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Properties
| Property Name | Value |
|---|
| Product | fg-gap repeat domain protein |
| Orig transcript id | gnl|cribi|Naga_100415g4.10373.mrna |
| Orig protein id | gnl|cribi|Naga_100415g4.10373 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:80888..84301 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7236 ID=rna7236|Name=rna7236|organism=Nannochloropsis gaditana|type=mRNA|length=1673bp
ACCTTTTCCGGTCCTCGGACCCTCGCCCTCCCTCCGCCCCCTCCCTCCCC
CCCTCAGGCTTCAAGGACTGCTGGCGGTGTCCGATAAGCCCCGACCCGAT
GCGGCTCGCACCGTCGCGGCATTGCACCGCATGGGGATCCAGGTCTGGAT
GTTGACGGGCGATTCGCGGGCGGCGGCAGAGGCGGTGGCGCACAGCATCG
GCATCAAGCACGTGCAGGCGGGGACCCTGCCCGGGCAGAAGGCCAAGAAA
ATTCAGGCACTGCAGGCTCGAGGCCATCGAGTCTGTATGCTGGGAGACGG
GATCAACGACTCGCCGGCATTGGCCCAGGCGGACGTGGGGGTGGCGATTG
GAACCGGGGCACAGGTGGCCTGTGAGGCTGCGGACCTCATCCTCCTCCAC
AACTCCCTCCCTGACCTGGTGACCGCCTTGCACCTGGCGCGGACGGTCTT
CCGTCGCATCCAGCTCAACATGCTGTGGGCGCTCGGTTACAATTTAATCG
GCATTCCTTTCGCGGCCGGTGCCTTTTTGCCCATTTTGGGCTGGCGCCTT
CCTCCGGGCTACTCGGGTGCGTGCTCGTCGTTGCCGGCTCGTGCGAGTCG
CTTGCCTCGTCTTGCCAGGGACGTGATGTGTTGGCTCACTCTCTCCACTC
TCCCCCCCCCCTTCGGTCTCTCGGTCTCTCCCCTCCCCCCCCCCCTCCAA
AAAAGGTCTGGCCATGACTATGTCCTCCCTCTCTGTCGTCATCTCCTCCT
TGGCCCTCCGCTTCTACCAACGGCCCGACTTGGACAAAGTTGGCTCGATT
TTTGCCCGGCATGGGCGAGAAAGACGGGAGAGGAGGGAAAGGACAGCCTC
GCAGCTGCAGCCATTGGTGCTGGGGGAAGTGGAGCGGGAGGAAGACGAGG
AAGAGGGCAGGAGGAGAGGAATGAGCCGAGGGCGTCTGGATTCAGGTAAG
GATGCGGACTATCCTTTCTCGCAGGACTGTGTCTCAGTTGAGATTGTTTC
GTGGGGTCTCAACGGGTGTCGGGACACTGCAAATTGTCATGTCGGGACGT
TCTGGAGGGACTTGTTGAGCTTGCGTAAGGTCTGCCATACAGCACTGTCT
TTCACGGCTGTGAATTCGCCCCTGCAAATAAGCCTTTGCTCAAATGCGAC
ATATTTTAAATCATGACAGACGATTCTATGGGGTCTTCCATCTCGCTGGC
GTCGGAGCGTGCTCGCTCTCACACCATGAACACAGTCACATCCCACCTAT
CAAGAGCTTCTCGGCTGTGGCAACGCATGCGAGGTTACATGCATTTGGAC
GGTGAACAAGGATTTGAGAGTGTTTGGGACAGGAACAGAGGAATGCTGGC
ATCTTTGTCGCCTCTGGGTGGGATTAGAGGGCCGGGAAGGGGGAACACAG
GGAGAAGCATAGATATGGTGCGCCTGTCCCGAGAGTCCGATGGAGGACAT
CGCGAAACAGTATAAGGATTTAATTTTCGGGTAGAAGAGGGAAGAAATGT
