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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100961g1.3622.mrna |
| Orig protein id | gnl|cribi|Naga_100961g1.3622 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:566287..568118 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7149 ID=rna7149|Name=rna7149|organism=Nannochloropsis gaditana|type=mRNA|length=1127bp
CTCATGTTGACCTGTGACACACCCTTGTTATATCCACAGCCTTTCCTTTC
ACTCTTCTGCCCTCTCTGGTCAAGATGCTTTCCCGCCTTGCCCTCACGAT
GCGCTCCAGCCTGGCTGTGACTGCTCGAGCTTGCAGCAGCAGCAGCACCA
CACCCACTATCCATCAAGGCACCGTCCGGGCGTTTGACTCCCGTCGAGGC
TATGGCTTCATCACGCCGGAGGATGGGTCAGAGGACGTGTTTCTGCACCA
GACACAAATTAGGCGGGTGGGCTTCCGTTTTGTCAATACAGGGGAAGTGG
TGGAATTTCAAATGGTGCAAGGAGACAAAGGTCGCCGGGCGGTCAATGTG
ACGGCCCCGGGGGGGGAGGCGCTTCCTCCCAGGAATAACGCGGACCGCCC
CATGGGCTCGAGGGGGGGAGACTACTCGGGGCCGAGAGAGTAAGGGAGGG
AGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGCAGGGAA
GGAAGGAGGACTGCGAGGGGAGGGGGTTTAGGGGTTTTGCGAGAAGGACG
AAGGCACAAGAGTGCAAGTGAGGACGGCAAGGTCCTGAGAAAGCGGAGGC
GTAGGGAGGTGGGCTCCAAGTGGAAGGGAGGGAGGAAGGAAGGGAGAGGG
TGAGGAGGAGGGAAGAAAGGAGGGAGGGGGTGAGGGGAAGAGGGGGGGAA
GAGGGCGTTGTTTGTTTTTCGCGCAATATTTACAGCAATCGACGCTATCT
CTCTCGAAGCACGCCCCTCGATTTGTTTCCATCTCTCTGTGTGGAAGGTG
TTGTGAAGCGTGCAAGGAAAACGATCAAAGGGATGCTCCAGGATCGGGAA
AGGCACGAAAGCAGGATGGTAGGGAGAGGAGGTGAGGGATCAAGACCAAG
AGGAGAGGGGGAAGGAGGCAAGGAGGGAAGGAAGGAGGGAGGGAGGAGGA
GTATTCGACCCCGGGTAAAAGGGAAGAGAGGGATGTAGGGCATTCAGCAT
GATCGGAGGAAAGGCTGCTGCAACCAAAGAATGATGACGGCACCTGCAGG
CTGTTGGAGATGGGCTCACTCCCTTTATCCCTTTCGGCCGCCCGTCTATT
GTCTTGTTTCCGCTTGAGATTGCTGCC back to topprotein sequence of rna7149 >rna7149-protein ID=rna7149-protein|Name=rna7149|organism=Nannochloropsis gaditana|type=polypeptide|length=533bp
MGRRHPPFRWIKGKIKGLVFRFCMIGHLPGLGRSSPPAFATTSSTCLSLS
IPCMSLASVTSGSTTAICSPSISPGVCGFIPTTRPLSPHRRPCLLPLLLN
VRGGASSANSFGTDASKGSNADSIPSIESVTDPAEEAESEETLAQSLKEA
IRLENDDITSVYAPSDAEALRNGHEGTEVPQWSIAEEEADGEGEGKEDDE
VGAGRPVPMSSLPLTERTAFVIIDPFSPFLGRYLKRRAQAMGLVCIDVLS
