rna7155, rna7155 (mRNA) Nannochloropsis gaditana

Overview
Namerna7155
Unique Namerna7155
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2309
Alignment locationCM002470.1:580626..581414 +

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100416g3.4405.mrna
Orig protein idgnl|cribi|Naga_100416g3.4405
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:580626..581414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100416g3gene6917Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7155rna7155-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23536.1cds7138Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7155 ID=rna7155|Name=rna7155|organism=Nannochloropsis gaditana|type=mRNA|length=2309bp
CCTGTCCATCTCGACCTTTCTGGGATTTTAGGAGGGAAGTCCTATTTGTA
AGCCGCTTGGAATTGTTGAAGACTCATCTCGGGTATGATTTACCGATGGG
AGTACTTATTTCACTTATGTTTTCGTAATGAAACTCAAAGCTGACGTCAA
AGAGATCCTCTGCTCCTAGCAGGAAAAAAATGGATGCAAATAAGGTCACA
AAGACGGCTAATAGATCGACTTTTGTACGACATAGACTCAACATTGTGCC
GTCTCATCCGGGGTCTGGAAAGCCAGTATTACGCGTCATACCAGCATGGA
GCTTTGAGCTTTTGATAAGTATGAAGTTCACGCAGTGATTGCCTTGCCAG
AAAAAGGTGTCTACGCAAATGATCGCCCGGTTGGGCGAAGTGTTTTTCCG
ACTGCCGCGCCCGTGTATGCGTCTCGTCAGGCATCAGAAGGTCCTGGAGG
CCCATTGCGCCCTGCACTTTACGGTGCGGTCATCCCTTTGTCGTTTCAAC
GTGGTTTTCGCAACCTGCCTTGTAAACATGCGCTCCCATTTTTCCACCTC
GGAACAGACAAGATGTCTGGCCTCAGTTATCGAGGGCGTACGAAAAGAAT
ATGGAAATCGTTCCCTGGTCCGACTTGGAGACATGAAATGTGACCAAGAG
CCCGCCGACGTGATTTCAACAGGGATCTTTGCCCTCGATCAAGCACTAGG
TATTGGTGGGCTGCCCCGCGGGCATTTGGTAGAGCTCTGCGGCCGCGATG
ATGCGGACGTTACGGCAATGGCGCTTTACATGATGGGAAGGGCCCAGGGA
GAAGGAGGCACTGCCGTGCTTGTCAACCACCACATCGCCCTCGACCTGGA
ACATCTCCGTGCACTCAAGGTGGATGTGGAGAACCTCTATATCGGACAGC
CAAATACCTGGGAGGAAGCATTGGAGATGGGCACTCGCCTCGTCGCATCC
CGGGTGGTGGATTGCGTGGTCATGGACGGGACTTTGGCGCCTTACCCTAC
CCGGAGGTTGCAGATGACCGGCGTTCAAAAGCTTCCAACAGCCATGTCGC
AATGGGTGAGACTGAACCAGGCCCTGTCCCGATCTCGATGCCTGCTTCTG
TGGCTGGGGCGGGCCCATGGGATGCCCGACCTTCGGGACGCGAGGGAGGC
AAGGGAGGAAGGAAGGACCGAGGTATGGGCCAGCTTCCCCTCGCTTCGGT
TGCGATGCGAGGAGATCGATCCGCTGGATCGTGGAGAATGGAGTGGACGG
GCGGGACGGAAAAGGGGTGGGGTGTCTTGTCGAAGCTCGGACGACGACCA
TTCGCTGTTTCGCAAGCGCCGAGGGCAGCCCCGGTACATCCGGGTAGGCG
TGGTAAGAAACATGCTGGCGACCCCGTCTGGGGCAGTGGAGGTGGACCTC
GTGAACGGAACAGAGCATGACAGGTCAGGAGCGACGAAGGAAGGAGAGAG
GGTAAAAGAACAAGGAGGAGCACTGGCCGCGGATGGACAAGCAGGGACGA
CGATGGTTGCACCCCTGCAAGGAAGGGAGGATAATCCCTCGATCTCAGAG
CACGTCGACCGGGGAAAAGAACAGGCGGAAATCGAAGAGCCTTTGCGTCG
GGCTTCGATCCATGTGCCCGCATGGACGAGTGGGGGAGGAGGTGGAGGAG
GCGACGGCGTGGATCTAGATATCGATTATCTCACCGGCGAGATCGGCAAT
GCACAAGCAGAGGCAGCGCTGACGGGCTCCGACGCAGGAAGGGGAAAGAG
GGAAGGAGGGACGGGGTAGCGGGGCAGAAGAGGCCGGAGTGGATGCAATT
GAGAGAACAGTGAGCCACAGGAGAGCAACATGTTCTTTGCTTGGATGTAT
GGCTTGTGGGCCGAGCCCCAGTGGAGGAGGGTGCTAACGTTAACGTCTGT
GGCGTGTGACAAAGAATAATGCTCGCTCCCATCTTAAACCATGCTTGGGA
CTCGGCGCGGGATGATACTTGTTGTTACAGAGGGGAGATGGCGGCTGTGG
AAGGAAAAACAATGCTGTACCGACTTGATAACGGTTGCCTTGACCGAATG
AAGGTAGTTACGAGATTTGATAGTCGCTCTCATCAGCTCTCAGTCCAGGA
TATGCAGAAGAAACCACGACACAGCACTGTTAAAAAAGGTCTTGCTCTAT
ACGAAGTTATCTGTCTAAAACCAATATGTTCCATATGATTCTGAGGAGCC
CAAATAAAGCAAGTATGTTTCCAAATATTCTGACGAGGACGAATGGATGG
GTGTCAGGCTCGCGGAAAACGAGCGGGAGGAAAGATAAAAGCAAGAACGG
ACTCTTAAG
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protein sequence of rna7155

