rna7185, rna7185 (mRNA) Nannochloropsis gaditana

Overview
Namerna7185
Unique Namerna7185
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1507
Alignment locationCM002470.1:655153..656178 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100581g4.1270.mrna
Orig protein idgnl|cribi|Naga_100581g4.1270
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:655153..656178 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100581g4gene6947Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7185rna7185-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23506.1cds7168Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7185 ID=rna7185|Name=rna7185|organism=Nannochloropsis gaditana|type=mRNA|length=1507bp
ACTCGTTGACAGTGTCGTGATTGTCTTCATTCAACGACTTTCCCTGTGTT
CTACTTCGTCGTCACTTCAATCTCCTTTCCTCCTGCATCACTTCACTTGT
TCCCGGAGATATAAAAGTGCACAAAGTTGAGCTCCCAATGGCAGCACTGT
ACTCATGACTTGTAACACTAGATCATGTTTAGCTTCATGTCTCTGCCCTT
TGATCATACATCACACTTATCGCAAACATAGAACAGCACCTTCCAAAGAT
ATGCGATTTCACGCCACCACCTGCACCTTCTATCTGCTCCTTGGCGCTTT
AGCCTTGGTCCATGGCGACACTATGAACACTCCCAACCTTCGCAGGGCGC
AAGAAGCGTCGGCTGAGACCACAGTCGAGAAGGTACAAGAACCTGCGGCG
GAGGCAAGCATGCCTGCGGTGGCGGCTCCGGATGCCAACACACCGAACCT
CCGCATGGATATGCCCATGCCTGGGGCGATGGACGGCATGAACATGGAGG
AGGGCCCCCCCACAGAGGGAGATGATAACCATCGAAAGCTCTGGTGGTGG
AACAAGTACAACAACTGGGGCTGGAACGACCCGTGGGCCTGGAAGTATGG
CCAGAAGTACGGCGGCTGGAACAATGGCTGGAACAACGGCTGGGGCAACC
AGTGGAACAACGGCTGGAACAACGGCTGGAACAATGGCTGGGGCAACAAC
AACTGGAACAACGGCTGGAACAACGGCTGGAACAACGGCTGGAACAACAA
CTGGAACAACGGCTGGAACAACGGCGGATGGAACCAGTGGAACAACGTCA
ACCGTTGGAACTGGGTCTAAGCGTGCGTGCATCTGAAGATACCGCCGACT
GTTCAGGCACCTAACTGTACAAAAAGGATGATTCACGCCTATGGTTCCGC
CCTGGAGGTGGAGGAATAATCGAATGGAGGAAAACGTGTCGAGAGAGACC
TTTGATCGGGTTTATGTGAGAAGTCTTGCACCCTTTATCGGTGTTGTTAG
TTTATGACTGCCCGCGATGGGGAGAGAGAGAGGATTTGACTACATATACG
TGTATTGTGACTCCCGCAAACCAGAACATGATTTATGGCGAAGCACCGGG
GCCTATAGAGGAAGCGGATGAGGAGAGAAGAGAAGGCAGCGGGAAAAGCT
AGAAACGGGGATGGTGGAATGGAGATCCCATAACTGAAAGGCTTTGGTTC
AGCAAAAGTTGGTTTTTAAAAGAGAAAAGTAAGGACCGTTGAGTAACACG
AAGTAGGCCAAAGGGATGAGTGGACGGGGACGCAAAAATATCGGCGGTGA
GCGAAGAAAGGAGACGGACTCTATTCAAGTGAATGGGAAACGACGCAGTG
TTTGAGTACTTAACTTCGAAAGAAAAGTCATGACGAGCCGAATCCTTTCC
ATCCTTTTCGTTTTATGCGTTATATGTTCAGTACCTCTCTACAAGTTGTT
CGGCCGTGCTACTTTGCCTTATGACAATCCAGAACACAGGCTGCAAATAC
CGATTCA
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protein sequence of rna7185

