rna7182, rna7182 (mRNA) Nannochloropsis gaditana

Overview
Namerna7182
Unique Namerna7182
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length688
Alignment locationCM002470.1:650801..651114 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100581g2.1269.mrna
Orig protein idgnl|cribi|Naga_100581g2.1269
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:650801..651114 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100581g2gene6945Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7182rna7182-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23505.1cds7165Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7182 ID=rna7182|Name=rna7182|organism=Nannochloropsis gaditana|type=mRNA|length=688bp
CCAAGACGAACGTGGACGCCGCAGTGGATGTGATTTGAGGCCCTTTTTAA
AACACTTTCTCCCCGCCAAAGCCTACAGTCATGCGCATTGTCCCTCTAAT
TAAATCCCATGAACAGGTTGGGCAGGGCTGTGGGGGCAGGGGAGGACGAC
GAGGAGCGAGAATATCACACTTGAGCACACACAGCCTTCAAGGACTGAAT
GGCATTTCTTCAGCGTCGATTGCAGTGGAGGGGACTCCTCGTGCTGTCAG
CGGTCATAAATGCCTTGTGCTATGTGCGGCCTCTGTTGCCGCTGCCTGGG
TACCCTTGCCCCTTGGAACTTACGAAGAATCCCCACGGAGGAGGCGACGC
GGGCGGCGCAGCATTTCCATCCCTTGGGGGGGGGTATGGGGGCATGAGCC
AGAAGAGAAGAGGGCGGCATGGACACAAGGCATTAGCAAAGGCAAAAGCC
GGGGTTCAAAGCTCGGAAGGAGTGTTGGTCGAAGAAGCGGAAGATCCGCA
TTCCATTGCGGCGGTCAAGCGTTACGTGCTGCGCTATGTGGACCAGAAAC
GTCGCCCCCACCGGCGCAAGGAAGGCGGGAAGGAGGAGGCGGAGGAGGAG
GAGGGACGGTGTGAGTTGACACGCGTCCTTGGGAAGGAGGGCGAGCTGGG
TATACAGTGGATGCCCGGGGGTAGTACTAATTACAAGT
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protein sequence of rna7182

>rna7182-protein ID=rna7182-protein|Name=rna7182|organism=Nannochloropsis gaditana|type=polypeptide|length=73bp
MDHVILKCQWVQEGPWLFLFFKKIVVSVECVTMRCAISSLCVRGIFSCSL
ALFYRVYRGDVKCGLKITFPCIK
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mRNA from alignment at CM002470.1:650801..651114-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7182 ID=rna7182|Name=rna7182|organism=Nannochloropsis gaditana|type=mRNA|length=314bp|location=Sequence derived from alignment at CM002470.1:650801..651114- (Nannochloropsis gaditana)
ATGGACCATGTGATTCTGAAATGCCAGTGGGTTCAGGAGGGGGTACGTGG
CAGAGACGTGGCGTTAATGAGAAAAGCGTCAAAATTTGTGTAACAGCCAC
ACCGGGAAAAGTTCTCCCATTTCCAATGGCACAGCCCTGGCTGTTTTTAT
TTTTCAAAAAAATCGTTGTCAGCGTGGAATGTGTGACAATGCGTTGTGCA
ATTTCATCTCTGTGTGTGCGTGGCATTTTTAGCTGTTCTCTCGCTTTGTT
CTATCGCGTTTACCGTGGCGACGTAAAATGTGGATTAAAAATCACGTTTC
CATGCATTAAGTGA
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Coding sequence (CDS) from alignment at CM002470.1:650801..651114-

>rna7182 ID=rna7182|Name=rna7182|organism=Nannochloropsis gaditana|type=CDS|length=444bp|location=Sequence derived from alignment at CM002470.1:650801..651114- (Nannochloropsis gaditana)
CCCTGGCTGTTTTTATTTTTCAAAAAAATCGTTGTCAGCGTGGAATGTGT
GACAATGCGTTGTGCAATTTCATCTCTGTGTGTGCGTGGCATTTTTAGCT
GTTCTCTCGCTTTGTTCTATCGCGTTTACCGTGGCGACGTAAAATGTGGA
TTAAAAATCACGTTTCCATGCATTAAGTGAATGGACCATGTGATTCTGAA
ATGCCAGTGGGTTCAGGAGGGGCCCTGGCTGTTTTTATTTTTCAAAAAAA
TCGTTGTCAGCGTGGAATGTGTGACAATGCGTTGTGCAATTTCATCTCTG
TGTGTGCGTGGCATTTTTAGCTGTTCTCTCGCTTTGTTCTATCGCGTTTA
CCGTGGCGACGTAAAATGTGGATTAAAAATCACGTTTCCATGCATTAAGT
GAATGGACCATGTGATTCTGAAATGCCAGTGGGTTCAGGAGGGG
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Synonyms
Publications