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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100754g2.10356.mrna |
| Orig protein id | gnl|cribi|Naga_100754g2.10356 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:612706..614511 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7171 ID=rna7171|Name=rna7171|organism=Nannochloropsis gaditana|type=mRNA|length=831bp
TGTTGTCCCGGCCTCAGGGCTTTCCATTGAAGCCTCGACCTACCATTCGA
TCCCGTACTGAATCGTCCACACCTCTTTCACAATGACAGGTCGACGTCCC
AATGCTGTTGGCACATTTATGTTGACGTTCCGAAGGTGCCCACTGACTCT
TCTTCGCTTCGCTCACGCCCTGATTACTCCTTCCCCAGTTTCCTCTCAAG
CCGACCCCCGATGTCAAATTTGTCCAACGCCGACACACCCAGTGCCAGCA
GCTCAGCCCGCTCTCCACCCGCAGCCTTCCATGTCCTCGTCTTGACCATG
GCTGCTGTCGCCAACTTTCTGGTTTTTGCCCTTGTCTCTATATTGGGGCC
CTTCTACCCACCCTACGCTACCTCCTCCCCCTCCCTCCATGCCTCCTCCT
TCATGGTCGGCCTCATTTTCGCCGCATATCCCCTCGCACAAATCCTCACG
GCGCCCGTGGCAGGCTCCCTCTCGGCCCGCTACGGTCGACTGCCCACCTG
TGTAGGAGGCCTTTTCCTCCTCACGGGCAGCACCGTCCTTTTCGCCCTCG
GCACGCGCGTCTCCCTCCACGTCCTCGCCCGCTTCCTCCAAGGCTCCGCG
GGGGCCTGCGTGAACGTATCCGCGTTTGCCCTGGTCTTGGAGGTGTCTCA
GGCTCTGCCCCGGGACCTGGGTGTTCAGGAGGTGGTGGTGGGGGCCGGGT
GCATGGTCGGGCCGACCTTGGGCGGTTTTCTTTTCGAATCCCTCGGCTTC
CAAGCCATGTTCCTCGCCTTGTCGTTGCTGCCCTTGAGCATAGGCACGGT
GACCCTGGTGGCGCTGGGGCCTCTGGGGGTG back to topprotein sequence of rna7171 >rna7171-protein ID=rna7171-protein|Name=rna7171|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp
MVSATQSGNKDISLLPKISAGTIREHTCVSSLLSSWWESFREHGPGRLAW
RLVDSPLTFLHAPVPSSRSVQHHASVLHVVSLLFDSNLRPHKLGTSSFPP
LAHPLPLPHVLPLLLLLLLLRFLPVVLSSDLSVAPFHRLLLPLLPPFEVS
PGPCLFLHPRPRPLGYLGRRAPPLPSSFPPSLPLPAFLPESLRPRPSHVL
ALPPFASPAHPLGSGTLPFFPLHLPPLPPRHPLPLRHAPFLPRHGHNILR
LERPRLVRLHPRVVLGSLPFPPSVGAAPLVPSTPGARRFPLLPAAWLDAG
NLPPDQCHAGTHTLRIQYGRQEPGGSLPSLPHGDLRGAVGVAPPPPSLPS
SLPPFLPPSRRWRTLAYGEKRGRRGGRREGGKEGGGGRCIDRGAGGPRSG
RGTGGRGGSDRREDVTWRHSRQGAGGEGRRREGGRGGGRARREKAAAGYS
F back to topmRNA from alignment at CM002470.1:612706..614511+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7171 ID=rna7171|Name=rna7171|organism=Nannochloropsis gaditana|type=mRNA|length=1806bp|location=Sequence derived from alignment at CM002470.1:612706..614511+ (Nannochloropsis gaditana)
AGGGCCCGAGGATAGTACTGTCTTCAAGAGCGTGGCTTGGAGAAGCGTGG
AGGGAGTATACACGCCCCCCAGTGACCTCGACCTTGTCGGAGATACCATA
ACATTATACGTTCGCCATGCCTCAAGGCGAGAACTGTGGTGATTCCGTCA
CAATCCGTACTCCGGCCAGTATTTCAATCATACCAACGACGGAAAGTACT
GTAAGTAAATCCTTTACCTTGGACGCGCAGCTACAGAACCACGAAGGCAG
CGATGAGTGCAATCGTTGCCAGGCGCCCACATCGTGCGAGAGCAAGCACA
ATAGCTGTCCAAACACTGACATCAACGCCACTGGTCATTCAATTAAAATG
GAATCGTACATTGTTGACATGTCCGCACACAATGGTTTACGAGGCGTGTG
TGCCCTGTGGGTGGTTTTGGCCCACTGCGTCGCTAATTATGTAAAGATGA
ATGGTGAGTGCCACGCAGTCCGGAAATAAAGACATCTCACTCCTACCAAA
GATTAGCGCAGGCACAATTCGTGAACATACCTGCGTCTCAAGTTTGCTCT
CTTCCTGGTGGGAAAGTTTCCGCGAGCATGGGCCGGGACGCTTGGCTTGG
AGACTCGTCGATTCTCCTCTCACTTTCTTGCATGCCCCCGTACCCTCATC
ACGCAGCGTCCAGCATCATGCCTCTGTTCTTCATGTTGTCAGCCTTCTCT
