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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101044g1.3111.mrna |
| Orig protein id | gnl|cribi|Naga_101044g1.3111 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:570573..572713 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7151 ID=rna7151|Name=rna7151|organism=Nannochloropsis gaditana|type=mRNA|length=2164bp
CGTACAGGTGGTGTGGAGTTTGTCTTCCTCCTGCCAGCTTGGACGCATTG
TGAAGGGCCCAAATGGAGGGAGCTGGCACCTTTCCTCGCCCCTCCCTTCC
AAGCGTCACCCGGGCTCTGTACGAGCGAGTAATACCCAATGATCATCCGG
TGCTGCTTCCCGCGGATAATCTGGTCATGGGCGCACGAAAAGCCTCAAAC
AGCGGAAGAGAAAGCAGTGGACAAAGGTGGGATGACAAAGGGGAGCAAAG
CCTGTTAAACCCCTTATATGTCATGAAGCAAGCGGAGGCCATTGCGAGGT
AGGGGGAGGCTAAACACTTCCCGGTCTGGGGGTAAGGAGAACATTGAGCC
TCTCACCGAGAAGAAAAATGGGAATTTTTCCGGAAACAATTGTAAGAGAG
TCCTGCAATATTTGTGACCGATGTGAAAGCGAAAGAGAGAGAATACGGGC
GAGATTCTTGCTCACATGAGGAAGGACAGTACTGCCGAGGAGGGTGAAGC
TTATACGCGAGGAGGGCGCAACTGGGGTTGCGGCATCACAAAACCTCACA
TCTTTATCTTAAAAACCCTCGCATCGGTTTTCAACCTCTCTCTCCCTCCA
TTTCCCCACATGTTTCCCCGCTTCCCTCCTTCCCTCCCCCCCTCCTTCCC
TTCCTTGACCAGCGACGCTGTCGGCCGTCAGTTCGAAGCACTCGCCTCCG
TCCTCCCACACCTCCCCTCCTACTCCTTGTCGTCCCTGGCTCTCTTCACC
CGCCAGCTTCTCCAACTCTTCCTCCTCGCCAAAAGCCCGACCTATCGGGC
ATTGCTCGTCGGGTTTTTGGAAACGGTGGATTGGCCGTTACTCACGGCCG
TGGCCGCGGAAGCCCGGCGAGCGCCCTCTTCTCGGCCTTGTTCAGGCGCT
TTGGGGAAGCGAGGGGTGGAGGGAGAGAGGGGAAGCGGAGGAAGAGGCAC
GGGGGGAGGGGAGGATCCTGTCGGACGCCGAGCTCACTTTCCTACATCGG
ACGCCCCCTCGATTTCCTCCCCCGCCCCTGCCGTCAGTACCCTCGCCTCC
CCCTCCCTCCTCCCCTCCCTCCCCAACCTCCTCCGCCACCTCCTCAACGA
CGAGAGCCAGGCCGACGTCCAGCGCCGGTCCCTCTCCCTCCGCCTCCTCG
GTCTCCTGGCCCATCCCACCGCCTCCCCGAACCTCCACCTCCCTTCCCTC
CTCATCGACACCTCCCTTCCCTCCCTCATCCCCGGCATCCCTTCAGCGGC
CTGCACTGCCCTCTCTACCCTCGCCCGACAACACCCGCCCTTCCTCTCTC
GCTCCCTCCTTCCCTCCCTCGAAGCCATCCTCCTCTCCGACACGCACGCG
TTGGACGAAGCAGCGAAACGCCCTTTGCTAGAATCCTGCGCCTGCCTCGC
TGCCTCCGTCTTCCCCCTCCCTCCCGCCCACCCTCCTTCCCTCCCACCCT
TGGAGGCTTCGCCCCGGCCCTCGGACTGGGTCCGTGCCCGGAACCTCCTC
CTTCAGGCCCTCCCTCGCCTTCACGCTCCTTCCACGCACATCACGGCCTT
GAGCTCCCTCACTGCCTTGGGACGCGACCGGTGGCTCTCTCCTCGCCGCC
AAAAGGCCGAGGAAGGGGGCCTTGCAAACAGGGAGGAGGGAGGGGAGGGG
