rna7192, rna7192 (mRNA) Nannochloropsis gaditana

Overview
Namerna7192
Unique Namerna7192
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1050
Alignment locationCM002470.1:676185..676566 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100414g3.7735.mrna
Orig protein idgnl|cribi|Naga_100414g3.7735
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:676185..676566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100414g3gene6955Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7192rna7192-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23500.1cds7175Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7192 ID=rna7192|Name=rna7192|organism=Nannochloropsis gaditana|type=mRNA|length=1050bp
ATGCTGAGGGAGGGTTCAGGAGCGAACTCTCCTAAGGGGTATTCTTTGGT
CGAAGACAGGCCTCGTTGCTACTTCACACTGGGAAAAGACTACTGCCCTG
CGGCCACGAACAATAAGTGGACAGATTATTACATGTCCTACATCGAGCGC
ACGTCTCAAGTGCTGACTAATGCTGCTCGCATGGATCCCCAGGATTTCAA
GCGCATCTATAATGGTAATGACGGAGGCACCTACAAGTGCTCGACTCGGA
CCCTTCCTCCCCTTCGATACAGTGCTAATGCGCAGCAGGCTGCTTTAAAA
GAAAGTCAAATGCTGGCTGATCCAAACTGTCCTTTTCAGCACGATACTTG
CAACAAGTACTGCAGGCTATACGGTGGCAAATGCAATTGGGATGCTCGCA
TATCCAAGTACGAGTCGAATTGGCGGGGCATGGGCGAGAACATTGCCATG
ACACAACGTAATTTGAAGGAGGAACCGAGCGCCCCAGTACTCCAGTGGCT
CGCCTCGGGTCCACATTGCTCGAACATCTTCAGTGGGGACTTCTCCCATT
TAGGTACTGGTGCCTACGACCGATACTGGACGCAGGATTTCTTGAAATTG
TCCGGCTCGACGAACAACCCTCTCCACGACGGGACGCACTACTTGCACCC
CGCCAAGACCGGTGGCAAACTCCGGTTCATGGCCTCGTTCAAAAGCTCCT
CCGCCCCCAACAAGATGGAGGTGGTGGTGAACGGTCAAGCCAAGTCTATG
TCCCTCCACCTAGGGAGCAGCGCTCAAGGCCTCTATGCTTACGAGCAGAG
CCAGCCGGGCTCCAGCGCCGGGTGCATCAGCTACTACTTCGTCGTCACCA
CCTCGAGCGGGTCCACCTATAACATGCCCGAGACAGGCGCCTTCCAGACC
GCCACCAGGGACCATGGGAGCGGGAAAGAGAAGGGTTGCAGCTCCCGATG
GACACCGCCGACACGACACGCCACACGACGAGAGATGGCCACGGATCATA
AGGGTGGAGCCCCTATGACTGAGGACGCGGATCTTGCGTTGGCGAAGTAG
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protein sequence of rna7192

>rna7192-protein ID=rna7192-protein|Name=rna7192|organism=Nannochloropsis gaditana|type=polypeptide|length=70bp
MEPRDRLLQTREPIVGALKYVFLFLNYVPRDGSVRENFSEEAACNHTRFE
SKKALSSILSLCPACCFYLV
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mRNA from alignment at CM002470.1:676185..676566-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7192 ID=rna7192|Name=rna7192|organism=Nannochloropsis gaditana|type=mRNA|length=382bp|location=Sequence derived from alignment at CM002470.1:676185..676566- (Nannochloropsis gaditana)
ATGGAGCCACGCGATAGGCTTTTGCAGACAAGGGAACCTATCGTGGGTGC
TCTCAAATACGTCTTCCTCTTTCTCAACTATGTCCCGCGCGACGGCTCTG
TGCGCGAAAACTTCTCGGAAGAAGCAGCCTGTAACCATACGCGTTTTGAA
AGCAAAAAAGGTTGAATAAGCGAGAACAGCTAAGCGGGCAGCAATTGTTT
TCTTAGGATTCTCCTCTTTTCTAGATTTCGTCGGCCTTGCCGATCAATCC
CTCCCTGCGAAAATGCCATGTCTGCTCATATTTATTATTCCAATTCCAAA
TTTTTGCTTTTCAATTTGCTGTATTCTAGCCTTGTCTTCCATTTTAAGTT
TATGTCCTGCTTGCTGTTTTTATTTGGTATGA
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Coding sequence (CDS) from alignment at CM002470.1:676185..676566-

>rna7192 ID=rna7192|Name=rna7192|organism=Nannochloropsis gaditana|type=CDS|length=426bp|location=Sequence derived from alignment at CM002470.1:676185..676566- (Nannochloropsis gaditana)
CCTTGTCTTCCATTTTAAGTTTATGTCCTGCTTGCTGTTTTTATTTGGTA
TGAATGGAGCCACGCGATAGGCTTTTGCAGACAAGGGAACCTATCGTGGG
TGCTCTCAAATACGTCTTCCTCTTTCTCAACTATGTCCCGCGCGACGGCT
CTGTGCGCGAAAACTTCTCGGAAGAAGCAGCCTGTAACCATACGCGTTTT
GAAAGCAAAAAAGCCTTGTCTTCCATTTTAAGTTTATGTCCTGCTTGCTG
TTTTTATTTGGTATGAATGGAGCCACGCGATAGGCTTTTGCAGACAAGGG
AACCTATCGTGGGTGCTCTCAAATACGTCTTCCTCTTTCTCAACTATGTC
CCGCGCGACGGCTCTGTGCGCGAAAACTTCTCGGAAGAAGCAGCCTGTAA
CCATACGCGTTTTGAAAGCAAAAAAG
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Synonyms
Publications