TTGACAGCAACCTACGGCCGCACAAACTGGgcacctcctctttcccaccc
ctcgcccaccccctccccctcccccacgtcctccccctcctcctcctcct
cctcctcctccgcttcctccccgtggTCCTCTCTTCCGACCTTTCCGTCG
CTCCTTTCCACcggctgctccttcctctcctccctccttttgaGGTGTCG
CCGGGGCCgtgtctcttcctccatccccgcccccgccctctcggCTACCT
TGGAAGAcgggctcctcccctcccttcctctttccctccctcccttccct
tgccgGCCTTTCTACCAGAATCGCTTCGCCCGCGTCCTTCCCATGTACTG
GCTCTGCCTCCTTTTGCCTCTCCCGCTCACCCTCTTGGGTCTGGAacgct
tccctttttccctctccaccttcctcccctccctcctcgtcaccctcttc
ccctgcgccacgctcctttccttcctagGCATGGACACAACATTCTACGT
CTTGAACGGCCCAGGCTGGTTCGTTTGCACCCTCGTGTGGTTCTGGGtag
ccttccctttcctccttccgtggGCGCAGCGCCTCTCGTCCCTTCAACTC
CGGGAGCGCGTCGTTTTCCATTATTACCTGCAGCTTGGCTTGATGCTGGG
AATCTACCTCCTGATCAATGCCACGCAGGGACGCACACCCTACGCATTCA
ATACGGCCGCCAAGAACCCGGTGGttcgcttccctctcttcctcatgGGG
ATCTACGCGGGGCTGTTGGCGTTGcgccaccccccccctccctcccttcc
tccctccctcccttcctccctccatcccgccggTGGCGTACCCTTGCCTA
TGGGGAGAAGCGaggcagaaggggaggacgaagggagggagggaaggaag
gagggggcggcagGTGCATCGACAGGGGCGCAGGTGGACCCCGTTCTGGT
CGAGGCacaggcggaagaggagggagtgaccggagggaggacgttaCCTG
GAGACATAGCAGACAAGGcgcagggggcgagggaagaaggagggaaggag
ggcgggggggagggagggcacggagggagaaagcggccgCTGGTTATTCC
TTCTga back to topCoding sequence (CDS) from alignment at CM002470.1:612706..614511+ >rna7171 ID=rna7171|Name=rna7171|organism=Nannochloropsis gaditana|type=CDS|length=1356bp|location=Sequence derived from alignment at CM002470.1:612706..614511+ (Nannochloropsis gaditana)
ATGGTGAGTGCCACGCAGTCCGGAAATAAAGACATCTCACTCCTACCAAA
GATTAGCGCAGGCACAATTCGTGAACATACCTGCGTCTCAAGTTTGCTCT
CTTCCTGGTGGGAAAGTTTCCGCGAGCATGGGCCGGGACGCTTGGCTTGG
AGACTCGTCGATTCTCCTCTCACTTTCTTGCATGCCCCCGTACCCTCATC
ACGCAGCGTCCAGCATCATGCCTCTGTTCTTCATGTTGTCAGCCTTCTCT
TTGACAGCAACCTACGGCCGCACAAACTGGgcacctcctctttcccaccc
ctcgcccaccccctccccctcccccacgtcctccccctcctcctcctcct
cctcctcctccgcttcctccccgtggTCCTCTCTTCCGACCTTTCCGTCG
CTCCTTTCCACcggctgctccttcctctcctccctccttttgaGGTGTCG
CCGGGGCCgtgtctcttcctccatccccgcccccgccctctcggCTACCT
TGGAAGAcgggctcctcccctcccttcctctttccctccctcccttccct
tgccgGCCTTTCTACCAGAATCGCTTCGCCCGCGTCCTTCCCATGTACTG
GCTCTGCCTCCTTTTGCCTCTCCCGCTCACCCTCTTGGGTCTGGAacgct
tccctttttccctctccaccttcctcccctccctcctcgtcaccctcttc
ccctgcgccacgctcctttccttcctagGCATGGACACAACATTCTACGT
CTTGAACGGCCCAGGCTGGTTCGTTTGCACCCTCGTGTGGTTCTGGGtag
ccttccctttcctccttccgtggGCGCAGCGCCTCTCGTCCCTTCAACTC
CGGGAGCGCGTCGTTTTCCATTATTACCTGCAGCTTGGCTTGATGCTGGG
AATCTACCTCCTGATCAATGCCACGCAGGGACGCACACCCTACGCATTCA
ATACGGCCGCCAAGAACCCGGTGGttcgcttccctctcttcctcatgGGG
ATCTACGCGGGGCTGTTGGCGTTGcgccaccccccccctccctcccttcc
tccctccctcccttcctccctccatcccgccggTGGCGTACCCTTGCCTA
TGGGGAGAAGCGaggcagaaggggaggacgaagggagggagggaaggaag
gagggggcggcagGTGCATCGACAGGGGCGCAGGTGGACCCCGTTCTGGT
CGAGGCacaggcggaagaggagggagtgaccggagggaggacgttaCCTG
GAGACATAGCAGACAAGGcgcagggggcgagggaagaaggagggaaggag
ggcgggggggagggagggcacggagggagaaagcggccgCTGGTTATTCC
TTCTga back to top
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