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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100339g2.6966.mrna |
| Orig protein id | gnl|cribi|Naga_100339g2.6966 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:559735..561306 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7147 ID=rna7147|Name=rna7147|organism=Nannochloropsis gaditana|type=mRNA|length=1753bp
AAGAAGCCACATCACAAGGCCAGAATTGAAGCTGCTTCCTCCCCCCTTTC
TCCCCACCCGATGCCTTTCAATATAACGGAGTCGATGAACGCACAGTATT
TCAGGGGGGGAGAGCCAGGGCTGTGCGATGGCTTGGGAGGTTCGGGCATG
CGGGTGAGGAGGAGGGAGGGCCCCGAACCTCCTCCTGAAGCTGTTGCAGA
TTATGCCTATGCCCCTTTAAGGGACATATACAAGGCAGGGGTGCCCAGGA
AAGTATGTCCGAGTGTCTGTATGCCTATTTGGGGATTTTTTTCGCAAGTT
TCGTGGGAAATTCGATTTGGACGTGGATTTGGTACTCGAACATGTTCAGT
TAAGCACCCGTCGATCATTCTTTGACTCCCTCCCTCCCCCGCCCCTAAAC
CCCCGGCTCAACAATATGAAAGTTCTACTCTCTCGACACTTGAGCATCAT
AATGTCCACTGTCAGTGCACTTTCAAGTTCCTCATCTGCGGCACCTCCCT
CGTCCAACGCCGTTGTTCCTGCCACTTATTCCAACCTCAATGACAACGCC
TTGCAGAAACCTTTGCTCGATGCTACTCGTCCCGAGCCCGTTGGGGCCTC
TATTCTTTACGAAGATGACTTCATAAAACTAACAGGGTCTTCACTTCGCA
TCAAATGGTATTATTTTCCCATCGGAGCCTCGAAGGTTATCCCGTTGAAG
AGCATTCAAAAGATATCTTTAAGACCTTTAGGAAGCACGTGGCAAGGCCA
GTACAAACACTGGGGCATGGCCATCGATTTCAAACGCTGGTGGCCGAGCG
ACATGTTGCGCCATCAACGTGTAGGGCGGTTATGGGGAAATGTTTCGGAG
GGATCGGTGCCGCATGGGTTTGGCTCGCTGAATGATGTCCAGCCAACAAT
CAAAAGCACCCGTGCCTTTCATGTGGGACTCTTGGCTTGTCCTTTTTTTA
TCCTTTATCTATCCTTTATCTTGGGAAGTGTCCCTCCTTCATCACGTCGT
CCGGCTTGATTTCCCACCTCTCTCCCCCTAACGCTTTCCCTCGTGCCCGA
CCCGTTACCGCTTCCGTTCATTTCCTCGCTTCCCTGCCTCCATCTCTTTC
CTCTCTCAGGCGCATTTTATCGAGGTCGATTGCGGAACATGGCCCCTCGT
CGCTTTTACGCTCAAAGAATCAGAGGATTTTTACCGTTCTCTCTCCCAGG
CCGTAGCAGCAGTCAGGACGGGTAAAGGAATAATCTAGCAGGCAGACGCG
CAGAGTGGTAGTGCTCTGCCGGGAGTTCCCACTTTGGAGACCCATTTTGG
GCTGTATTTTGAAATGTACCATGTCTTCTGTAAGCAAGCCAGGGGGCACA
GGGAATAGGATTTTTAGCCCCTTCCACGACTTTCCATCCTTATAAAATTG
GCATCGGGAAAGTGCCGACTTATATCTGAAGAATTATAGAATGGGTTGAA
AAATGGACAAGAGCAGGTTGAACACAACCTCCCGCCACCGGGTCTGAAAA
TGTTTTAAAACCCGATCTTACGTACATCACAGAGGCCCTACACAGCACTG
TGGGTGGAACGAGCATGCTGTAAAAATGGGCTGTCTTACACAACAACAAA
AAATTAAACACGTTAGCATGCACCATGCAAAGGCCATGAAAACTTGCAAG
ATCTGCGTGTGCGCTCTTCACGTTCTTATCGCTCGCGGACGCCTCAAGAA
GAAAGTCGAGACTTGTCCGTGATGTTCCACGATCGACCTGCGTCCGTGCA
TGC back to topprotein sequence of rna7147 >rna7147-protein ID=rna7147-protein|Name=rna7147|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MSTYTLFPHPQEGHYTDFWTPLLGYGVIVVMATMTSSFTMHHCRHPFGTF