PYTVASLQDGPRKWRAPWPGAEKKWAAHLPAFKRVAFVLSESDHGAATAE
RMHAAVGAPGNGVNPTRRNKYLTNRALQARGVGYTRQILAETWEEAEAFV
RNQLLPTHPTSSISATPSFSSSPPPSSPPSFSSSSFSSPPPLPSSSSSSS
SSPSSVPLAVVKPVRGAASGDVHVCQDLPSIRIAFQAIKDSPKYGGGVNT
QVLLQEYLLGEEFAVDTVSCNGSHKVTAVWRYDKRPVNGAPCVYHATILR
AAEAGSEEERVCEYVLQEVLPAMDIKWGPTHTE back to topmRNA from alignment at CM002470.1:566287..568118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7149 ID=rna7149|Name=rna7149|organism=Nannochloropsis gaditana|type=mRNA|length=1832bp|location=Sequence derived from alignment at CM002470.1:566287..568118- (Nannochloropsis gaditana)
AGGAATGGGACGGAGGCATCCACCTTTCCGGTGGATCAAAGGGAAAATTA
AGGGCCTGGTGTTTCGGTTTTGCATGATTGGCCATCTCCCTGGGCTGGGG
AGGTCAAGTCCCCCTGCCTTCGCCACCACCTCCTCTACCTGTCTCTCCCT
CTCTATCCCGTGCATGTCTTTGGCTTCTGTCACCTCAGGAAGTACCACAG
CAATATGCTCCCCCTCAATATCCCCTGGGGTGTGTGGTTTCATCCCCACG
ACCAGACCTTTGTCTCCACACAGACGACCTTGCCTCCTCCCCTTGCTCCT
GAACGTCCGAGGAGGGGCATCTTCAGCAAATTCTTTCGGCACTGACGCAA
GTAAGGGTAGTAATGCTGACTCAATTCCATCAATAGAGTCCGTGACGGAC
CCTGCAGAAGAGGCAGAAAGTGAAGAAACCCTCGCCCAGAGCCTGAAAGA
GGCCATCCGCCTTGAGAACGACGACATCACGTCGGTGTACGCTCCCAGTG
ACGCGGAGGCCCTGCGGAATGGACACGAAGGAACGGAGGTTCCTCAATGG
TCCATAGCGGAGGAGGAGGCGGATGGAGAGGGGGAAGGGAAGGAAGACGA
CGAGGTGGGGGCAGGGAGGCCGGTCCCGATGTCTTCCCTCCCCCTCACTG
AGCGCACCGCCTTCGTAATCATCGACCCTTTCTCCCCTTTCCTCGGCCGA
TATTTGAAACGGCGGGCACAGGCCATGGGCCTCGTTTGCATCGACGTCCT
CTCCCCGTACACGGTGGCCAGCCTCCAGGACGGCCCCCGGAAGTGGCGGG
CGCCGTGGCCGGGAGCCGAAAAAAAATGGGCGGCCCATCTCCCTGCCTTC
AAACGCGTGGCGTTTGTGTTGTCCGAGTCCGACCACGGGGCGGCCACGGC
CGAACGGATGCACGCGGCCGTGGGGGCGCCGGGGAACGGGGTAAATCCTA
CCCGGAGGAACAAGTACCTGACGAACAGGGCCCTCCAGGCCCGCGGCGTC
GGTTACACCCGGCAGGTGCGCCGTTGAGAATTTGAAATTTTTAACGAGAA
CATGATGCGTGGGGACCACATACTCTTTCCTACCGCCTCCTCCGTCAGCC
ACACTCTGGTATGGCCTCTTTCTACCTCCTCACGGGCTCCCTTCCCTCCT
CCTCATCACCTTCAGATCCTAGCCGAGACTTGGGAGGAAGCCGAAGCCTT
TGTCCGCAATCAACTCCTCCCCACCCATCCCACGTCCTCCATATCTGCCA
CCCCCTCCTTCTCCTCCTCCCCTCCTCCCTCCTCCCCTCCCTCCTTCTCC