AACGACGAGGTGCTTCCCATCCTCACTGCCCTGGTCGACCACGTGAGGAC
GGGCCTGGCGGTGGGCCCGTACGTGTCAGAGCACGCTTCCCTGTGTGCGC
TTCGCCTCCTTCGTGCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCTTCAA
CGGCCCATCCTTACCGCCCTCCTCAAACGGTTATTTGAAACGCCGCCGTT
GTATAACGGCTCCCTCCTGGCCAGCTACCTCCGTCTCCTGGGTGCCCTCT
CCCTCACCACACACCCCTCCACTTCCTCCTCCCCCCCCTCCATCGCTGCC
TCCATCCTCTCAGCCCTGGTCGCGGACGATCTCCTGGTATGGATCCTTCC
CTCCTCCTCCCCTCCTCCCGTCCCATTGCCACCACGGGCAGGGAGGGAGG
GAGGGCGGGAGGGAGGGCGGTCGCTGGCAACGAGTGCGCAGGAGGAGGCG
ATGGTTCGCTTGGTGTGGACCCAGGCACTTGCCTCCACGCTGGTACGAGT
CGATGCCGAGGGAG back to topprotein sequence of rna7151 >rna7151-protein ID=rna7151-protein|Name=rna7151|organism=Nannochloropsis gaditana|type=polypeptide|length=636bp
MGAWVTLLRVFRGTVRDQEALLSSLPPSLLPSIPPSLPPSFPPSVKEEAE
AHASKRRRMMSTDEEGGSHGHHPNVMPPGLPASTPPSLPPSVGTSPWARY
QLAREALLLGYFPLAHRLLLPFLPPSLSLSSERTQEWLGALASISKAETL
FGASAASCLPPSSPPSTPPSLPSSERDVCDEDVVRPTLRHALLLLQHLER
LPSSPSSFPFSFPSFPRRYLLARLHFLSLLTFLRTLLRERYLLPPLPPYH
LHSRADRYHSRFPRACQRLEGRMWRLYREEGGGDPQSRWCLRIVMGMVRF
LERVYRVLVMGEKEGEGGREAGREGDREGGKGGRRKNPHWPSGNLPSAAS
CPMLHACRHLEKQFEQIALPPALPPALPLALRHMAQIELSLAQIPWPYPR
RFLYPRSLPPWSLDMYVFPVDPEDDEEEGEKEGGREGGREGGRGIEWPEG
RGRIWEAGGGEEEVEWRKDNDRVEVEYGEEIRLAVVGILRHVPPGARGGL
ATVRVLVSVTDVEDGAVGEGEGGEGDVDKGSTQGMTQGQPDPPRRYTAPC
LSQPRPQTGERFCFRALLTSPLDKEDGTFPACVLTLPRGVLPRRGMYTLL
LEGRVLDAGGRAWTMTPEGGGGKRKISLICGVDGGW back to topmRNA from alignment at CM002470.1:570573..572713+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7151 ID=rna7151|Name=rna7151|organism=Nannochloropsis gaditana|type=mRNA|length=2141bp|location=Sequence derived from alignment at CM002470.1:570573..572713+ (Nannochloropsis gaditana)
AAATGGGCGCGTGGGTGACATTACTGCGAGTCTTCCGAGGCACCGTCCGC
GATCAGgaggccctcctttcctccctccctccctccctccttccctccat
ccctccctccctccctccttccttcccgccctccgtcaaggaggaggcag
aggcccaCGCCTCGAAGCGTCGAAGGATGATGAGCacagacgaggaaggg
ggaagtcACGGTCATCACCCGAATGTCATgcctcctggcctccctgcctc
gaccccgccctctctccctccctccgtcggcACCTCCCCCTGGGCCCGCT
ACCAGCTGGCCCGCGAAGCACTCCTCCTGGGGtacttccccctcgcccac
