rna714, rna714 (mRNA) Nannochloropsis gaditana

Overview
Namerna714
Unique Namerna714
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length3031
Alignment locationCM002456.1:246923..247907 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100567g3.2825.mrna
Orig protein idgnl|cribi|Naga_100567g3.2825
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:246923..247907 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100567g3gene685Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29961.1cds714Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna714rna714-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna714 ID=rna714|Name=rna714|organism=Nannochloropsis gaditana|type=mRNA|length=3031bp
ACACCGCGACCCCAAGCAGTAATTGCCGGCAACCATGTGCCAGGAAAATG
CCTGGTTGCCTGCGCATGACGAATGATACGGGGGGAATCACACTCAGAAC
TGAGGAAGCCATGAGCTTCAAATTAATAGGACGCGGTTGTATTCGACAAT
TAGTGGCTATCGAAGGTGCGCAAGGCGCTTAAGTAACTATTCATTTGTTC
TGAAAGGATAGATCTGTAAAATAATCTCGAAATCTGTGTACATCCATTAT
TGACAGCAATAACTACAAGTGTGCTCAGCATGTTACCCATGCCTTTGATG
TCATCGGCGGCCAAAAGCTTGTCTTTTACCCTCCAGGTTTCCCAATACAA
CATCCTTGCCGCCAACTTGGCCAACAATCTTCGGCCATGGTTCTGGTACG
GATTTCGGGGTGTGTCTCCTACTGTCCCTCATTACACGGGAGACGCCTTT
GACGAAGCTCGCTTTCAAACATTTGGAGCGGGACGCAGCAAGCTTTTTAT
TGACCTCTGGTGTGTGGCTACGAAGTACCTGCGCTTGTTCGATCACGAGC
CCACCAATCCATACCGCATCGACGTCTTGACTCATGCGGATGCAGCGAAG
GATGTGCATACGGAAGGTCCAGCAGTTGCGCTCAAGTGCCTGTTGGAGAC
GGCTACGTTCGATTTTTTTCATCGCAACATCAACAATAATACTCAGGGGA
ACACATATTTGGCCCATTATCTTTTTGATCGGAAGAATCCGGACTTTCAA
GTCGTGGAGCACGCTTTGCTTTTTCCGCTGGGGTACAGTCTTTCTCTGGA
CGATTGGAAAGAAGCCGAAGGCCTCAGGAAAGACATAGACAAGACCCTGG
CAGGCTCGGTGGACCGCGCCGCGGCGATCGACCGTTTTAATGTGTGGTTA
CGTCGGGTCCTCGTACTACGCCGGCGGCATAGTCACCACAAGGGGGTTCT
GGAGCATTTCGAACTGTCGGACGGCCGGATCGAGGAGGAGTTTCGGGAAG
TGGCTCTGGAAATGGCGACATTTATGAGCCTGAGCGCGGCAGACATGGAC
CGGATCTCACGTTTTCAGCATAGAATGGAGTGGAATCTCCGGGGTCCGGC
CATCATGGAGGTGATCGAGGGGCTGCAGGCGGACGTGCTGGGCTTAGAGG
AAGTAGACAAAGTGGAGGACGTGAGGGAGCACCTGGAAGCACGAGGCCTG
CGGATGGCCGTGTACAAACATCGGCATGCACGGGCAACGGGGGACGGCTG
TGCTATATTCTACAATCCCCGTGTTTTGCGCCTGTGCCGGCTCGGAGGCG
TTCCTCAGGAGGAGGAGGAGGCGATTCACGGCGGGGCGCTCGGGGAGATG
GATGGAAAGGGGCCAAGGGCCGTGGCAGTCGTGCGTTACAGTGCAGAAGC
GTACATGGTATGTTCCGAAGAAAAGCACCAACAACATGGACACCACCAAC
CGCATTCCTCTAAAAGAGGAGAATATCAAGGACAATGCCAGCAGCAGCAG
CCAACCGCCAATGGCATCCCTGATTGCCCGACGGCCCGTAGGCGTGGGGA
GGTCGACGCAGATGCCTTACCCCTCTTCCGCTCCACATTAAAGATGCAGG
GGAGGATCGTGGCGGGCGAGACGAGCGACAATGGGGAGGGAGGGGCAGAT
GAGGCAAGCATGTTGAAGGGGCAGGGTGGGGAGGAGGGAGTTTCGGAGGA
TTTCGTGGATTCCTGGACCTTCACGGCACCAGAAGGGTTGACCAGATGCG
AGGGAAAGTCGTGGGACGATTGGGTGGCTGTGGTCGCCTTATTGGAGCAC
CGCGCGACGGGGCAACGACTCTTGACCGTGTGCTCGCAGTTGGCCCACTC
TCCCGAACTGCGGGCGGCGCCAGGGGTGCGGGCAGTCCAGGTCCGGGAAT
TAGAGCGGGCATTGCGAGAAATTCGAAAGGTCTGGGGTCTGGTAGAGACG
GAGGGAGGGGAAAAGGGGGCGGTGGAAAGGCAGGAGCAAAGGAATCGGGC
GTGGGGGCAGGTCCCCACCTTGATCATGATGGACGGAAACGAAGCCCCAT
TCTTAGGCCCGGAAGAGCCTTCTTTGGCAAACGAGGGAAGAACTCCGGAT
GGGCGGACGGGGGAGACGGAGGTCGAGAGAAAGAAGGTTTACACACCTAT
GTATCTTGCGATGAGGGAGGAGATGGGGTATGTGGACGTTTTGGGGGAGG
AGTTCGGTCCCACCAGTATCACCTTGCAAGGCCGGTCTCGGGTCGACTAC
ATTTGGGTCACGGGCGAGGGACAGAGAGTTTCCGGAAAAAAAAGTTGGGA
GACGGGTGACGGGTTGGCGATAGGCAAAGAGAGAAGGGAGGGGGTATTTC
TTGAAGATGTAGATGTCTCCCCTGTCATGGATGTCCGTTTGGCGGGGGAG
GAAGGTGGGCAAATGTTTTTAGTAAGTAAAGGGGAGGAGAGGGAAAAGGC
GGTGTACGGTCTGCCACTGCCAGCCGTAGAGGACCAGGAATGCATCCCCT
CCGATCATGTCCCCGTCTCAGCTAAGCTACGATTTCGGATTGAGAGGTCC
AAGCATGGTGGAAGTGGAAAGAGTAATGACAAGCTGGAAGTATTAAGGGA
AAATTGAGGCAGATCATGGCCTTTTAAATGCCGTACAAATTGCGCGTTTG
TACAGATTGGCCTGTATATTTTGATGAGTTCCTGCCTTGTGTCATCTGTT
AACTATCCAGAGCCGTTCGCAATGTGTTGACATTCAGCTCTTCCCCAGGA
GTCCGGTCTTAAATGGGCAAAGTACGGGGAGTACGCATGCAAGACGATCG
AGATTGCCAATTCGGAAGTCTTAATGTCGCACGAAACCCCCCCAAAAAAA
GAAGTGCCTGAGCACTCGCAATCGTTTATATATACATATATTTGGTACCA
ACTTGCTACAAAGGCTTAATTTTTTCATACTTTTAGTGGCTCATTCGGTA
GTCTAGCTCGACCTGGATGATCCCAGATCCTACAAGCTTGTCATGCGCTA
CTTAACACGAGAAACATTCAAAATAAAACCC
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protein sequence of rna714