TCCTCCTCCTTCTCCTCCCCCCCCCCCCTCCCTTCCTCCTCCTCCTCCTC
CTCCTCCTCCCCCTCCTCGGTGCCCCTCGCCGTGGTCAAGCCCGTCCGAG
GCGCCGCCAGTGGTGACGTCCATGTCTGCCAGGACCTTCCCTCCATCCGC
ATCGCCTTCCAGGCCATCAAGGACAGCCCTAAATACGGCGGAGGCGTCAA
CACCCAAGTCCTCCTCCAGGAATACTTGCTTGGGGAGGAGTTCGCCGTCG
ATACCGTTTCCTGCAACGGCTCCCACAAAGTAACGGCGGTTTGGCGATAC
GATAAACGGCCCGTGAACGGCGCGCCCTGCGTCTACCACGCCACCATTTT
GCGGGCGGCAGAGGCAGGGAGTGAGGAGGAGCGAGTGTGCGAGTACGTAT
TGCAGGAGGTGCTGCCGGCGATGGACATCAAGTGGGGGCCCACGCACACG
GAGGTAGGAAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAAAGAGGGAGGATGGGTGACAGTAG back to topCoding sequence (CDS) from alignment at CM002470.1:566287..568118- >rna7149 ID=rna7149|Name=rna7149|organism=Nannochloropsis gaditana|type=CDS|length=4806bp|location=Sequence derived from alignment at CM002470.1:566287..568118- (Nannochloropsis gaditana)
TAGATCCTAGCCGAGACTTGGGAGGAAGCCGAAGCCTTTGTCCGCAATCA
ACTCCTCCCCACCCATCCCACGTCCTCCATATCTGCCACCCCCTCCTTCT
CCTCCTCCCCTCCTCCCTCCTCCCCTCCCTCCTTCTCCTCCTCCTCCTTC
TCCTCCCCCCCCCCCCTCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCC
CTCCTCGGTGCCCCTCGCCGTGGTCAAGCCCGTCCGAGGCGCCGCCAGTG
GTGACGTCCATGTCTGCCAGGACCTTCCCTCCATCCGCATCGCCTTCCAG
GCCATCAAGGACAGCCCTAAATACGGCGGAGGCGTCAACACCCAAGTCCT
CCTCCAGGAATACTTGCTTGGGGAGGAGTTCGCCGTCGATACCGTTTCCT
GCAACGGCTCCCACAAAGTAACGGCGGTTTGGCGATACGATAAACGGCCC
GTGAACGGCGCGCCCTGCGTCTACCACGCCACCATTTTGCGGGCGGCAGA
GGCAGGGAGTGAGGAGGAGCGAGTGTGCGAGTACGTATTGCAGGAGGTGC
TGCCGGCGATGGACATCAAGTGGGGGCCCACGCACACGGAGATGGGACGG
AGGCATCCACCTTTCCGGTGGATCAAAGGGAAAATTAAGGGCCTGGTGTT
TCGGTTTTGCATGATTGGCCATCTCCCTGGGCTGGGGAGGTCAAGTCCCC
CTGCCTTCGCCACCACCTCCTCTACCTGTCTCTCCCTCTCTATCCCGTGC
ATGTCTTTGGCTTCTGTCACCTCAGGAAGTACCACAGCAATATGCTCCCC
CTCAATATCCCCTGGGGTGTGTGGTTTCATCCCCACGACCAGACCTTTGT
CTCCACACAGACGACCTTGCCTCCTCCCCTTGCTCCTGAACGTCCGAGGA
GGGGCATCTTCAGCAAATTCTTTCGGCACTGACGCAAGTAAGGGTAGTAA
TGCTGACTCAATTCCATCAATAGAGTCCGTGACGGACCCTGCAGAAGAGG
CAGAAAGTGAAGAAACCCTCGCCCAGAGCCTGAAAGAGGCCATCCGCCTT
GAGAACGACGACATCACGTCGGTGTACGCTCCCAGTGACGCGGAGGCCCT
