rna7181, rna7181 (mRNA) Nannochloropsis gaditana

Overview
Namerna7181
Unique Namerna7181
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length396
Alignment locationCM002470.1:648218..649234 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100581g1.1273.mrna
Orig protein idgnl|cribi|Naga_100581g1.1273
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:648218..649234 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100581g1gene6944Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7181rna7181-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23509.1cds7164Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7181 ID=rna7181|Name=rna7181|organism=Nannochloropsis gaditana|type=mRNA|length=396bp
ATGTCCGGCCCCGCGGGCTTAGACTTGGGTCAGCTGTCGGCCAACTACGT
CTGCCGCGAGACGGTCACGACCATGGAGAAGGCGCTGCTGGCCATATGGA
CCACCTACACCAACGAATTTCGTCAGTCCTACAACAAGCGGATCAAGGAA
GAGGCCCAGAGGGCCCCTCTGCCCTTTCTTTCCTCCCTCTTTAGGCGAAA
AGGGAGGGCCGGTAGAGGGCGGGAAGAGAGGGAGGACGCGGAAAGGGCAC
TGCGCTCCATCCTCCTGGAGGCGCAAGGCTTCTTGGGCATGTGGCTCCTC
TTTCTCACGATCGCATGCCCGGTGGAGATCATGGAAATATGGCCTCCGTC
GGCTCGAGGTAGGGGGAGAGGGAGGGAGGGAGGGCAATGCACCTGA
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protein sequence of rna7181

>rna7181-protein ID=rna7181-protein|Name=rna7181|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
MRIVPLIKSHEQVGQGCGGRGGRRGARISHLSTHSLQGLNGISSASIAVE
GTPRAVSGHKCLVLCAASVAAAWVPLPLGTYEESPRRRRRGRRSISIPWG
GVWGHEPEEKRAAWTQGISKGKSRGSKLGRSVGRRSGRSAFHCGGQALRA
ALCGPETSPPPAQGRREGGGGGGGGTV
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mRNA from alignment at CM002470.1:648218..649234-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7181 ID=rna7181|Name=rna7181|organism=Nannochloropsis gaditana|type=mRNA|length=1017bp|location=Sequence derived from alignment at CM002470.1:648218..649234- (Nannochloropsis gaditana)
CCAAGACGAACGTGGACGCCGCAGTGGATGTGATTTGAGGCCCTTTTTAA
AACACTTTCTCCCCGCCAAAGCCTACAGTCATGCGCATTGTCCCTCTAAT
TAAATCCCATGAACAGGTTGGGCAGGGCTGTGGGGGCAGGGGAGGACGAC
GAGGAGCGAGAATATCACACTTGAGCACACACAGCCTTCAAGGTAAGTTC
AGACACAGTTCAAAGTACTTGAGGCTCGCAGGCTAGACTCCCTCCGATGC
AGAGGCGAGGGTCACACTCCTTCTTCCACACGACCGAGGCATTTTTTGAC
ATATTTTGGGCCATCGATCTTGCGCTTTCAGGACTGAATGGCATTTCTTC
AGCGTCGATTGCAGTGGAGGGGACTCCTCGTGCTGTCAGCGGTCATAAAT
GCCTTGTGCTATGTGCGGCCTCTGTTGCCGCTGCCTGGGTACCCTTGCCC
CTTGGAACTTACGAAGAATCCCCACGGAGGAGGCGACGCGGGCGGCGCAG
CATTTCCATCCCTTGGGGGGGGGTATGGGGGCATGAGCCAGAAGAGAAGA
GGGCGGCATGGACACAAGGTGAGTTATGAGGGTCGAAGGGGAGGAAAGGC
TAAGGAGGGGGGGGAATAAAAACAAAACGTTTAAGCGTGAGCACGCACTA
AGACAAACTACGCAGGGAATGCACAAGATTTAAGCATCTCGGTGGGACTT
TTGATATTGGGTTGACCTTCCCTCGATTCCCACACGTCTCCTTGTTCGAA
TTCTGCAGGCATTAGCAAAGGCAAAAGCCGGGGTTCAAAGCTCGGAAGGA
GTGTTGGTCGAAGAAGCGGAAGATCCGCATTCCATTGCGGCGGTCAAGCG
TTACGTGCTGCGCTATGTGGACCAGAAACGTCGCCCCCACCGGCGCAAGG
AAGGCGGGAAGGAGGAGGCGGAGGAGGAGGAGGGACGGTGTGAGTTGACA
CGCGTCCTTGGGAAGGAGGGCGAGCTGGGTATACAGTGGATGCCCGGGGG
TAGTACTAATTACAAGT
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Coding sequence (CDS) from alignment at CM002470.1:648218..649234-

