
GGCCCATGGTTTTTCCTCCTCCGCTTTCCCCCCCTCGCCTTTCGGGGCCT
TCTACGCCGCATGTGCGATGTCCCCCGCCCATCCCGGCCTCCCGGCGTCC
GCTGTCGCTGGCTTGGTCCCCTCTCCCAGCCCCTCCCCACGAGGGCTCTA
CCTCAATCCGATATCCCTCCAGGCACCCGGAGGAGGAGCAGGGCAGGAAT
GGGAGGGAGGGAGAGAGGGAGAGAAAACTGACGACAGTGACGCTTTCTTT
GCGTCCCCTTCTCCCCGATGAACGCGAGGAGGGGAGGACTGGCTGTAGCC
CAGGCGGAGGATGACGGATAGTAAGACAGAAGCCGCACTCCCAGGGAGGT
TGCGGAGGAAAAGGAGGAGGGGAAGGGACTTGCTGACGCCGGCCCTCGTC
CACTCGCTCGATGGCCCCCCTTTCGCTTCGAATTGTACGAAATTGAATGG
GCGAAGGACCGGCGATGATAGTGTCGCGAGGGAGAAGAGGTTTCAGGGGG
CCAGGTGCTTGCGTCGAAAGGGTCTGAAGCAGAGTGGATGGATGGACGGT
TTAGACAGGTTCCTGGCAGCACAGATGTGACGATCGATAGTCAGAGAGAG
AGAAAAGAAGGACGAAGAAATGAGAAGATAGCACGCCATATTTCACATTT
AAAATAGCGCGGACGAGGCGCCCAGGAAGCCTCGGGAAAAGCAGCCGGCA
TGACAACGGCCTTCCCCTTAAATATTTACCGAGAGAGGGGGAAGCGGGAT
TGATATGAGGACACCTGACAGTGAAAATGAAAGTGATTGCGCAAACGCAA
AAATTGCAAGCAGTACAGCACAGGTACGAAAGAACATAAGTAGGGAAAGC
ACATGACTGAGGGGGTAAATCCGGGTATTGAAAGGCCAACCTGAGTGTTA
AGAAGGGACGCATATGCCAAGACCAAGTGGGACGCATGTGAAGTTAGAGG
TTTGGGAAGAGGATGGGAGGAGCACGGTGGAGTAGGAGATGATATCTTGG
GTTGGAAGGGGCGGTGAGGCGCACGCCAGCCGGGCTCCTTTTGGTTAGTG
TGATTCAGCCCTCGATGCATAGGCGGTCCCGAGGGAGGGAGGGACGGGGG
CCTCCGGCATGACAGTGGGCCATCGGGTATTCAAAGAAATGTCATCACGC
TTGGTTT
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Coding sequence (CDS) from alignment at CM002471.1:92658..94514-

>rna7239 ID=rna7239|Name=rna7239|organism=Nannochloropsis gaditana|type=CDS|length=705bp|location=Sequence derived from alignment at CM002471.1:92658..94514- (Nannochloropsis gaditana)
ATGAGCCCCATTTCGGATCCCTCTCAAAAGGAAGTCAACAGCCAGCCCAC
CTTCTCCAGGCAGGCGGATCCACAGCGGGTTGCCTTCACCTTAACATGGA
CGTTCGGACGGAAACCTACTGCGGTTCCTCGCCCCGGGGGGGGGGGCGGA
CTTCTTGGCCCTTTTCGCCGCCAGCCATATCTCGTCCTCCCTTCCTTTCT
CTGGCCTAACTGTCGAAGCCCCTCCGTACGTGGCAGGAGCAGCGGGTATT
CCCTCCACCTGCACCACCAGCACCCTGTCCATGACACCTTCCTCCCCCGG
CGCCTCCCCCCCGTCCTCCTCCTCCTCGTCTTCCTCCGACCCGGCTTGCT
CGGACACCACGGACATAGCCTCCCTCCTCCAAAACGTGTGCGAGGAAGCA
GACAAGGACACCGGAAAGATGTGTCATCCCAGTCGCAGCCCCAGCGACCC
CCACCCTCCGTCACAGACCACTCGGGCCCATGGTTTTTCCTCCTCCGCTT
TCCCCCCCTCGCCTTTCGGGGCCTTCTACGCCGCATGTGCGATGTCCCCC
GCCCATCCCGGCCTCCCGGCGTCCGCTGTCGCTGGCTTGGTCCCCTCTCC
CAGCCCCTCCCCACGAGGGCTCTACCTCAATCCGATATCCCTCCAGGCAC
CCGGAGGAGGAGCAGGGCAGGAATGGGAGGGAGGGAGAGAGGGAGAGAAA
ACTGA
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Synonyms
Publications