GCGGAATGGACACGAAGGAACGGAGGTTCCTCAATGGTCCATAGCGGAGG
AGGAGGCGGATGGAGAGGGGGAAGGGAAGGAAGACGACGAGGTGGGGGCA
GGGAGGCCGGTCCCGATGTCTTCCCTCCCCCTCACTGAGCGCACCGCCTT
CGTAATCATCGACCCTTTCTCCCCTTTCCTCGGCCGATATTTGAAACGGC
GGGCACAGGCCATGGGCCTCGTTTGCATCGACGTCCTCTCCCCGTACACG
GTGGCCAGCCTCCAGGACGGCCCCCGGAAGTGGCGGGCGCCGTGGCCGGG
AGCCGAAAAAAAATGGGCGGCCCATCTCCCTGCCTTCAAACGCGTGGCGT
TTGTGTTGTCCGAGTCCGACCACGGGGCGGCCACGGCCGAACGGATGCAC
GCGGCCGTGGGGGCGCCGGGGAACGGGGTAAATCCTACCCGGAGGAACAA
GTACCTGACGAACAGGGCCCTCCAGGCCCGCGGCGTCGGTTACACCCGGC
AGTAGATCCTAGCCGAGACTTGGGAGGAAGCCGAAGCCTTTGTCCGCAAT
CAACTCCTCCCCACCCATCCCACGTCCTCCATATCTGCCACCCCCTCCTT
CTCCTCCTCCCCTCCTCCCTCCTCCCCTCCCTCCTTCTCCTCCTCCTCCT
TCTCCTCCCCCCCCCCCCTCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCC
CCCTCCTCGGTGCCCCTCGCCGTGGTCAAGCCCGTCCGAGGCGCCGCCAG
TGGTGACGTCCATGTCTGCCAGGACCTTCCCTCCATCCGCATCGCCTTCC
AGGCCATCAAGGACAGCCCTAAATACGGCGGAGGCGTCAACACCCAAGTC
CTCCTCCAGGAATACTTGCTTGGGGAGGAGTTCGCCGTCGATACCGTTTC
CTGCAACGGCTCCCACAAAGTAACGGCGGTTTGGCGATACGATAAACGGC
CCGTGAACGGCGCGCCCTGCGTCTACCACGCCACCATTTTGCGGGCGGCA
GAGGCAGGGAGTGAGGAGGAGCGAGTGTGCGAGTACGTATTGCAGGAGGT
GCTGCCGGCGATGGACATCAAGTGGGGGCCCACGCACACGGAGATGGGAC
GGAGGCATCCACCTTTCCGGTGGATCAAAGGGAAAATTAAGGGCCTGGTG
TTTCGGTTTTGCATGATTGGCCATCTCCCTGGGCTGGGGAGGTCAAGTCC
CCCTGCCTTCGCCACCACCTCCTCTACCTGTCTCTCCCTCTCTATCCCGT
GCATGTCTTTGGCTTCTGTCACCTCAGGAAGTACCACAGCAATATGCTCC
CCCTCAATATCCCCTGGGGTGTGTGGTTTCATCCCCACGACCAGACCTTT
GTCTCCACACAGACGACCTTGCCTCCTCCCCTTGCTCCTGAACGTCCGAG
GAGGGGCATCTTCAGCAAATTCTTTCGGCACTGACGCAAGTAAGGGTAGT
AATGCTGACTCAATTCCATCAATAGAGTCCGTGACGGACCCTGCAGAAGA
GGCAGAAAGTGAAGAAACCCTCGCCCAGAGCCTGAAAGAGGCCATCCGCC
TTGAGAACGACGACATCACGTCGGTGTACGCTCCCAGTGACGCGGAGGCC
CTGCGGAATGGACACGAAGGAACGGAGGTTCCTCAATGGTCCATAGCGGA
GGAGGAGGCGGATGGAGAGGGGGAAGGGAAGGAAGACGACGAGGTGGGGG
CAGGGAGGCCGGTCCCGATGTCTTCCCTCCCCCTCACTGAGCGCACCGCC
TTCGTAATCATCGACCCTTTCTCCCCTTTCCTCGGCCGATATTTGAAACG
GCGGGCACAGGCCATGGGCCTCGTTTGCATCGACGTCCTCTCCCCGTACA
