rna7159, rna7159 (mRNA) Nannochloropsis gaditana

Overview
Namerna7159
Unique Namerna7159
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length778
Alignment locationCM002470.1:588423..589231 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102523g1.8500.mrna
Orig protein idgnl|cribi|Naga_102523g1.8500
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:588423..589231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102523g1gene6921Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23531.1cds7142Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7159rna7159-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7159 ID=rna7159|Name=rna7159|organism=Nannochloropsis gaditana|type=mRNA|length=778bp
TTCTCTTGTGGTCTCACCCCCTCGACACATCAACCCCCTGCCGTCCCCGC
TGCTATTTCCCTTGCCAGACCTTCGAGGAACTTCCCCCCCAGGCTCGAGC
CTACGTGAAGCGCATCGAAGAGCTCGTGGGGGTGCCCGTCCGGTGGATCG
GTGTTGGTCCCGGGCGTCTGGACGTGATCGACAGAGGGGAGGGATATACG
CTCGAGGTCAAAGGAGTGAACAGAAGACAATTCTAAAGGTGGGAAGGGAA
CGAGCGAGACGGCGACGGGTGAGCGCTGGTGGGAATGCTATTGGAGTGGA
TTCAGGTGACAGGAGGGCAGTATTGTGATGGGACATGAATGGTGTCTTGA
AATCGGGGGGGTGCGTCGTGAGAAAGCGCGTTAGCATTTACATGCGCGCT
GAGGGAAGGAGGAAGATGGGTCCCAAAGGCCGGGGGGAGGGCGAGGAAAC
GGAAAGAGATGAGCAGCAAGGAAAGATGATATACGGTCGACGCATGGGTA
AGGCATGCCAGCCCTCAGTCATTTCGAGGAGGAAAAAAGGGAGGAGGGAA
GGAAGGGAGGAAGGGAACTTTGGGATTTATCCGGTGGCGGGAGAGGTTTG
GTGGATGGGCTTGCCAACAAATCAAAACTCTCGACAACACTTACGGGATT
ACAGTCTCAGTCCTGAGTCTGTATCAAGAGCAATTGCTTGCGTCATCGGC
CTGACTATATACACATAAATATTTATATATATATACCTTTCCTCTTCATC
GTGTCAGCTACCGCGCCTCCCCTTCTCT
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protein sequence of rna7159

>rna7159-protein ID=rna7159-protein|Name=rna7159|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
SLRPFSLPFLPSLVSLFLSVSSGDFLILSVLSPACLLAVFPPCLARPSHP
PLPSHNALSFFNIRNGGFFSLPRAISPLHFLFSQSTFLSFPLSFLFPSLC
PFLCPFLCPFLCPFLFLGLLY
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mRNA from alignment at CM002470.1:588423..589231-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7159 ID=rna7159|Name=rna7159|organism=Nannochloropsis gaditana|type=mRNA|length=809bp|location=Sequence derived from alignment at CM002470.1:588423..589231- (Nannochloropsis gaditana)
TCCCTCCGGCCTTTCTCCCTCCCTTTCCTCCCTTCTCTTGTTTCTCTCTT
CCTTTCTGTCTCCAGTGGAGATTTCCTTATACTTTCTGTCTTGTCACCGG
CTTGTCTCCTCGCGGTCTTTCCTCCCTGTCTGGCCAGACCCTCCCACCCC
CCTCTACCGTCACACAATGCTCTCTCTTTTTTTAATATAAGAAATGGAGG
ATTTTTCTCCCTTCCTCGTGCCATTTCGCCTCTTCACTTTCTCTTTTCCC
AATCGACTTTTCTCTCTTTCCCCCTCTCCTTCCTCTTCCCCTCTCTCTGT
CCCTTCCTCTGTCCCTTCCTCTGTCCCTTCCTCTGTCCCTTCCTCTTTTT
AGGTCTCCTCTATTGAAGCGCGGTACCCTCGTCTCAAGATCGACGTGGAG
GAACAGCTTGCCTACTATCGTGACGTAAGGCCTCCTTTCTTCCTTTCAAA
GCCTTCTTGTCCTCCTTGGCATCCCTTTTGACTTCTCGTTCTCCCTGCCG
CGGAGCCTTTCTTTGTGTGACGTTCTCATCCGTGGTCTTCCTCCGGTCCC
TCCTCTTCTTCTTTCCCTCCTCCCACCCCCCCTCTTGCCCCCCTTTTCCC
CTTCCTCCCTCCCCAGATTCGGCCCTCCCTGCTCCCGCTCATCCGCGACA
CGATCGAATTCACGAACGCCGCTTTTGACAGCGGGAAAAAGGTTTTGGTG
GAAGGCGCGAACGCCACCATGCTCGACATCGATTTCGGAACCTATCCTTA
CGTGACCTCCTCCAACCCCAGGTGGGAGGGAGGGAGGGAGGGAGGGAGCG
AGGGAGGGA
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Coding sequence (CDS) from alignment at CM002470.1:588423..589231-

>rna7159 ID=rna7159|Name=rna7159|organism=Nannochloropsis gaditana|type=CDS|length=366bp|location=Sequence derived from alignment at CM002470.1:588423..589231- (Nannochloropsis gaditana)
TCCCTCCGGCCTTTCTCCCTCCCTTTCCTCCCTTCTCTTGTTTCTCTCTT
CCTTTCTGTCTCCAGTGGAGATTTCCTTATACTTTCTGTCTTGTCACCGG
CTTGTCTCCTCGCGGTCTTTCCTCCCTGTCTGGCCAGACCCTCCCACCCC
CCTCTACCGTCACACAATGCTCTCTCTTTTTTTAATATAAGAAATGGAGG
ATTTTTCTCCCTTCCTCGTGCCATTTCGCCTCTTCACTTTCTCTTTTCCC
AATCGACTTTTCTCTCTTTCCCCCTCTCCTTCCTCTTCCCCTCTCTCTGT
CCCTTCCTCTGTCCCTTCCTCTGTCCCTTCCTCTGTCCCTTCCTCTTTTT
AGGTCTCCTCTATTGA
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Synonyms
Publications