LRHVLLIAASLPLISSFTPLRPPSTPTFLPSSPIPHFCPSPHPLHLSPAA
SGPSRRESRLYGLFNNKATPSSEPPPKPSLFNRLLGTPRTRTATEKGSGR
KRKLVRKKVKASSTRASSKPIKQDAAGARPGERRATQRSTLQRDNSWDVI
EKQRVPLSSVAIGVGGVAAVGGYFLKRHWAQRNERLITDFVDDMVSSLPP
FLPSSLPPSLPPSLPPSLCRIDRLPLRLSFLVSLFLLGFKTERIGRAWEK
IGHTTFLCRWWWWMREEGNET back to topmRNA from alignment at CM002470.1:559735..561306+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7147 ID=rna7147|Name=rna7147|organism=Nannochloropsis gaditana|type=mRNA|length=1572bp|location=Sequence derived from alignment at CM002470.1:559735..561306+ (Nannochloropsis gaditana)
accgccttcctccccatcgcgCATGTCAACGTACACCTTATTTCCCCATC
CACAGGAGGGGCACTACACGGATTTTTGGACCCCCCTGCTTGGATACGGG
GTGATTGTCGTCATGGCAACCAtgacgtcctccttcaccatgcACCACTG
TAGACATCCTTTTGGGaccttcctccgccatgtGCTGTTGAtagccgcct
ccctcccgctcatctcctccttcacgcctcTCAGACCGCCTTCTACCccg
accttcctcccttcctcccccataCCACATTTTTGCCCTTCTCCACACCC
TCTCCATCTGTCTCCAGCAGCCTCGGGGCCGTCAAGAAGAGAGAGCCGCC
TGTACGGGCTCTTCAACAACAAagccacgccctcttccgaacctcctccc
aagccCAGCCTCTTCAACAGATTGTTGGGCACGCCCAGAACCCGCACGGc
cacggagaaagggagtgggcggAAACGGAAACTGGTGCGTAAGAAGGTTA
AAGCCTCCAGCACCCGAgcgtcctccaagcccatcAAGCAGGACGCCGCG
GGGGCACGAccaggggagaggcgggcgacgCAGCGGTCCACATTGCAGCG
AGATAACTCGGTACGTGCTGCTCAAGTATGTCGACCCAGGAACCGTATAT
CCTTGGTGCCCTGGAGTATGTAGGAAAGGTCTcaagctccctccctccct
tcctccctcccttcctccctccttcccgccctccttttctccccccggcc
cttcgCCTCAGTGGGACGTGATTGAGAAGCAGCGggtccctctttcttcc
gtGGCTATTGGCGTGGGCGGAGTGGCCGCAGTGGGAGGGTATTTCTTGAA
GAGGCACTGGGCACAGCGCAACGAGAGGCTGATCACCGACTTTGTCGACG
ACATGGTATCCTcactcccacccttcctcccttcttccctccctccctcc
ctcccgccctccctccctccctccctctgtcgtatcgatcgccttcctct
ccgcctttccttccttgtaTCCCTTTTTCTGTTGGGCTTTAAAACGGAAA
GGattgggagggcgtgggagaagaTTGGGCATACCACTTTCTTGTGcaga
tggtggtggtggatgagggaggagggaaacgagaCTTGACCCGTCCCTGC
TGAGAATCGAAGAGCGCGATCTATGAGATGCTTTATGCTGCCTGTAAAGA
ACGTTGTCCGCATGCCATCCACGTCGAAATGTGTTTgttcgctttctttc
ctaAGATTTGTCTGTTTttggggcgggggaaaaaaaggcatAGGCCCTTC
AAACGGCGTCTTCTGTCTCTGGCATTCCGTCTACTTCCCTCGGTCCGGTT
GGCGCCAAGAGTCCATGCGCCACTTCAGGAGAAAATGCAGAGTTAAGGTA
TTTGCCTCAAGAGATAATGCAAAGTTAAGGTATTGAGGAGGTGCAAAGTT
AAGATACCTGCAGGCAACGACACGGCTGAGTAGAGCATAACGCAGAAAAC
CACCGCAAGGAGCGGCCAAAGTCAAGCTTCCCAAGCAGCAGAGACAGGCA