CGGTGGCCAGCCTCCAGGACGGCCCCCGGAAGTGGCGGGCGCCGTGGCCG
GGAGCCGAAAAAAAATGGGCGGCCCATCTCCCTGCCTTCAAACGCGTGGC
GTTTGTGTTGTCCGAGTCCGACCACGGGGCGGCCACGGCCGAACGGATGC
ACGCGGCCGTGGGGGCGCCGGGGAACGGGGTAAATCCTACCCGGAGGAAC
AAGTACCTGACGAACAGGGCCCTCCAGGCCCGCGGCGTCGGTTACACCCG
GCAGTAGATCCTAGCCGAGACTTGGGAGGAAGCCGAAGCCTTTGTCCGCA
ATCAACTCCTCCCCACCCATCCCACGTCCTCCATATCTGCCACCCCCTCC
TTCTCCTCCTCCCCTCCTCCCTCCTCCCCTCCCTCCTTCTCCTCCTCCTC
CTTCTCCTCCCCCCCCCCCCTCCCTTCCTCCTCCTCCTCCTCCTCCTCCT
CCCCCTCCTCGGTGCCCCTCGCCGTGGTCAAGCCCGTCCGAGGCGCCGCC
AGTGGTGACGTCCATGTCTGCCAGGACCTTCCCTCCATCCGCATCGCCTT
CCAGGCCATCAAGGACAGCCCTAAATACGGCGGAGGCGTCAACACCCAAG
TCCTCCTCCAGGAATACTTGCTTGGGGAGGAGTTCGCCGTCGATACCGTT
TCCTGCAACGGCTCCCACAAAGTAACGGCGGTTTGGCGATACGATAAACG
GCCCGTGAACGGCGCGCCCTGCGTCTACCACGCCACCATTTTGCGGGCGG
CAGAGGCAGGGAGTGAGGAGGAGCGAGTGTGCGAGTACGTATTGCAGGAG
GTGCTGCCGGCGATGGACATCAAGTGGGGGCCCACGCACACGGAGATGGG
ACGGAGGCATCCACCTTTCCGGTGGATCAAAGGGAAAATTAAGGGCCTGG
TGTTTCGGTTTTGCATGATTGGCCATCTCCCTGGGCTGGGGAGGTCAAGT
CCCCCTGCCTTCGCCACCACCTCCTCTACCTGTCTCTCCCTCTCTATCCC
GTGCATGTCTTTGGCTTCTGTCACCTCAGGAAGTACCACAGCAATATGCT
CCCCCTCAATATCCCCTGGGGTGTGTGGTTTCATCCCCACGACCAGACCT
TTGTCTCCACACAGACGACCTTGCCTCCTCCCCTTGCTCCTGAACGTCCG
AGGAGGGGCATCTTCAGCAAATTCTTTCGGCACTGACGCAAGTAAGGGTA
GTAATGCTGACTCAATTCCATCAATAGAGTCCGTGACGGACCCTGCAGAA
GAGGCAGAAAGTGAAGAAACCCTCGCCCAGAGCCTGAAAGAGGCCATCCG
CCTTGAGAACGACGACATCACGTCGGTGTACGCTCCCAGTGACGCGGAGG
CCCTGCGGAATGGACACGAAGGAACGGAGGTTCCTCAATGGTCCATAGCG
GAGGAGGAGGCGGATGGAGAGGGGGAAGGGAAGGAAGACGACGAGGTGGG
GGCAGGGAGGCCGGTCCCGATGTCTTCCCTCCCCCTCACTGAGCGCACCG
CCTTCGTAATCATCGACCCTTTCTCCCCTTTCCTCGGCCGATATTTGAAA
CGGCGGGCACAGGCCATGGGCCTCGTTTGCATCGACGTCCTCTCCCCGTA
CACGGTGGCCAGCCTCCAGGACGGCCCCCGGAAGTGGCGGGCGCCGTGGC
CGGGAGCCGAAAAAAAATGGGCGGCCCATCTCCCTGCCTTCAAACGCGTG
GCGTTTGTGTTGTCCGAGTCCGACCACGGGGCGGCCACGGCCGAACGGAT
GCACGCGGCCGTGGGGGCGCCGGGGAACGGGGTAAATCCTACCCGGAGGA
ACAAGTACCTGACGAACAGGGCCCTCCAGGCCCGCGGCGTCGGTTACACC
CGGCAG back to top
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