>rna7181 ID=rna7181|Name=rna7181|organism=Nannochloropsis gaditana|type=CDS|length=1602bp|location=Sequence derived from alignment at CM002470.1:648218..649234- (Nannochloropsis gaditana)
GCATTAGCAAAGGCAAAAGCCGGGGTTCAAAGCTCGGAAGGAGTGTTGGT
CGAAGAAGCGGAAGATCCGCATTCCATTGCGGCGGTCAAGCGTTACGTGC
TGCGCTATGTGGACCAGAAACGTCGCCCCCACCGGCGCAAGGAAGGCGGG
AAGGAGGAGGCGGAGGAGGAGGAGGGACGGTGTGAGACTGAATGGCATTT
CTTCAGCGTCGATTGCAGTGGAGGGGACTCCTCGTGCTGTCAGCGGTCAT
AAATGCCTTGTGCTATGTGCGGCCTCTGTTGCCGCTGCCTGGGTACCCTT
GCCCCTTGGAACTTACGAAGAATCCCCACGGAGGAGGCGACGCGGGCGGC
GCAGCATTTCCATCCCTTGGGGGGGGGTATGGGGGCATGAGCCAGAAGAG
AAGAGGGCGGCATGGACACAAGATGCGCATTGTCCCTCTAATTAAATCCC
ATGAACAGGTTGGGCAGGGCTGTGGGGGCAGGGGAGGACGACGAGGAGCG
AGAATATCACACTTGAGCACACACAGCCTTCAAGGCATTAGCAAAGGCAA
AAGCCGGGGTTCAAAGCTCGGAAGGAGTGTTGGTCGAAGAAGCGGAAGAT
CCGCATTCCATTGCGGCGGTCAAGCGTTACGTGCTGCGCTATGTGGACCA
GAAACGTCGCCCCCACCGGCGCAAGGAAGGCGGGAAGGAGGAGGCGGAGG
AGGAGGAGGGACGGTGTGAGACTGAATGGCATTTCTTCAGCGTCGATTGC
AGTGGAGGGGACTCCTCGTGCTGTCAGCGGTCATAAATGCCTTGTGCTAT
GTGCGGCCTCTGTTGCCGCTGCCTGGGTACCCTTGCCCCTTGGAACTTAC
GAAGAATCCCCACGGAGGAGGCGACGCGGGCGGCGCAGCATTTCCATCCC
TTGGGGGGGGGTATGGGGGCATGAGCCAGAAGAGAAGAGGGCGGCATGGA
CACAAGATGCGCATTGTCCCTCTAATTAAATCCCATGAACAGGTTGGGCA
GGGCTGTGGGGGCAGGGGAGGACGACGAGGAGCGAGAATATCACACTTGA
GCACACACAGCCTTCAAGGCATTAGCAAAGGCAAAAGCCGGGGTTCAAAG
CTCGGAAGGAGTGTTGGTCGAAGAAGCGGAAGATCCGCATTCCATTGCGG
CGGTCAAGCGTTACGTGCTGCGCTATGTGGACCAGAAACGTCGCCCCCAC
CGGCGCAAGGAAGGCGGGAAGGAGGAGGCGGAGGAGGAGGAGGGACGGTG
TGAGACTGAATGGCATTTCTTCAGCGTCGATTGCAGTGGAGGGGACTCCT
CGTGCTGTCAGCGGTCATAAATGCCTTGTGCTATGTGCGGCCTCTGTTGC
CGCTGCCTGGGTACCCTTGCCCCTTGGAACTTACGAAGAATCCCCACGGA
GGAGGCGACGCGGGCGGCGCAGCATTTCCATCCCTTGGGGGGGGGTATGG
GGGCATGAGCCAGAAGAGAAGAGGGCGGCATGGACACAAGATGCGCATTG
TCCCTCTAATTAAATCCCATGAACAGGTTGGGCAGGGCTGTGGGGGCAGG
GGAGGACGACGAGGAGCGAGAATATCACACTTGAGCACACACAGCCTTCA
AG
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Synonyms
Publications