cgcctcctccttcccttcctccctccctccctctccctctcctccgagag
GACCCAGGAATGGCTGGGCGCCCTGGCATCCATCAGCAAGGCCGAGACCC
TCTTCggcgcctccgccgcttcctgcctcccgccctcctcccctccctcc
acccctccttccctcccttcctcagaGCGGGACGTCTGCGACGAAGATGT
GGTGCGACCCACCCTGcgtcatgccctcctcctcttgcaacACCTGGAAc
ggctgccctcctccccttcctccttcccgttctccttcccttccttcccc
cgccgctACCTTCTGGCTCgactccacttcctctccctcttaaCCTTCCT
CCGGACACTTCTTCGTGAACgctatctcctccctcccctccctccttacc
acCTCCACTCCCGCGCCGACCGGTACCACAGCCGTTTCCCCCGGGCCTGC
CAACGGCTGGAGGGACGTATGTGGCGGCTGtatcgggaggaaggaggggg
agatccTCAGTCCCGATGGTGCCTGCGGATAGTCATGGGTATGGTTCGAT
TCCTGGAACGGGTCTACCGGGTCCTAGTCatgggcgagaaggagggcgaa
ggagggagggaagcaggaagggagggagacagggaaggagggaagggagg
caggaggaaaaaccCGCACTGGCCGAGCGGGAATCTCCCTTCCGCTGCTT
CCTGCCCGATGTTGCACGCCTGCCGCCATCTGGAAAAGCAGTTCGAGCAa
attgcccttcctcccgccctccctcccgccctccccctcgccctccgtca
cATGGCGCAAATCGAGCTGTCGCTCGCTCAAATACCGTGGCCCTACCCGC
GACGCTTCCTGtaccctcgctcccttcctccctggtccCTGGACATGTAC
GTTTTCCctgtggacccggaggatgacgaggaagaaggagagaaggaggg
agggagggagggagggagggagggagggaggggaattGAGTGGCccgaag
ggcgggggaggatctgggaggcaggaggaggcgaggaggaggttgaatGG
AGGAAAGACAATGACCGAGTGGAGGTGGAGTACGGGGAAGAGATCCGTTT
GGCGGTGGTAGGAATCTTGCGGCATGTGCCACCTGGCGCGAGAGGGGGTC
TGGCAACCGTGCGGGTGCTGGTCTCGGTgacggacgtggaggacggggcg
gtgggggaaggagaggggggagagggggacgtggaCAAGGGTTCCACGCA
GGGCATGACGCAAGGGCAGCCAGATCCGCCGCGTCGGTATACTGCGCCTT
GTCTGTCTCAGCCTCGCCCCCAAACCGGGGAGCGGTTTTGTTTCCGTGCA
CTCCTTACCAGCCccttggacaaggaggacgggacgtTTCCAGCCTGTGT
CTTGACCCTTCCAAGAGGAGTTCTGCCCCGACGGGGTATGTATACCTTGC
TCTTGGAGGGAAGAGTCCTGGatgcgggggggcgggcttGGACGATGAcg
cccgagggaggaggggggaagaggaaaataaGCTTGATCTGTGGCGTGGA
TGGAGGGTGGTGAAGGGGATGAGGATTCAAATCCTGCTACACGTGTGCGA
GGAGAGAGTataagagggggagagcgaggctgTTATCAGTGATAGCGAAT
AATGACGGGAGGCCAGGATGAGTGAAATAGCTTGTACAGAAAAGGTCCCA
GGAGCATCGATGATACCATCATGTCAGCTACTGGAATCTATGTGCTTAGG
ATTCCTTCTTCGTAGGAGATAAAAAACTGTACATTTTACGA back to topCoding sequence (CDS) from alignment at CM002470.1:570573..572713+ >rna7151 ID=rna7151|Name=rna7151|organism=Nannochloropsis gaditana|type=CDS|length=1911bp|location=Sequence derived from alignment at CM002470.1:570573..572713+ (Nannochloropsis gaditana)
