rna7225, rna7225 (mRNA) Nannochloropsis gaditana

Overview
Namerna7225
Unique Namerna7225
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1777
Alignment locationCM002471.1:56914..58356 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101209g2.6888.mrna
Orig protein idgnl|cribi|Naga_101209g2.6888
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:56914..58356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101209g2gene6988Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23466.1cds7208Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7225rna7225-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7225 ID=rna7225|Name=rna7225|organism=Nannochloropsis gaditana|type=mRNA|length=1777bp
TCAGCGACAAGGACAGGACTGGACCGCTTCCTCTCGCGCCGTCTTCTACC
GCGTCCTCCACCTCTTCCGCGGGCACCCTGACCTCCTCCAGGGGTTCTCC
TACTTTCTCCCCGCCTGCTTGCAGGCAGAAGCCCAGGAGCACGTGGTCGC
TGCCGGTGTGCCTCGGCCGGTCGAGAGCCGACGAGGCGATTTCCCGCGGG
AACGATTGGCGATGGACGCGTGAGGGAGGAAAAGAAGGAGGAGGGTGGGG
GGAAGAACGGGGATAGGAAGGAAAAGGATTTGGGGGGGGGCATACATTCT
GTGACCTGAAGGCATATTGAGTACGCTGGCTTATGATGTGAGTATATAGT
ATCGTGGTGGAGGAAGGATGTGGACGGACGTGTCCGGATCCCACGTCGGT
TGAGGGGTAAGGTACGTGGGGAGGCTCGCACCCTACCCGGAGTTGCCTTT
GCCTACGGTCTCTTGTCTGCCTTTGGTGGTTGGAAACCGGGAGATTCCCC
GAGGACGGGGGGTCAGGGACCGAAAAAGAGCGACGGAGGGAGGCACAAGT
CCGGCTCCAAGAGCCATGGGCATGGGGGTGGTGAGATGCGGATCCCGGTG
GCAGGAGGGGCGGAAAGGAGAGGGCTTGAGGTTCATTTGGAATCCGTCGC
CGACTGAGGGCGGTGCCCACAGGCGGAGAGAGAAGCGTGTGTGGAGTCGA
ACGGGCCCCAGGCAATGACGGCCGGGACAGTATGAATTCATGTGTGGGAA
AGGGAAAAGAGATAGAGAGCGAGAGAGAGAAACAGCGAGCAGGAAAGGGC
GAGAAAGGCCGAGAGAGGACGGAGACAAGGGGAGGCGTGCGGCTGGAAAG
TTTTGCATAGCAGGAAACAGTGGGGCGAGAAAAGAGGAAAGGGAAGAGTA
GCGGTTTTGGAGTAACGGTTTTGGGTGGGCATCAAGGGGAATGAAAAGGC
GGAGAGCGGCTGGAGGGAGCGCAGCATAAGCCGTATACAGTTGTGCATGG
AGAAGGAAAAGATTTCTGAGCGGGGTGAGAGAAGGAGCGCGTCATGTCCA
CACCGGAGGGGATGGCAATTGGCAGGGAAGCAAAGGACAAGCGAGGGCGT
CGGCAGACGACAAGGAGGTCACGAGCCGATCATTCAAGGAGGCAGCTTTA
ACCGCTTGCTGGCGTCCGGAATTTTCCCTCCTCGTCCATGCTTGGGGCCA
CACGCCTCCACGCAGAGGCCGTCGATCCCTCTGGTGATGGGGCAGGCGTG
CCAGTTCCTTTCTCTTGGCGACCTGCGTGGATGGCGGTCCGTCCATACAG
CGCGAGGCCAAAGCTTTTTCTCCTCAGCCGAGGGAAGGAATGCTTGGTAG
GGAGGAGGAGGATGGAGAGCAGGGAATGGAGGGCGAGGAAGGGGAGTCCG
GTCGCAGGAGGCGCTTCCCCCCCTGTGGCCGAGGACGTGAGAGGGAGGAA
GGAAAGGGGCGCGAGGGAGGAGAAGCCCGGGCTGCAGCGCCCCTCTTGTG
TCGGCTTCAAGGGGGGGAGGACGATGTGGAAAGGGAAAGAAGGGGAAAGA
GGGGAAAAGGGAGGAAAGGGAGGAGGGAGGGCGGGAGGGCGGGAGGGGAA
GAAATCTTTCCCTCTCCGACTCCCGGGACTCCCATAGTTACAAGGAAGAA
AAAATGTGCCACACTACAGCCAGCAGGCTGCACGGAAGGAACGCGGGCAT
GTAACGAGAGAGAAGACACCGAGGCATCGTGCCCTACCCAAAAGATATTT
TAAAACCGGATATTTACGGCCCTGATC
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protein sequence of rna7225