GCAATCTCAAGCGGAAACAAGA back to topCoding sequence (CDS) from alignment at CM002470.1:559735..561306+ >rna7147 ID=rna7147|Name=rna7147|organism=Nannochloropsis gaditana|type=CDS|length=1932bp|location=Sequence derived from alignment at CM002470.1:559735..561306+ (Nannochloropsis gaditana)
ATGTCAACGTACACCTTATTTCCCCATCCACAGGAGGGGCACTACACGGA
TTTTTGGACCCCCCTGCTTGGATACGGGGTGATTGTCGTCATGGCAACCA
tgacgtcctccttcaccatgcACCACTGTAGACATCCTTTTGGGaccttc
ctccgccatgtGCTGTTGAtagccgcctccctcccgctcatctcctcctt
cacgcctcTCAGACCGCCTTCTACCccgaccttcctcccttcctccccca
taCCACATTTTTGCCCTTCTCCACACCCTCTCCATCTGTCTCCAGCAGCC
TCGGGGCCGTCAAGAAGAGAGAGCCGCCTGTACGGGCTCTTCAACAACAA
agccacgccctcttccgaacctcctcccaagccCAGCCTCTTCAACAGAT
TGTTGGGCACGCCCAGAACCCGCACGGccacggagaaagggagtgggcgg
AAACGGAAACTGGTGCGTAAGAAGGTTAAAGCCTCCAGCACCCGAgcgtc
ctccaagcccatcAAGCAGGACGCCGCGGGGGCACGAccaggggagaggc
gggcgacgCAGCGGTCCACATTGCAGCGAGATAACTCGTGGGACGTGATT
GAGAAGCAGCGggtccctctttcttccgtGGCTATTGGCGTGGGCGGAGT
GGCCGCAGTGGGAGGGTATTTCTTGAAGAGGCACTGGGCACAGCGCAACG
AGAGGCTGATCACCGACTTTGTCGACGACATGGTATCCTcactcccaccc
ttcctcccttcttccctccctccctccctcccgccctccctccctccctc
cctctgtcgtatcgatcgccttcctctccgcctttccttccttgtaTCCC
TTTTTCTGTTGGGCTTTAAAACGGAAAGGattgggagggcgtgggagaag
aTTGGGCATACCACTTTCTTGTGcagatggtggtggtggatgagggagga
gggaaacgagaCTTGAATGTCAACGTACACCTTATTTCCCCATCCACAGG
AGGGGCACTACACGGATTTTTGGACCCCCCTGCTTGGATACGGGGTGATT
GTCGTCATGGCAACCAtgacgtcctccttcaccatgcACCACTGTAGACA
TCCTTTTGGGaccttcctccgccatgtGCTGTTGAtagccgcctccctcc
cgctcatctcctccttcacgcctcTCAGACCGCCTTCTACCccgaccttc
ctcccttcctcccccataCCACATTTTTGCCCTTCTCCACACCCTCTCCA
TCTGTCTCCAGCAGCCTCGGGGCCGTCAAGAAGAGAGAGCCGCCTGTACG
GGCTCTTCAACAACAAagccacgccctcttccgaacctcctcccaagccC
AGCCTCTTCAACAGATTGTTGGGCACGCCCAGAACCCGCACGGccacgga
gaaagggagtgggcggAAACGGAAACTGGTGCGTAAGAAGGTTAAAGCCT
CCAGCACCCGAgcgtcctccaagcccatcAAGCAGGACGCCGCGGGGGCA
CGAccaggggagaggcgggcgacgCAGCGGTCCACATTGCAGCGAGATAA
CTCGTGGGACGTGATTGAGAAGCAGCGggtccctctttcttccgtGGCTA
TTGGCGTGGGCGGAGTGGCCGCAGTGGGAGGGTATTTCTTGAAGAGGCAC
TGGGCACAGCGCAACGAGAGGCTGATCACCGACTTTGTCGACGACATGGT
ATCCTcactcccacccttcctcccttcttccctccctccctccctcccgc
cctccctccctccctccctctgtcgtatcgatcgccttcctctccgcctt
tccttccttgtaTCCCTTTTTCTGTTGGGCTTTAAAACGGAAAGGattgg
gagggcgtgggagaagaTTGGGCATACCACTTTCTTGTGcagatggtggt
ggtggatgagggaggagggaaacgagaCTTGA back to top
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