AGCAAATGTCATATACTCAAAGCATAAAACATGCCCCTTGCTGACAAAGA
TTTGAAATAAAAAATCGACTTGAACTTTGCCGGATTCGACCTTTAAGGAC
AGTTGTAGGATTGTCCTTTCTTCCCGTTGTTATGACAGTAAGCGAAACAA
GCCGCGGACAGGACAGACTGGTG back to topprotein sequence of rna7236 >rna7236-protein ID=rna7236-protein|Name=rna7236|organism=Nannochloropsis gaditana|type=polypeptide|length=760bp
MDYLSGSRKASGTTGDANDINSSGLVFRGRTPRTPSNPNGFDAQVDIETQ
QPGIGMSNSSSHGVSRNSAGSGASAGLPYMQQHSMQHGSSSTAASQWQTN
TQNERTVVAPPRRGTSLSSSVSTYEDDKNKKFRSSFSSPASASLSQGQSA
FRSLFIGACLTCGLLGILSTVGFFNRGKTNSYVYTRPRSSSYASPAVLDP
EDFDVPLPPKRALRGSVHNQVVTSEGSRIVQSHIDHHHSRVILIPSHEPF
TRRNVHHFAQHGARLGTNTHRNETGNARAIHVDDMEEFVEDRREYVRHPN
DVLLRDEDLHAMEATAHFPYPFITNGDVHKIEVAHGVDDHHDADSHDYFG
SSMVNMGYNPATKLTTLAVGAPGALDTSGAIYFMDVNREGDVENYSYLTH
EDFVETVGGGTGGSVSFGKAWGPNSALGWALENVGDLDGDGVNDLAVGAL
GYPAGNSKGAVFIFFLTAEHEIKSYKVITEGVGGFPHQLNQHWRFGSSLS
RLGDLDGDGVTELAVGAMGMGKERGGVFVLFMNKDGTVKNTHLIASLRGW
DHKLVVQDQFGSAVRGMGDLDGDGVPDMVVSGDGFPAGESYGAVWVLFLN
VDGSVKYWRRLDEFDPLLEPEALFGASLASLGDLDGDGRQELLIGAPGLH
ELRGEAFIVSLDKEGRVRHYKTVTDSDSDLEAVISSNDEFGWSVTSLGDL
DGDGVPDLAVAAETSPGETNHPSLYMLFLAKQDEGPGAAGAARAMEEKGA
AAQETKRRLR back to topmRNA from alignment at CM002471.1:80888..84301+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7236 ID=rna7236|Name=rna7236|organism=Nannochloropsis gaditana|type=mRNA|length=3414bp|location=Sequence derived from alignment at CM002471.1:80888..84301+ (Nannochloropsis gaditana)
TCGCCCAAATTTAAAAAATTGAAAGGAGTAACGGCCGTGCCGCTTCGTAG
ATCTTCCTGCCCAACGGAACAAAGGGTTCGCAAAATAGATCTTTCCTCTG
ACACTCCATTCTCTGGAGAGCCCTGTGCCATGTTAATGTAGCATATCATG
GATAAATAGATGCTTAAAGTTGTAAACGTGGAGTGGAAGAGGTGCTTTCG
AGGAGTGGTAGCCAGATAACTTTTACTTGACGCCTTTCATCGAATGTCGC
ATCGGATGGCGTCGCTAGTCGCTCAATCAAACCACTCGCGTTCCTGTGCC
TATTTTAGAAAGATGTTGTTCTTGCAAGCATTCTACATGATGCCTCTCCC
TATCTTGACTTTGCCATCTGTCCATAATGTCCTTAAAGTTTTACATTCAT
CGAGATCACTTATCTTTCTAAAACAGGGCAGCGGCTGAAGTACTTTCCAA
GGCATCGACGGTATTTATGGATTATCTCTCAGGTTCACGTAAAGCAAGCG
GTACAACTGGAGATGCGAACGACATCAATTCATCGGGACTGGTGTTTCGA