>rna714-protein ID=rna714-protein|Name=rna714|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
MARSHAACAADAMGSNFPFHPLEEVMAKRVARVLKWGNLSSTNTLAGLPI
TLSGWSAPMHWTSGASIFRLSCRRDFSSHIVTRFWKNVQDPICHLHIVTL
TTDAGPPRLR
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mRNA from alignment at CM002456.1:246923..247907-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna714 ID=rna714|Name=rna714|organism=Nannochloropsis gaditana|type=mRNA|length=985bp|location=Sequence derived from alignment at CM002456.1:246923..247907- (Nannochloropsis gaditana)
AAATGTAAAAAACATAGAGGTAAAAATTAACCATCAAGATAACCTGCCTC
CCTGTTTTCTCCAGGCGCCTGAGAATATGGTCACATAATTTGTACAGGAC
ACCGATGGAAAGTTCCGCAACTTCCATGAAAACGCAGCGCCATCCGTGTG
CGAACACGACGTCGTGAAATTGCAATAAATCATTCATGGCTTGCGGTGTC
CTGCTGGATTAAGGTGGAAATTCCGTCTCAATTAAGAGATGGCCAGATCG
CATGCCGCATGTGCGGCAGACGCGATGGGATCAAACTTCCCTTTTCATCC
TTTGGAAGAAGTGATGGCAAAGCGCGTCGCGCGAGTCTTGAAGTGGGGCA
ACCTTTCATCCACCAATACGCTAGCCGGACTGCCGATTACTTTGTCAGGC
TGGTCGGCTCCAATGCATTGGACATCGGGAGCAAGCATCTTTCGGTTGAG
CTGTCGGAGAGACTTTAGCTCCCACATAGTCACGCGCTTCTGGAAAAACG
TGCAGGATCCCATTTGTCACCTACATATTGTAACCCTAACAACGGATGCT
GGACCCCCGCGCCTCAGATGACGACTTATTGCGATCAATCGCTCCTCGCA
AATCCCTGAGCGCGTGGTCCACCCCCTGCGCTTCGCATTTCAAAGATCTC
GCATCGTGTTGACTGTCATCTCCTTGATCCGGCAGCGTACAGCCTGCTTC
GAGGGGCTGCGATATTGCTACAAGGGCCTGAGTCTGCTGAAAACGTCGGG
CATTTAGTATCATCCGCGGCGAGCGAAGGATGTCAATGGCCGCAAGGGGA
CTGACTAAGTGTGTATTTCGCTTGCAGCTCGAACAGCTTGATAGTTTGGG
TTTTATTTTGAATGTTTCTCGTGTTAAGTAGCGCATGACAAGCTTGTAGG
ATCTGGGATCATCCAGGTCGAGCTAGACTACCGAATGAGCCACTAAAAGT
ATGAAAAAATTAAGCCTTTGTAGCAAGTTGGTACC
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Coding sequence (CDS) from alignment at CM002456.1:246923..247907-

>rna714 ID=rna714|Name=rna714|organism=Nannochloropsis gaditana|type=CDS|length=333bp|location=Sequence derived from alignment at CM002456.1:246923..247907- (Nannochloropsis gaditana)
ATGGCCAGATCGCATGCCGCATGTGCGGCAGACGCGATGGGATCAAACTT
CCCTTTTCATCCTTTGGAAGAAGTGATGGCAAAGCGCGTCGCGCGAGTCT
TGAAGTGGGGCAACCTTTCATCCACCAATACGCTAGCCGGACTGCCGATT
ACTTTGTCAGGCTGGTCGGCTCCAATGCATTGGACATCGGGAGCAAGCAT
CTTTCGGTTGAGCTGTCGGAGAGACTTTAGCTCCCACATAGTCACGCGCT
TCTGGAAAAACGTGCAGGATCCCATTTGTCACCTACATATTGTAACCCTA
ACAACGGATGCTGGACCCCCGCGCCTCAGATGA
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Synonyms
Publications