ATGGGCGCGTGGGTGACATTACTGCGAGTCTTCCGAGGCACCGTCCGCGA
TCAGgaggccctcctttcctccctccctccctccctccttccctccatcc
ctccctccctccctccttccttcccgccctccgtcaaggaggaggcagag
gcccaCGCCTCGAAGCGTCGAAGGATGATGAGCacagacgaggaaggggg
aagtcACGGTCATCACCCGAATGTCATgcctcctggcctccctgcctcga
ccccgccctctctccctccctccgtcggcACCTCCCCCTGGGCCCGCTAC
CAGCTGGCCCGCGAAGCACTCCTCCTGGGGtacttccccctcgcccaccg
cctcctccttcccttcctccctccctccctctccctctcctccgagagGA
CCCAGGAATGGCTGGGCGCCCTGGCATCCATCAGCAAGGCCGAGACCCTC
TTCggcgcctccgccgcttcctgcctcccgccctcctcccctccctccac
ccctccttccctcccttcctcagaGCGGGACGTCTGCGACGAAGATGTGG
TGCGACCCACCCTGcgtcatgccctcctcctcttgcaacACCTGGAAcgg
ctgccctcctccccttcctccttcccgttctccttcccttccttcccccg
ccgctACCTTCTGGCTCgactccacttcctctccctcttaaCCTTCCTCC
GGACACTTCTTCGTGAACgctatctcctccctcccctccctccttaccac
CTCCACTCCCGCGCCGACCGGTACCACAGCCGTTTCCCCCGGGCCTGCCA
ACGGCTGGAGGGACGTATGTGGCGGCTGtatcgggaggaaggagggggag
atccTCAGTCCCGATGGTGCCTGCGGATAGTCATGGGTATGGTTCGATTC
CTGGAACGGGTCTACCGGGTCCTAGTCatgggcgagaaggagggcgaagg
agggagggaagcaggaagggagggagacagggaaggagggaagggaggca
ggaggaaaaaccCGCACTGGCCGAGCGGGAATCTCCCTTCCGCTGCTTCC
TGCCCGATGTTGCACGCCTGCCGCCATCTGGAAAAGCAGTTCGAGCAaat
tgcccttcctcccgccctccctcccgccctccccctcgccctccgtcacA
TGGCGCAAATCGAGCTGTCGCTCGCTCAAATACCGTGGCCCTACCCGCGA
CGCTTCCTGtaccctcgctcccttcctccctggtccCTGGACATGTACGT
TTTCCctgtggacccggaggatgacgaggaagaaggagagaaggagggag
ggagggagggagggagggagggagggaggggaattGAGTGGCccgaaggg
cgggggaggatctgggaggcaggaggaggcgaggaggaggttgaatGGAG
GAAAGACAATGACCGAGTGGAGGTGGAGTACGGGGAAGAGATCCGTTTGG
CGGTGGTAGGAATCTTGCGGCATGTGCCACCTGGCGCGAGAGGGGGTCTG
GCAACCGTGCGGGTGCTGGTCTCGGTgacggacgtggaggacggggcggt
gggggaaggagaggggggagagggggacgtggaCAAGGGTTCCACGCAGG
GCATGACGCAAGGGCAGCCAGATCCGCCGCGTCGGTATACTGCGCCTTGT
CTGTCTCAGCCTCGCCCCCAAACCGGGGAGCGGTTTTGTTTCCGTGCACT
CCTTACCAGCCccttggacaaggaggacgggacgtTTCCAGCCTGTGTCT
TGACCCTTCCAAGAGGAGTTCTGCCCCGACGGGGTATGTATACCTTGCTC
TTGGAGGGAAGAGTCCTGGatgcgggggggcgggcttGGACGATGAcgcc
cgagggaggaggggggaagaggaaaataaGCTTGATCTGTGGCGTGGATG
GAGGGTGGTGA back to top
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