GGGCGCACGCCGCGGACGCCGTCAAATCCGAATGGTTTTGACGCACAGGT
TGATATTGAGACCCAACAACCGGGCATTGGAATGAGCAATAGTAGTAGCC
ACGGAGTGAGCCGCAACAGTGCAGGATCGGGTGCAAGCGCAGGTTTGCCG
TACATGCAGCAGCATTCGATGCAGCACGGCTCAAGTTCCACCGCTGCTTC
ACAGGTACGCGCTTTGgctaggaagggagggatccaCGAGGAAGACTGGT
TACCATTATCCGTCTGACATTCACCAACCCCTTTGATCGTAGGATCTGCT
TGTCATTTACTTGtcatctttccccccttccgtcATCCATTTGTTTTCCT
GATCCATCGACATCCAATTGATCGGTCCTGTTCCTCCACACTGCATCCTT
ACAGTGGCAAACCAATACCCAAAATGAGCGTACAGTAGTCGCCCCGCCCC
GTCGCGGTActtccctgtcctcttccgTTTCGACGTACGAAGACGACAAG
AACAAGAAATTCcgatcctccttctcctcccctgcctctgcctccctaTC
CCAGGGCCAGAGCGCCTTTCGAAGCCTTTTCATCGGCGCCTGTCTCACCT
GTGGTTTGCTGGGTATCCTCTCCACCGTAGGGTTCTTCAACCGAGGCAAG
ACGAACTCGTATGTCTACACCCGACCTCGATCCTCCTCTTACGCTTCACC
TGCCGTCCTTGATCCGGAGGATTTCgacgtccccctcccgcccaaaCGCG
CCTTGCGGGGCTCGGTCCACAACCAGGTGGTCACCAGCGAAGGTAGTCGC
ATCGTCCAGTCGCACATCGACCACCACCATTCCCGCGTCATTTTGATCCC
GTCCCACGAACCTTTCACGCGCCGCAATGTCCATCACTTTGCCCAGCATG
GGGCGCGCTTGGGGACAAACACCCACCGGAACGAAACCGGGAATGCGCGG
GCCATTCATGTGGACGACATGGAAGAGTTTGTAGAGGACCGGCGAGAGTA
CGTCCGGCACCCCAACGACGTGCTCCTCCGAGACGAAGACTTGCATGCCA
TGGAAGCCACAGCGCATTTCCCCTACCCTTTCATCACGAACGGAGACGTG
CACAAAATCGAGGTCGCCCACGGCGTGGATGACCACCACGACGCCGACTC
CCACGACTACTTCGGCTCCTCCATGGTCAACATGGGCTACAACCCCGCCA
CGAAACTGACCACCCTGGCGGTGGGCGCCCCGGGGGCCCTGGACACGAGC
GGGGCCATTTATTTCATGGACGTGAACCGGGAGGGCGACGTGGAGAACTA
CTCCTACCTGACGCACGAGGACTTTGTGGAgacggtggggggagggacgg
ggggctCGGTGTCCTTTGGGAAAGCGTGGGGCCCCAATTCGGCGCTGGGC
TGGGCGCTGGAAAACGTGGGGGACTTGGACGGGGACGGGGTCAACGACTT
GGCGGTGGGCGCGTTAGGATACCCGGCGGGGAACTCGAAGGGGGCCGTTT
TCATCTTCTTTCTGACCGCCGAGCACGAGATCAAGAGCTACAAGGTGATC
ACCGAGGGTGTCGGGGGCTTCCCTCACCAATTGAACCAGCACTGGCGCTT
cgggtcctccctctcgcgccTGGGAGACCTGGACGGCGACGGGGTGACGG
AGCTGGCAGTAGGGGCGATGGGCATGGGAAAAGAGCGGGGCGgggtcttc
gtcctctttaTGAACAAGGACGGGACGGTCAAAAACACGCATCTGATCGC
GTCCTTGCGCGGTTGGGACCACAAGCTGGTCGTGCAGGATCAATTTGGCT
CCGCCGTCCGGGGGATGGGCGACCTCGACGGGGACGGAGTGCCCGACATG
GTCGTCTCGGGCGATGGCTTCCCCGCGGGCGAAAGCTACGGGGCAGTCTG
GGTCCTCTTTTTGAACGTGGACGGCTCGGTCAAGTACTGGCGGCGCCTGG