>rna7185-protein ID=rna7185-protein|Name=rna7185|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
MVDPNQKVSYGFQFLSQVEERGPGRGGVGDGVAGGERASGPQQQVLAPSI
PRRTAADILAARADPRRNRPDTDKLFDVVTLLQQIPGHRPVSADEILKEL
GVDLRPPDVVDRAVHNLL
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mRNA from alignment at CM002470.1:655153..656178+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7185 ID=rna7185|Name=rna7185|organism=Nannochloropsis gaditana|type=mRNA|length=1026bp|location=Sequence derived from alignment at CM002470.1:655153..656178+ (Nannochloropsis gaditana)
CATATCACGTTGCAACGTAAATAATGTGAATCTCGCATCCGATGGAAAGC
TCCTTTATATCATTGACACCGTTCTCTTTCCAAAGTTCCCCTTGTAGCCC
TGACATCTTTCCTGTTCgacttctttcctctccattttcttttccaagCC
CCGTCCCCACGTAGGCCTCATGGTCGATCCGAATCAAAAAGTTTCGTATG
GCTTTCAATTTCTATCGCAAGttgaggaaagagggccaggcaggggaggt
gtGGGAGATGGAGTtgcaggaggggagagagccTCAGggccgcagcagca
ggtcCTGGCTCCCTCAATACCTCGCAGGACAGCAGCTGATATCTTAGCGG
CAAGGTACACGagcagaaagggaagaaaacaGATAATCGGATggaatgga
ggaaagaggcagggatgCGGTACAAAAGTCGCGAAGCGATGCTTCGGACC
TGACTTTCTCGGAGGGTTCTAGGGTCTACTTCGAAaccacctcttccatc
ctcctggcCGCTCATGTGCACGAGCTTTTTCTTTGATCGCACCTCACATG
CTACACTTTTGCCATCCTCCGCAGGGCTGACCCTCGCCGGAACCGCCCCG
ACACGGACAAGCTCTTCGACGTGGtgaccctcctccagcagatCCCGGGG
CATAGACCGGTGCGATAGACCGAGAtggcaggggggggcgagatggcagg
gggggagagaacaTCGATGGTATTTCCATCCCAGCATATGTCCTGTATGG
GCGTAGTGCCATGATTCGGCATGCTCCCATGTTCCTGGTGCCTCACGTGT
GCATCTGATTTATGTATATAACAGATATGCATCGactcccatccccctcg
tGCCAAGGCGGATCCCCATCATTTCCCggaaccctaaccctaaccctccc
tttttcctttgcctctctccaccgcctttttcctccataGGTGTCCGCGG
ACGAGATCCTGAAGGAGCTGGGGGTGGACCTCCGGCCCCCCGATGTTGTA
GACCGAGCCGTGCACAATCTCCTTGA
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Coding sequence (CDS) from alignment at CM002470.1:655153..656178+

>rna7185 ID=rna7185|Name=rna7185|organism=Nannochloropsis gaditana|type=CDS|length=1068bp|location=Sequence derived from alignment at CM002470.1:655153..656178+ (Nannochloropsis gaditana)
ATGGTCGATCCGAATCAAAAAGTTTCGTATGGCTTTCAATTTCTATCGCA
AGttgaggaaagagggccaggcaggggaggtgtGGGAGATGGAGTtgcag
gaggggagagagccTCAGggccgcagcagcaggtcCTGGCTCCCTCAATA
CCTCGCAGGACAGCAGCTGATATCTTAGCGGCAAGGGCTGACCCTCGCCG
GAACCGCCCCGACACGGACAAGCTCTTCGACGTGGtgaccctcctccagc
agatCCCGGGGCATAGACCGGTGTCCGCGGACGAGATCCTGAAGGAGCTG
GGGGTGGACCTCCGGCCCCCCGATGTTGTAGACCGAGCCGTGCACAATCT
CCTTGAATGGTCGATCCGAATCAAAAAGTTTCGTATGGCTTTCAATTTCT
ATCGCAAGttgaggaaagagggccaggcaggggaggtgtGGGAGATGGAG
TtgcaggaggggagagagccTCAGggccgcagcagcaggtcCTGGCTCCC
TCAATACCTCGCAGGACAGCAGCTGATATCTTAGCGGCAAGGGCTGACCC
TCGCCGGAACCGCCCCGACACGGACAAGCTCTTCGACGTGGtgaccctcc
tccagcagatCCCGGGGCATAGACCGGTGTCCGCGGACGAGATCCTGAAG
GAGCTGGGGGTGGACCTCCGGCCCCCCGATGTTGTAGACCGAGCCGTGCA
CAATCTCCTTGAATGGTCGATCCGAATCAAAAAGTTTCGTATGGCTTTCA
ATTTCTATCGCAAGttgaggaaagagggccaggcaggggaggtgtGGGAG
ATGGAGTtgcaggaggggagagagccTCAGggccgcagcagcaggtcCTG
GCTCCCTCAATACCTCGCAGGACAGCAGCTGATATCTTAGCGGCAAGGGC
TGACCCTCGCCGGAACCGCCCCGACACGGACAAGCTCTTCGACGTGGtga
ccctcctccagcagatCCCGGGGCATAGACCGGTGTCCGCGGACGAGATC
CTGAAGGAGCTGGGGGTGGACCTCCGGCCCCCCGATGTTGTAGACCGAGC
CGTGCACAATCTCCTTGA
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Synonyms
Publications