>rna7155-protein ID=rna7155-protein|Name=rna7155|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MDSGGLYEDLDIPPAVVATQELEARLDAAYSRIATLEQKAALVGKECVTL
RKENDVLRVNISSLYKTAKRELERKETEVIKLREQVQSWQGGGRRGGEGK
EAHGDDTSGCERGEGGREGGWQEDPMGEEGVGRDERKRGTRVWR
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mRNA from alignment at CM002470.1:580626..581414+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7155 ID=rna7155|Name=rna7155|organism=Nannochloropsis gaditana|type=mRNA|length=789bp|location=Sequence derived from alignment at CM002470.1:580626..581414+ (Nannochloropsis gaditana)
TTGCCTGGTGATTCCACAACAATACGCGCCCGACCTCCTTTCTAACTTTA
CTTATTACTTTCTATTCTTTCCGCATGCTTTTAGGCCACTCGCGTACCCG
ATCTCGTCGTAGCTATCATTATCAATGGATAGTGGTGGCCTATATGAAGA
CTTAGATATTCCCCCTGCGGTGGTAGCTACACAAGAATTGGAAGCGCGCT
TAGATGCCGCCTACTCCCGCATCGCGACGCTGGAACAAAAAGCGGCTCTG
GTAGGAAAAGAATGCGTAACTTTACGGAAGGAAAATGACGTGCTTCGAGT
TAATATCTCATCGCTTTATAAAACGGCCAAGCGGGAattggaaaggaaag
agacagaagTAATCAAATTGAGAGAACAGGTGCAAtcatggcagggagga
ggaagacgaggaggggaaggtaaAGAAGCACATGGCGATGATACAAGTGg
atgtgaaagaggagaaggaggaagggaaggaggatggcaagaagaCCcaa
tgggagaagaaggagttgggagggacgaaaggaagagagggacgcgGGTG
TGGAGATGACACATTGCTTTAAAGttcgaaaaagaaaaaagcctTCGGGG
CTTGCCGTCACATGGTCTGTTTCTCCCAAGGCTATCATGTCCGCTCTTCA
TTCTCTCAAACTTACAATTCATTAGCAGCATAATGGCTACGTCAGATCAG
CAGAGAGAAAAGCTGAACCTCAAAGGACACCCGGGACAGATCCCGGCGTG
CTCGCCCTGCTCTTACACGCACGTCGCATCAATTTAGGG
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Coding sequence (CDS) from alignment at CM002470.1:580626..581414+

>rna7155 ID=rna7155|Name=rna7155|organism=Nannochloropsis gaditana|type=CDS|length=435bp|location=Sequence derived from alignment at CM002470.1:580626..581414+ (Nannochloropsis gaditana)
ATGGATAGTGGTGGCCTATATGAAGACTTAGATATTCCCCCTGCGGTGGT
AGCTACACAAGAATTGGAAGCGCGCTTAGATGCCGCCTACTCCCGCATCG
CGACGCTGGAACAAAAAGCGGCTCTGGTAGGAAAAGAATGCGTAACTTTA
CGGAAGGAAAATGACGTGCTTCGAGTTAATATCTCATCGCTTTATAAAAC
GGCCAAGCGGGAattggaaaggaaagagacagaagTAATCAAATTGAGAG
AACAGGTGCAAtcatggcagggaggaggaagacgaggaggggaaggtaaA
GAAGCACATGGCGATGATACAAGTGgatgtgaaagaggagaaggaggaag
ggaaggaggatggcaagaagaCCcaatgggagaagaaggagttgggaggg
acgaaaggaagagagggacgcgGGTGTGGAGATGA
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Synonyms
Publications