ACGAATTCGACCCGCTGCTGGAGCCTGAAGCCCTGTTTGGAGCTTCCTTG
GCATCCTTGGGGGATCTGGATGGGGACGGACGGCAGGAGCTCCTGATCGG
CGCCCCAGGCCTGCATGAATTGAGGGGAGAAGCCTTCATTGTCTccctgg
acaaggaaggcCGCGTGCGGCATTACAAGACCGTCACCGATTCCGACTCg
gacctggaggcggtgATTTCTTCCAACGATGAATTTGGATGGTCGGTGAC
AAGTCTGGGCGACCTGGACGGGGACGGAGTGCCGGACCTCGCCGTAGCGG
CAGAAACCTCGCCGGGGGAGACCAATCATCCCTCGCTCTACATGCTTTTC
TTGGCAAAGCAGGACGAAGGGCCTGGGGCAGCGGGTGCCGCCCGggcaat
ggaggagaagggagcggCGGCACAGGAAACCAAACGTCGTTTGCGATGAG
CACGTGGCATAGGAACGGCGCCTGGTGCCTGGCCCCAGGATTGAAGTGAT
GGATAAGGCGACACAAAAAAGGGACATgcgggaggatgaagggctGGAGA
TGGATGCGGCCAGCGAAAAGagatggggaagagaaaagagagtggcgagg
gacggaggcgTCGGGCAGAATGCGGCAGGATGGCCGGCATACATGTGCAG
TGCTGACGGGACGGATACACCGATTGCGATGGGGTTGACGTGTGTTGTGA
CGTACTGTTGTTACTGAATGGTGGAGTCGTTGGGGATGTACGGTTCATGT
CATAGTAGAAAACGTTTCTGATTTTCCTCTACAGCTCTGCATTGTGCAGT
GGTATTGAAAGGGGTCATTCAAAAATCAACATAATAGTGGCAATGCTGGA
GGCTTAAAAATATGATCGACAAGCAACAATAAGTGCTGAAATATCAGGAG
CATTCGGTTTCATC back to topCoding sequence (CDS) from alignment at CM002471.1:80888..84301+ >rna7236 ID=rna7236|Name=rna7236|organism=Nannochloropsis gaditana|type=CDS|length=4566bp|location=Sequence derived from alignment at CM002471.1:80888..84301+ (Nannochloropsis gaditana)
ATGGATTATCTCTCAGGTTCACGTAAAGCAAGCGGTACAACTGGAGATGC
GAACGACATCAATTCATCGGGACTGGTGTTTCGAGGGCGCACGCCGCGGA
CGCCGTCAAATCCGAATGGTTTTGACGCACAGGTTGATATTGAGACCCAA
CAACCGGGCATTGGAATGAGCAATAGTAGTAGCCACGGAGTGAGCCGCAA
CAGTGCAGGATCGGGTGCAAGCGCAGGTTTGCCGTACATGCAGCAGCATT
CGATGCAGCACGGCTCAAGTTCCACCGCTGCTTCACAGTGGCAAACCAAT
ACCCAAAATGAGCGTACAGTAGTCGCCCCGCCCCGTCGCGGTActtccct
gtcctcttccgTTTCGACGTACGAAGACGACAAGAACAAGAAATTCcgat
cctccttctcctcccctgcctctgcctccctaTCCCAGGGCCAGAGCGCC
TTTCGAAGCCTTTTCATCGGCGCCTGTCTCACCTGTGGTTTGCTGGGTAT
CCTCTCCACCGTAGGGTTCTTCAACCGAGGCAAGACGAACTCGTATGTCT
ACACCCGACCTCGATCCTCCTCTTACGCTTCACCTGCCGTCCTTGATCCG
GAGGATTTCgacgtccccctcccgcccaaaCGCGCCTTGCGGGGCTCGGT
CCACAACCAGGTGGTCACCAGCGAAGGTAGTCGCATCGTCCAGTCGCACA
TCGACCACCACCATTCCCGCGTCATTTTGATCCCGTCCCACGAACCTTTC
