rna7232, rna7232 (mRNA) Nannochloropsis gaditana

Overview
Namerna7232
Unique Namerna7232
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length539
Alignment locationCM002471.1:71426..71826 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103746g1.5522.mrna
Orig protein idgnl|cribi|Naga_103746g1.5522
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:71426..71826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_103746g1gene6996Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23458.1cds7215Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7232rna7232-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7232 ID=rna7232|Name=rna7232|organism=Nannochloropsis gaditana|type=mRNA|length=539bp
AGAACATGGAGAGGTTGCGGCGGGACGCCATGACTTCCCAAAAGCATCGG
GGATTTACCCAGCGCTCGGAACGTCAGCGCGTGACCAATCCCACTGCGCC
CAAGGGTCCGACTTCTGCCACGGAGGCCCGTCTGGCCCAAGATGAAGCCT
CGGCCGCAGCAGGTCGCAAGACTCTGCTCGAATTGCACCAGGAGAAACTA
CAGGCAGCGCAGAAGAAGGAGAAGGAGAAGCAAAGGGTGGAGGGAATAAA
AAGGACACCTTGGTCCCGAGAAGCTTTCATGGAGGGGACGAAAGAAATGG
GGGCCCGACAGGCGAGTGATTTGTTCACGCAAGCCAAGGAACTGACGGGA
AGATTTTCGCGACAGTATCGTTGAGGTTGAAGCGTGGAAAATGAGGAATA
ATGTGTGGCAAAGACAAAGCACCCTAAAATAGGACCTGTCAGGAAACACG
TCTGTCGCTCAGCTCGCACCTTTAGTGTCGTAGGTTTTTCTCGCCTAGTC
CGTTTTCTCGCCTAGTCCGTTAAAGCACGAACCAATTTC
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protein sequence of rna7232

>rna7232-protein ID=rna7232-protein|Name=rna7232|organism=Nannochloropsis gaditana|type=polypeptide|length=102bp
MAGKRCPTRCEQAGREGGREGETGVGSERRAMSKPPQGKEETEEKEENER
RHCPRKAACHACPILPPPPPLLHPTDPLPSFPTSLLPHSAYRHVREKRAA
AA
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mRNA from alignment at CM002471.1:71426..71826-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7232 ID=rna7232|Name=rna7232|organism=Nannochloropsis gaditana|type=mRNA|length=401bp|location=Sequence derived from alignment at CM002471.1:71426..71826- (Nannochloropsis gaditana)
ACAGGCGCAAGCGTTGATGAAGCACGCGCCGGAGGGAGAGGCGGAGGCGG
CGGAGGAGAGCGAGGATGAGGGTCTGATTGGCCCTTCCATGGACGATGGC
CGGGAAGCGGTGCCCGACGAGATGTGAGCAAGCAGGGAGGGAGGGAGGGA
GGGAGGGAGAGACTGGGGTAGGTAGTGAGCGACGTGCAATGAGTAAGCCA
CCGCAAGGGAAAGAGGAGACGGAGGAGAAGGAGGAGAACGAGCGTCGGCA
TTGTCCTCGGAAGGCTGCTTGTCACGCATGCCCCATCCTTCCACCACCCC
CTCCCCTCCTCCACCCCACCGACCCCCTTCCCTCCTTCCCTACTTCCCTC
CTTCCCCACAGCGCCTACCGTCACGTCCGAGAGAAGCGGGCTGCGGCCGC
T
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Coding sequence (CDS) from alignment at CM002471.1:71426..71826-

>rna7232 ID=rna7232|Name=rna7232|organism=Nannochloropsis gaditana|type=CDS|length=306bp|location=Sequence derived from alignment at CM002471.1:71426..71826- (Nannochloropsis gaditana)
ATGGCCGGGAAGCGGTGCCCGACGAGATGTGAGCAAGCAGGGAGGGAGGG
AGGGAGGGAGGGAGAGACTGGGGTAGGTAGTGAGCGACGTGCAATGAGTA
AGCCACCGCAAGGGAAAGAGGAGACGGAGGAGAAGGAGGAGAACGAGCGT
CGGCATTGTCCTCGGAAGGCTGCTTGTCACGCATGCCCCATCCTTCCACC
ACCCCCTCCCCTCCTCCACCCCACCGACCCCCTTCCCTCCTTCCCTACTT
CCCTCCTTCCCCACAGCGCCTACCGTCACGTCCGAGAGAAGCGGGCTGCG
GCCGCT
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Synonyms
Publications