>rna7225-protein ID=rna7225-protein|Name=rna7225|organism=Nannochloropsis gaditana|type=polypeptide|length=133bp
MAERYLEGRARERMRQMSGERKDIQGERMKQKCMTGQGRARVELKASHHG
DWDRCRRGGRPGPPHPRPPPLPPPRPPPPPPPLTSFSDKGSRGWERDGCM
GMIRRQKVTLMGVSTILVAADYRHDKDDKCRRA
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mRNA from alignment at CM002471.1:56914..58356-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7225 ID=rna7225|Name=rna7225|organism=Nannochloropsis gaditana|type=mRNA|length=1443bp|location=Sequence derived from alignment at CM002471.1:56914..58356- (Nannochloropsis gaditana)
TTCTCCTTTGGACAGGCGGGGTACTCCTTGATTTTCATTCCAGTGTCCCT
CTCGCAGTGGGCGTGGAACACGTGCTCCCATGGTAAGAGGCCAGGGAGGG
AGGGAGGGAGGCGAGGAGGGAGGAAGGGAGGGGGAGAGGGGAAGGACTCA
GGGGAAGTAAGTGACTAGCTCAAGAGAGGGAAAAGGAGGCTTGCGAGGTC
CGATTCTTCGTGATCTCAGATGATCTCGCTGAGTGATTCATGCCTTCTCC
TTTTTCCCTCCCTTCCTCCCTATATTCTGGCCTCAGTCCTCGCATTCGCG
CACCACCGCTACACTAGCAAAGGACATGACGACATCCTCCTTCCCGCCGG
AGTCGTCACCGAGGTCTATCAAGCCACGCCCTCCGCCCCGACCTCCCTCC
CTCCCTCCGCCCGTGCCTCCGTCCCTCCCTCCTTCCCTTCCTCGATGGAA
GGGGAGGAAGAAACCAAGATGGAGGGAGACTACGCAACGCTGAAGGTTTG
AGGGGAAATAAAGGAGGAGGGAAGGAAGGGAGGAGGGAGAAAGGGGGATG
TATGTGCCATGGGGTTGGGGCTTCCACATAGCGAAGGGTAGGGAAGAAAC
GAGAAGAGGAAAGGAGGTGGGGGGGGGGGCTCTGTGCTTGATTGAACAGC
GTGTTATATGTGATGGACTGAGTCAGGCGCTGTTGAAGGGGTCGGGGGGG
GCGGTGTGCTGATGATGGGGAAAGGGGGGGTTAGTGAATGGCCGAAAGGT
ACTTGGAGGGAAGGGCGAGAGAGAGGATGAGGCAGATGAGCGGGGAAAGG
AAGGACATCCAGGGGGAGAGAATGAAACAAAAATGTATGACGGGGCAAGG
GAGAGCGAGGGTGGAATTGAAAGCGAGTCACCACGGGGATTGGGACAGAT
GCAGGAGAGGCGGGAGACCCGGCCCCCCTCACCCCCGTCCTCCCCCCCTT
CCTCCCCCCCGTCCTCCTCCGCCACCTCCGCCTCTCACGTCTTTCTCGGA
CAAAGGATCTCGGGGCTGGGAGCGGGATGGGTGCATGGGCATGATACGCC
GTCAGAAAGTGACGTTGATGGGGGTGAGCACCATCCTAGTCGCTGCCGAT
TATCGTCATGATAAGGATGATAAGTGTAGGAGGGCATAAAAGGGGAGGCC
GTGCAGTTTAGGTGCGAAGGAAGGAGAGGGGACTAGCCTTCGACGCCGTT
TGTAGTAGGGAAACGGGGAAAGGGGAAAGACATTGCATAAACAACATGTG
CAGTTGCCCTTTGATCAGGGCCGTAAATATCCGGTTTTAAAATATCTTTT
GGGTAGGGCACGATGCCTCGGTGTCTTCTCTCTCGTTACATGCCCGCGTT
CCTTCCGTGCAGCCTGCTGGCTGTAGTGTGGCACATTTTTTCTTCCTTGT
AACTATGGGAGTCCCGGGAGTCGGAGAGGGAAAGATTTCTTCC
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Coding sequence (CDS) from alignment at CM002471.1:56914..58356-

>rna7225 ID=rna7225|Name=rna7225|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at CM002471.1:56914..58356- (Nannochloropsis gaditana)
ATGGCCGAAAGGTACTTGGAGGGAAGGGCGAGAGAGAGGATGAGGCAGAT
GAGCGGGGAAAGGAAGGACATCCAGGGGGAGAGAATGAAACAAAAATGTA
TGACGGGGCAAGGGAGAGCGAGGGTGGAATTGAAAGCGAGTCACCACGGG
GATTGGGACAGATGCAGGAGAGGCGGGAGACCCGGCCCCCCTCACCCCCG
TCCTCCCCCCCTTCCTCCCCCCCGTCCTCCTCCGCCACCTCCGCCTCTCA
CGTCTTTCTCGGACAAAGGATCTCGGGGCTGGGAGCGGGATGGGTGCATG
GGCATGATACGCCGTCAGAAAGTGACGTTGATGGGGGTGAGCACCATCCT
AGTCGCTGCCGATTATCGTCATGATAAGGATGATAAGTGTAGGAGGGCAT
AA
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Synonyms
Publications