ACGCGCCGCAATGTCCATCACTTTGCCCAGCATGGGGCGCGCTTGGGGAC
AAACACCCACCGGAACGAAACCGGGAATGCGCGGGCCATTCATGTGGACG
ACATGGAAGAGTTTGTAGAGGACCGGCGAGAGTACGTCCGGCACCCCAAC
GACGTGCTCCTCCGAGACGAAGACTTGCATGCCATGGAAGCCACAGCGCA
TTTCCCCTACCCTTTCATCACGAACGGAGACGTGCACAAAATCGAGGTCG
CCCACGGCGTGGATGACCACCACGACGCCGACTCCCACGACTACTTCGGC
TCCTCCATGGTCAACATGGGCTACAACCCCGCCACGAAACTGACCACCCT
GGCGGTGGGCGCCCCGGGGGCCCTGGACACGAGCGGGGCCATTTATTTCA
TGGACGTGAACCGGGAGGGCGACGTGGAGAACTACTCCTACCTGACGCAC
GAGGACTTTGTGGAgacggtggggggagggacggggggctCGGTGTCCTT
TGGGAAAGCGTGGGGCCCCAATTCGGCGCTGGGCTGGGCGCTGGAAAACG
TGGGGGACTTGGACGGGGACGGGGTCAACGACTTGGCGGTGGGCGCGTTA
GGATACCCGGCGGGGAACTCGAAGGGGGCCGTTTTCATCTTCTTTCTGAC
CGCCGAGCACGAGATCAAGAGCTACAAGGTGATCACCGAGGGTGTCGGGG
GCTTCCCTCACCAATTGAACCAGCACTGGCGCTTcgggtcctccctctcg
cgccTGGGAGACCTGGACGGCGACGGGGTGACGGAGCTGGCAGTAGGGGC
GATGGGCATGGGAAAAGAGCGGGGCGgggtcttcgtcctctttaTGAACA
AGGACGGGACGGTCAAAAACACGCATCTGATCGCGTCCTTGCGCGGTTGG
GACCACAAGCTGGTCGTGCAGGATCAATTTGGCTCCGCCGTCCGGGGGAT
GGGCGACCTCGACGGGGACGGAGTGCCCGACATGGTCGTCTCGGGCGATG
GCTTCCCCGCGGGCGAAAGCTACGGGGCAGTCTGGGTCCTCTTTTTGAAC
GTGGACGGCTCGGTCAAGTACTGGCGGCGCCTGGACGAATTCGACCCGCT
GCTGGAGCCTGAAGCCCTGTTTGGAGCTTCCTTGGCATCCTTGGGGGATC
TGGATGGGGACGGACGGCAGGAGCTCCTGATCGGCGCCCCAGGCCTGCAT
GAATTGAGGGGAGAAGCCTTCATTGTCTccctggacaaggaaggcCGCGT
GCGGCATTACAAGACCGTCACCGATTCCGACTCggacctggaggcggtgA
TTTCTTCCAACGATGAATTTGGATGGTCGGTGACAAGTCTGGGCGACCTG
GACGGGGACGGAGTGCCGGACCTCGCCGTAGCGGCAGAAACCTCGCCGGG
GGAGACCAATCATCCCTCGCTCTACATGCTTTTCTTGGCAAAGCAGGACG
AAGGGCCTGGGGCAGCGGGTGCCGCCCGggcaatggaggagaagggagcg
gCGGCACAGGAAACCAAACGTCGTTTGCGATGAATGGATTATCTCTCAGG
TTCACGTAAAGCAAGCGGTACAACTGGAGATGCGAACGACATCAATTCAT
CGGGACTGGTGTTTCGAGGGCGCACGCCGCGGACGCCGTCAAATCCGAAT
GGTTTTGACGCACAGGTTGATATTGAGACCCAACAACCGGGCATTGGAAT
GAGCAATAGTAGTAGCCACGGAGTGAGCCGCAACAGTGCAGGATCGGGTG
CAAGCGCAGGTTTGCCGTACATGCAGCAGCATTCGATGCAGCACGGCTCA
AGTTCCACCGCTGCTTCACAGTGGCAAACCAATACCCAAAATGAGCGTAC
AGTAGTCGCCCCGCCCCGTCGCGGTActtccctgtcctcttccgTTTCGA
CGTACGAAGACGACAAGAACAAGAAATTCcgatcctccttctcctcccct
gcctctgcctccctaTCCCAGGGCCAGAGCGCCTTTCGAAGCCTTTTCAT
CGGCGCCTGTCTCACCTGTGGTTTGCTGGGTATCCTCTCCACCGTAGGGT
TCTTCAACCGAGGCAAGACGAACTCGTATGTCTACACCCGACCTCGATCC
TCCTCTTACGCTTCACCTGCCGTCCTTGATCCGGAGGATTTCgacgtccc
cctcccgcccaaaCGCGCCTTGCGGGGCTCGGTCCACAACCAGGTGGTCA
CCAGCGAAGGTAGTCGCATCGTCCAGTCGCACATCGACCACCACCATTCC
CGCGTCATTTTGATCCCGTCCCACGAACCTTTCACGCGCCGCAATGTCCA
TCACTTTGCCCAGCATGGGGCGCGCTTGGGGACAAACACCCACCGGAACG
AAACCGGGAATGCGCGGGCCATTCATGTGGACGACATGGAAGAGTTTGTA
GAGGACCGGCGAGAGTACGTCCGGCACCCCAACGACGTGCTCCTCCGAGA
CGAAGACTTGCATGCCATGGAAGCCACAGCGCATTTCCCCTACCCTTTCA
TCACGAACGGAGACGTGCACAAAATCGAGGTCGCCCACGGCGTGGATGAC
CACCACGACGCCGACTCCCACGACTACTTCGGCTCCTCCATGGTCAACAT
GGGCTACAACCCCGCCACGAAACTGACCACCCTGGCGGTGGGCGCCCCGG
GGGCCCTGGACACGAGCGGGGCCATTTATTTCATGGACGTGAACCGGGAG
GGCGACGTGGAGAACTACTCCTACCTGACGCACGAGGACTTTGTGGAgac
ggtggggggagggacggggggctCGGTGTCCTTTGGGAAAGCGTGGGGCC
CCAATTCGGCGCTGGGCTGGGCGCTGGAAAACGTGGGGGACTTGGACGGG
GACGGGGTCAACGACTTGGCGGTGGGCGCGTTAGGATACCCGGCGGGGAA
CTCGAAGGGGGCCGTTTTCATCTTCTTTCTGACCGCCGAGCACGAGATCA
AGAGCTACAAGGTGATCACCGAGGGTGTCGGGGGCTTCCCTCACCAATTG
AACCAGCACTGGCGCTTcgggtcctccctctcgcgccTGGGAGACCTGGA
CGGCGACGGGGTGACGGAGCTGGCAGTAGGGGCGATGGGCATGGGAAAAG
AGCGGGGCGgggtcttcgtcctctttaTGAACAAGGACGGGACGGTCAAA
AACACGCATCTGATCGCGTCCTTGCGCGGTTGGGACCACAAGCTGGTCGT
GCAGGATCAATTTGGCTCCGCCGTCCGGGGGATGGGCGACCTCGACGGGG
ACGGAGTGCCCGACATGGTCGTCTCGGGCGATGGCTTCCCCGCGGGCGAA
AGCTACGGGGCAGTCTGGGTCCTCTTTTTGAACGTGGACGGCTCGGTCAA
GTACTGGCGGCGCCTGGACGAATTCGACCCGCTGCTGGAGCCTGAAGCCC
TGTTTGGAGCTTCCTTGGCATCCTTGGGGGATCTGGATGGGGACGGACGG
CAGGAGCTCCTGATCGGCGCCCCAGGCCTGCATGAATTGAGGGGAGAAGC
CTTCATTGTCTccctggacaaggaaggcCGCGTGCGGCATTACAAGACCG
TCACCGATTCCGACTCggacctggaggcggtgATTTCTTCCAACGATGAA
TTTGGATGGTCGGTGACAAGTCTGGGCGACCTGGACGGGGACGGAGTGCC
GGACCTCGCCGTAGCGGCAGAAACCTCGCCGGGGGAGACCAATCATCCCT
CGCTCTACATGCTTTTCTTGGCAAAGCAGGACGAAGGGCCTGGGGCAGCG
GGTGCCGCCCGggcaatggaggagaagggagcggCGGCACAGGAAACCAA
ACGTCGTTTGCGATGA back to top
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